| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yfiQ [H]
Identifier: 146342157
GI number: 146342157
Start: 5519110
End: 5521803
Strand: Reverse
Name: yfiQ [H]
Synonym: BRADO5307
Alternate gene names: 146342157
Gene position: 5521803-5519110 (Counterclockwise)
Preceding gene: 146342160
Following gene: 146342154
Centisome position: 74.05
GC content: 62.32
Gene sequence:
>2694_bases ATGTCGACGTACCGTTTGCGGAACCTGCTTTTGCCTCGCTCGATCGCCTTGGTCGGAGGCAGTCCGCGGCAGAACTCGGT GGGACGAGCCATTCTCGACAATATCGTCAAGGCGCGCTTCGAGGGAAAGCTTGGGCTGGTCAATTCACGACACAAGGAGA TCGCCGGGGTCGCCGCCGTGGCAAGCCTCGCTGACTTGTCGTTCGTACCGGAAATCATTGTCATCACGACACCGCCGGCC TCGATTCCGGATCTGATCGAGCGTGCGGGCGCCCTGGGCACCGCCGGGGCGCTCATCATCACATCCGGGCTTGGGCATGG AGATGGCTCTGTGGCCGATCAGGCCGAGCGAGCGGCGCAGAAACACGGCATGCGTCTGGTCGGGCCAAATTGCCTTGGCA TCATGATGCCGACCATCAAGCTCAACGCCAGTTTCTCCGCTCACATGCCCGTTGCAGGCAACCTTGCCTTGATTTCGCAG TCCGGCGCGATCGCTGCCGGAATGGTCGACTGGGCAGCTCAGCGCGGCGTCGGTTTTTCCGGCATCGTCTCGATCGGCGA TCAGTTGGATGTCGATCTGGCGGACCTCCTGGATCACTTTGCCCTGGATGGCGGCACTCGCGCGATCCTTCTCTACATCG AAGCCGTCAAGGATGCGCGTAAATTCATGTCGGCGGCGCGAGCCGCGGCCAGGGTCAAGCCGGTCGTCGTGGTGAAGTCG GGCCGTGGCGCTGTGGGGGCCAAGGCCGCTGCAACTCACACGGGCGCGCTCGCGGGAGCCGATGCGGTCTATGAAGCGGC GTTTCGTCGTGCCGGCGTTCTGCGCGTCTCCGATCTGCGCGAGCTGTTCGACTGCGCCGAGACATTGGGGCGCGTGGAGT CGCCCACTGGCAAGAGTCTCGCGATTCTCACGAATGGCGGCGGAATCGGTGTGCTCGCAATCGATAGGCTGGTCGAACTC GGGGGTATCCCAGCGCTGCTGTCACCGTCCGTTCACGACCGGCTCGACGCGGTACTGCCGCCAACCTGGTCGGGGTCCAA TCCTGTCGATATCGTCGGCGATGCCGATGCAGCCCGCTATACGACCGTGCTCGAGGCGCTTCTGGCAGACCAGGCGAACG ACGCCATTCTCGTGATGAATGTGCAGACTGCGATTGCGTCCGCAAGTGAGATTGCCTCGGCCGTCACCGAGTTTGTCAGC GCTTATCGCAAACAGCACCGGCGTTGGGCCAAGCCGGTGCTCGCGGCATGGGTCGGCGCTGAGCAGCAGGTCATCGAATC CTTGAGCGGCGCGGGCATTCCGAATTATCCCACCGAAGATGACGCCGTTCGCGGCTTCATGCATCTGGTCCGCCACCGGG AGGTCGTCGAGTCGCTCGCGGCAGTGCCGCCGGCGATGCCGAGCTCATTTGCGCCCGACGTCGAGGCCGCTCGTAACATC GTGACCTCAGCGCTCGCCGACGGACGAACCTGGCTCGACCCGGTCGAGATCAGCCGACTGCTGGAAGCCTACGATATTGC GATGGTTCCGACCTTCGCCGCGAGTTCGGTTGACGAGGCGGTTGCCTATGCAAACCAGCTCTTTGCTCAGGGCGCGACCG TCGTGCTCAAGATCCTGTCACGCGACATCGTTCACAAGTCGGACGTCGGCGGTGTCGTTCTCAATCTGACCACCGCAGAA GCTGTCCGCAAGGCAGCCCACGAGATCATGGCGCGCGCCAAGGCGGTCCGGCCCGACGCTCGGATTTCGGGTGTGATCGT ACAGGCCATGGTCGTGCGCGCCAAGGCACGGGAACTGATCATGGGCATTGCCGATGACCCGACCTTTGGGACGGTCATCG TGTTTGGCCGCGGCGGCACCGCCGTCGAGGTCATCAACGACAAGGCACTTGGCTTGCCTCCGCTCGACCTGCATCTCGCG CGCAACTTGATCGAGCGCACGCGGGTCTCCCGATTGCTGCGGGCCTATCGGGACGTGCCGGCGGTCAAGCCAGACGCGGT TGCGATGGTCCTGGTCAAGCTAGCGCAACTCGCAGCCGACGTGCCTGAGATTCGCGAACTCGACATCAATCCGTTATTGG CTGACGAGAGCGGCGTCATGGCGGTCGATGCGCGTGTCGCAGTCGGCAGGGTTCCACGGAAATTCAAAGGAGCGGGTCCG GCCAATTTTGCTGTCCGGCCCTATCCGTCCCAATGGGAGCGGCATCTCCAGGTCAAGGATGGCTGGCGCATCTTTGCACG GCCGATCCGGCCCGAGGACGAACCGATCATCCATGAGCTCCTCAAGCATGTCACGCCCGAGGACCTGCGCTTGCGGTTCT TTGCCCCGATGAAAGAGTTCACTCACGAGTTCATCGCGCGCCTCACCCAGCTCGATTATGCGCGCGCAATGGCCTTTGTC GCGCTCGACGAAGCGACAAATGAGCTGGTCGGCGTCGTCAGGATTCACTCCGACTCGATCTATGAGAGCGGAGAGTACGC CATTTTGTTGCGATCGGATCTGAAAGGGAGGGGACTTGGCTGGGCCTTGATGCAACTGATCATCGAATATGCCAAGGCGG AGGGCCTCAAAATGATCTCCGGCGATGTGCTGCAGGAGAACATCGTCATGCTGGAAATGTGCAGAAATCTCGGCTTCGAG GTCAAGACCGATCCGACCGAGCGCGATCTCTGCAACGTGAAGCTGAGACTTTAG
Upstream 100 bases:
>100_bases TGTCTGCTTGAGATGATAAGTCGCGCTGGACCCGCGGCGGATTGAAACTAAGATGCCTGTGCGGGAATTGGCCGCCGTCC GCGGGCTGATGGATAGCGAC
Downstream 100 bases:
>100_bases GCGACTCGTTCAGCCGAGGCGGCAAAGCGGTCAAGTCGCGGGCGGGCCATCGGATGGTGGACTCGCCGGATCGCTCATGG ACGAGGCGTGCGAACGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 897; Mature: 896
Protein sequence:
>897_residues MSTYRLRNLLLPRSIALVGGSPRQNSVGRAILDNIVKARFEGKLGLVNSRHKEIAGVAAVASLADLSFVPEIIVITTPPA SIPDLIERAGALGTAGALIITSGLGHGDGSVADQAERAAQKHGMRLVGPNCLGIMMPTIKLNASFSAHMPVAGNLALISQ SGAIAAGMVDWAAQRGVGFSGIVSIGDQLDVDLADLLDHFALDGGTRAILLYIEAVKDARKFMSAARAAARVKPVVVVKS GRGAVGAKAAATHTGALAGADAVYEAAFRRAGVLRVSDLRELFDCAETLGRVESPTGKSLAILTNGGGIGVLAIDRLVEL GGIPALLSPSVHDRLDAVLPPTWSGSNPVDIVGDADAARYTTVLEALLADQANDAILVMNVQTAIASASEIASAVTEFVS AYRKQHRRWAKPVLAAWVGAEQQVIESLSGAGIPNYPTEDDAVRGFMHLVRHREVVESLAAVPPAMPSSFAPDVEAARNI VTSALADGRTWLDPVEISRLLEAYDIAMVPTFAASSVDEAVAYANQLFAQGATVVLKILSRDIVHKSDVGGVVLNLTTAE AVRKAAHEIMARAKAVRPDARISGVIVQAMVVRAKARELIMGIADDPTFGTVIVFGRGGTAVEVINDKALGLPPLDLHLA RNLIERTRVSRLLRAYRDVPAVKPDAVAMVLVKLAQLAADVPEIRELDINPLLADESGVMAVDARVAVGRVPRKFKGAGP ANFAVRPYPSQWERHLQVKDGWRIFARPIRPEDEPIIHELLKHVTPEDLRLRFFAPMKEFTHEFIARLTQLDYARAMAFV ALDEATNELVGVVRIHSDSIYESGEYAILLRSDLKGRGLGWALMQLIIEYAKAEGLKMISGDVLQENIVMLEMCRNLGFE VKTDPTERDLCNVKLRL
Sequences:
>Translated_897_residues MSTYRLRNLLLPRSIALVGGSPRQNSVGRAILDNIVKARFEGKLGLVNSRHKEIAGVAAVASLADLSFVPEIIVITTPPA SIPDLIERAGALGTAGALIITSGLGHGDGSVADQAERAAQKHGMRLVGPNCLGIMMPTIKLNASFSAHMPVAGNLALISQ SGAIAAGMVDWAAQRGVGFSGIVSIGDQLDVDLADLLDHFALDGGTRAILLYIEAVKDARKFMSAARAAARVKPVVVVKS GRGAVGAKAAATHTGALAGADAVYEAAFRRAGVLRVSDLRELFDCAETLGRVESPTGKSLAILTNGGGIGVLAIDRLVEL GGIPALLSPSVHDRLDAVLPPTWSGSNPVDIVGDADAARYTTVLEALLADQANDAILVMNVQTAIASASEIASAVTEFVS AYRKQHRRWAKPVLAAWVGAEQQVIESLSGAGIPNYPTEDDAVRGFMHLVRHREVVESLAAVPPAMPSSFAPDVEAARNI VTSALADGRTWLDPVEISRLLEAYDIAMVPTFAASSVDEAVAYANQLFAQGATVVLKILSRDIVHKSDVGGVVLNLTTAE AVRKAAHEIMARAKAVRPDARISGVIVQAMVVRAKARELIMGIADDPTFGTVIVFGRGGTAVEVINDKALGLPPLDLHLA RNLIERTRVSRLLRAYRDVPAVKPDAVAMVLVKLAQLAADVPEIRELDINPLLADESGVMAVDARVAVGRVPRKFKGAGP ANFAVRPYPSQWERHLQVKDGWRIFARPIRPEDEPIIHELLKHVTPEDLRLRFFAPMKEFTHEFIARLTQLDYARAMAFV ALDEATNELVGVVRIHSDSIYESGEYAILLRSDLKGRGLGWALMQLIIEYAKAEGLKMISGDVLQENIVMLEMCRNLGFE VKTDPTERDLCNVKLRL >Mature_896_residues STYRLRNLLLPRSIALVGGSPRQNSVGRAILDNIVKARFEGKLGLVNSRHKEIAGVAAVASLADLSFVPEIIVITTPPAS IPDLIERAGALGTAGALIITSGLGHGDGSVADQAERAAQKHGMRLVGPNCLGIMMPTIKLNASFSAHMPVAGNLALISQS GAIAAGMVDWAAQRGVGFSGIVSIGDQLDVDLADLLDHFALDGGTRAILLYIEAVKDARKFMSAARAAARVKPVVVVKSG RGAVGAKAAATHTGALAGADAVYEAAFRRAGVLRVSDLRELFDCAETLGRVESPTGKSLAILTNGGGIGVLAIDRLVELG GIPALLSPSVHDRLDAVLPPTWSGSNPVDIVGDADAARYTTVLEALLADQANDAILVMNVQTAIASASEIASAVTEFVSA YRKQHRRWAKPVLAAWVGAEQQVIESLSGAGIPNYPTEDDAVRGFMHLVRHREVVESLAAVPPAMPSSFAPDVEAARNIV TSALADGRTWLDPVEISRLLEAYDIAMVPTFAASSVDEAVAYANQLFAQGATVVLKILSRDIVHKSDVGGVVLNLTTAEA VRKAAHEIMARAKAVRPDARISGVIVQAMVVRAKARELIMGIADDPTFGTVIVFGRGGTAVEVINDKALGLPPLDLHLAR NLIERTRVSRLLRAYRDVPAVKPDAVAMVLVKLAQLAADVPEIRELDINPLLADESGVMAVDARVAVGRVPRKFKGAGPA NFAVRPYPSQWERHLQVKDGWRIFARPIRPEDEPIIHELLKHVTPEDLRLRFFAPMKEFTHEFIARLTQLDYARAMAFVA LDEATNELVGVVRIHSDSIYESGEYAILLRSDLKGRGLGWALMQLIIEYAKAEGLKMISGDVLQENIVMLEMCRNLGFEV KTDPTERDLCNVKLRL
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=887, Percent_Identity=39.3461104847802, Blast_Score=570, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 95927; Mature: 95796
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYRLRNLLLPRSIALVGGSPRQNSVGRAILDNIVKARFEGKLGLVNSRHKEIAGVAAV CCCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ASLADLSFVPEIIVITTPPASIPDLIERAGALGTAGALIITSGLGHGDGSVADQAERAAQ HHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH KHGMRLVGPNCLGIMMPTIKLNASFSAHMPVAGNLALISQSGAIAAGMVDWAAQRGVGFS HCCCEEECCCEEEEEECEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCH GIVSIGDQLDVDLADLLDHFALDGGTRAILLYIEAVKDARKFMSAARAAARVKPVVVVKS HHHHCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC GRGAVGAKAAATHTGALAGADAVYEAAFRRAGVLRVSDLRELFDCAETLGRVESPTGKSL CCCCCCCCHHHHCCCCHHCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCEE AILTNGGGIGVLAIDRLVELGGIPALLSPSVHDRLDAVLPPTWSGSNPVDIVGDADAARY EEEECCCCEEHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCCCCCCCCEEEECCCCHHHH TTVLEALLADQANDAILVMNVQTAIASASEIASAVTEFVSAYRKQHRRWAKPVLAAWVGA HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EQQVIESLSGAGIPNYPTEDDAVRGFMHLVRHREVVESLAAVPPAMPSSFAPDVEAARNI HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH VTSALADGRTWLDPVEISRLLEAYDIAMVPTFAASSVDEAVAYANQLFAQGATVVLKILS HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RDIVHKSDVGGVVLNLTTAEAVRKAAHEIMARAKAVRPDARISGVIVQAMVVRAKARELI HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MGIADDPTFGTVIVFGRGGTAVEVINDKALGLPPLDLHLARNLIERTRVSRLLRAYRDVP EECCCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC AVKPDAVAMVLVKLAQLAADVPEIRELDINPLLADESGVMAVDARVAVGRVPRKFKGAGP CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCEEEEECHHHHCCCCHHHCCCCC ANFAVRPYPSQWERHLQVKDGWRIFARPIRPEDEPIIHELLKHVTPEDLRLRFFAPMKEF CCCCCCCCCHHHHHCEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHEEEEEHHHHHH THEFIARLTQLDYARAMAFVALDEATNELVGVVRIHSDSIYESGEYAILLRSDLKGRGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEECCCCCCCHH WALMQLIIEYAKAEGLKMISGDVLQENIVMLEMCRNLGFEVKTDPTERDLCNVKLRL HHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEC >Mature Secondary Structure STYRLRNLLLPRSIALVGGSPRQNSVGRAILDNIVKARFEGKLGLVNSRHKEIAGVAAV CCHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ASLADLSFVPEIIVITTPPASIPDLIERAGALGTAGALIITSGLGHGDGSVADQAERAAQ HHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH KHGMRLVGPNCLGIMMPTIKLNASFSAHMPVAGNLALISQSGAIAAGMVDWAAQRGVGFS HCCCEEECCCEEEEEECEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCH GIVSIGDQLDVDLADLLDHFALDGGTRAILLYIEAVKDARKFMSAARAAARVKPVVVVKS HHHHCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC GRGAVGAKAAATHTGALAGADAVYEAAFRRAGVLRVSDLRELFDCAETLGRVESPTGKSL CCCCCCCCHHHHCCCCHHCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCEE AILTNGGGIGVLAIDRLVELGGIPALLSPSVHDRLDAVLPPTWSGSNPVDIVGDADAARY EEEECCCCEEHHHHHHHHHHCCCCHHCCCCHHHHHHHCCCCCCCCCCCEEEECCCCHHHH TTVLEALLADQANDAILVMNVQTAIASASEIASAVTEFVSAYRKQHRRWAKPVLAAWVGA HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EQQVIESLSGAGIPNYPTEDDAVRGFMHLVRHREVVESLAAVPPAMPSSFAPDVEAARNI HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH VTSALADGRTWLDPVEISRLLEAYDIAMVPTFAASSVDEAVAYANQLFAQGATVVLKILS HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RDIVHKSDVGGVVLNLTTAEAVRKAAHEIMARAKAVRPDARISGVIVQAMVVRAKARELI HHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MGIADDPTFGTVIVFGRGGTAVEVINDKALGLPPLDLHLARNLIERTRVSRLLRAYRDVP EECCCCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC AVKPDAVAMVLVKLAQLAADVPEIRELDINPLLADESGVMAVDARVAVGRVPRKFKGAGP CCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCEEEEECHHHHCCCCHHHCCCCC ANFAVRPYPSQWERHLQVKDGWRIFARPIRPEDEPIIHELLKHVTPEDLRLRFFAPMKEF CCCCCCCCCHHHHHCEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCHHEEEEEHHHHHH THEFIARLTQLDYARAMAFVALDEATNELVGVVRIHSDSIYESGEYAILLRSDLKGRGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEECCCCCCCHH WALMQLIIEYAKAEGLKMISGDVLQENIVMLEMCRNLGFEVKTDPTERDLCNVKLRL HHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]