| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342196
Identifier: 146342196
GI number: 146342196
Start: 5557351
End: 5557962
Strand: Reverse
Name: 146342196
Synonym: BRADO5348
Alternate gene names: NA
Gene position: 5557962-5557351 (Counterclockwise)
Preceding gene: 146342197
Following gene: 146342194
Centisome position: 74.54
GC content: 63.89
Gene sequence:
>612_bases ATGTCGATCATCACCACCGTTGAGCAACTCGAGGCGATCTACGGCGAGACCGGACTGGCGTCGACGGCCAAGGTCGCCGA TCGGGTGACGCCGCAGTATCGGGTGATGATCGAGAAATCGCCGTTCGTCGCGCTCGCGACATCGGGCCCGGAAGGTCTCG ATTGCTCGCCCCGCGGCGACCGTCCGGGTTTTGTCCGCATTCACGACGACAAGACGCTGATGCTGCCCGACCGGCGCGGC AACAACCGCGTCGATTCATTGCGCAACATCGTGCGCGATCCGCGTATCGGCCTGCTGTTCCTGATTCCGGGATCCGGCAA TACGCTACGCGTCAACGGGCGAGGCCATCTGTCAGCGGATGCGGAGCTGCTCGAATCGTTCCGGATGGAAGGCAAGCTGC CGCGGACGGTGCTCGTGATGACGATCGAGGAGATCTACTTTCAATGCGCCCGCGCCATCGTGCGTTCCGATCTCTGGAAC CCGGACAAGCGCGTCGATCCGCGCGAGATTCCGACACCCGGGCAGATCCTGGCCGCGATGACCGCCAACGCCGTCAACGG CGAAGAGTACGACCGTGAGTGGCCCGAGCGTGCGCGGAAGTCGATGTGGTGA
Upstream 100 bases:
>100_bases AACAATGTCGGCGATCCCGCCACTCACGGACTCAGGCTGATCGAGGTGATCAAGGGATCCGATGCGAGTGCTTCGGCCGA GTTGATGGGAGCTGTGAACG
Downstream 100 bases:
>100_bases GCGCGGAGCTGCGGGCCATCAATGTGATGGGTTGGAGAGACGGCTGGTCAAGCGGCGACGTCGAGCAGGCGCGACGAGCC GCGGATGAGGACCTTCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohydrolase; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; NTP Pyrophosphohydrolase; Pyridoxine Biosynthesis Protein; Phenylacetate-CoA Oxygenase/Reductase PaaK Subunit; Transcriptional Regulator AraC Family; Pyridoxamine 5-Phosphate Oxidase Family; Fmn Flavoprotein; Pyridoxamine 5\-Phosphate Oxidase Family Protein; Ferredoxin; Hydrolase; Pyridoxamine 5-Phosphate Oxidase-Related
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSIITTVEQLEAIYGETGLASTAKVADRVTPQYRVMIEKSPFVALATSGPEGLDCSPRGDRPGFVRIHDDKTLMLPDRRG NNRVDSLRNIVRDPRIGLLFLIPGSGNTLRVNGRGHLSADAELLESFRMEGKLPRTVLVMTIEEIYFQCARAIVRSDLWN PDKRVDPREIPTPGQILAAMTANAVNGEEYDREWPERARKSMW
Sequences:
>Translated_203_residues MSIITTVEQLEAIYGETGLASTAKVADRVTPQYRVMIEKSPFVALATSGPEGLDCSPRGDRPGFVRIHDDKTLMLPDRRG NNRVDSLRNIVRDPRIGLLFLIPGSGNTLRVNGRGHLSADAELLESFRMEGKLPRTVLVMTIEEIYFQCARAIVRSDLWN PDKRVDPREIPTPGQILAAMTANAVNGEEYDREWPERARKSMW >Mature_202_residues SIITTVEQLEAIYGETGLASTAKVADRVTPQYRVMIEKSPFVALATSGPEGLDCSPRGDRPGFVRIHDDKTLMLPDRRGN NRVDSLRNIVRDPRIGLLFLIPGSGNTLRVNGRGHLSADAELLESFRMEGKLPRTVLVMTIEEIYFQCARAIVRSDLWNP DKRVDPREIPTPGQILAAMTANAVNGEEYDREWPERARKSMW
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22776; Mature: 22645
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIITTVEQLEAIYGETGLASTAKVADRVTPQYRVMIEKSPFVALATSGPEGLDCSPRGD CCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCC RPGFVRIHDDKTLMLPDRRGNNRVDSLRNIVRDPRIGLLFLIPGSGNTLRVNGRGHLSAD CCCEEEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCC AELLESFRMEGKLPRTVLVMTIEEIYFQCARAIVRSDLWNPDKRVDPREIPTPGQILAAM HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH TANAVNGEEYDREWPERARKSMW HHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SIITTVEQLEAIYGETGLASTAKVADRVTPQYRVMIEKSPFVALATSGPEGLDCSPRGD CHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCC RPGFVRIHDDKTLMLPDRRGNNRVDSLRNIVRDPRIGLLFLIPGSGNTLRVNGRGHLSAD CCCEEEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCC AELLESFRMEGKLPRTVLVMTIEEIYFQCARAIVRSDLWNPDKRVDPREIPTPGQILAAM HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH TANAVNGEEYDREWPERARKSMW HHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA