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The map label for this gene is yiiZ [H]

Identifier: 146342146

GI number: 146342146

Start: 5509644

End: 5510618

Strand: Direct

Name: yiiZ [H]

Synonym: BRADO5295

Alternate gene names: 146342146

Gene position: 5509644-5510618 (Clockwise)

Preceding gene: 146342145

Following gene: 146342147

Centisome position: 73.89

GC content: 59.59

Gene sequence:

>975_bases
TTGACCGCAGGCATCGCCGGTGCAACGGCGCTTCCACCGTTTTCAGCGGCGCTCGCGCAATCGAAGGCCGTATTCAAGGC
GTCTGACGTGCAGCCTCCCGGCTATCCGACGGTTGCGGCAACCGAAAGCCTCGGCAAGAAGCTCGCAGCCGCGACCAATG
GCAGGCTGACGATCCAGATGTATCCTTCCGCACAGCTTGGCGGCGAGAAGGAAACCATCGAGCAGACCCAGATCGGCGCG
ATCCAGATGCTGCGCGTCAGCGCCGGCGCGCTGGGCCCGATCGTGGACGACATCAACGTCGTCAACATGCCATTCTTGTT
CAAAAGCATCGAGCATTCCGAGAAGATGATGGACGGACCGATCGGGCAGGATCTCCTCGATCGCGTGAGCGCCAATGCAA
ACGCAAACCTGGTGGCGCTCTGCTGGATGAATTCGGGTGCGCGCAGCATCTACAACACCAAGAAGCCGATCAGGACGGTC
GAGGACGTCAAGGGCCTGAAGATCCGCGTCATCGGAAATCCGATCTTCATCGACATGATGAACGCGCTGGGTGGCAACGG
CGTGGCCATGGGCTACGATCAGGTCTTCAGCGCCTTGCAGACCGGCGTGATCGACGGAGCCGAGAACAATCCTCCGAGCT
ACGTCTTCAGCAATCACTATACGGCCGCTAAGTATTATTCGCTGACTCAGCATCTCGTCATCCCGGAAGTCCTCGTGTTC
TCGAAACGAGCCTGGGCGAACCTCTCCAATGACGACCAGGCACTGATCAAGAAGTTCGCGCGCGAAGCTCAGATGGAAGA
GCGCGAACTCTGGAAGGCTTACGAGCGCGAGGCCATGGAGAAGGCCAAGGCGGCCGGCTGCGAGGTCATCGAGATCGCCG
ACAAGGCGCCGTTCCAGAAGGCCGTCAAGCCGGTCTGGGACAAATACGGCCCGAAATACCAGGACATGATCAAGCGCATC
CAAGAAATCGCCTAG

Upstream 100 bases:

>100_bases
ACCAACCGAGCTAGCAATTGCAGCCGCGGCATCCACTGCGGTCTGTCGACCAGGCAAAGTCCGTGGGAGGGACGCCATGA
AGAGACGTGATTTCATCAAA

Downstream 100 bases:

>100_bases
GGCGATCTCGGTCGGACAATCAGGAGGTTTGCCATGGCCGGACTCTATCGCCGAGCGATGGATGCGCTCTATCTCGCCTG
CGTCATCGTGGGCGTGATAG

Product: putative TRAP-type C4-dicarboxylate transport system binding periplasmic protein DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTAGIAGATALPPFSAALAQSKAVFKASDVQPPGYPTVAATESLGKKLAAATNGRLTIQMYPSAQLGGEKETIEQTQIGA
IQMLRVSAGALGPIVDDINVVNMPFLFKSIEHSEKMMDGPIGQDLLDRVSANANANLVALCWMNSGARSIYNTKKPIRTV
EDVKGLKIRVIGNPIFIDMMNALGGNGVAMGYDQVFSALQTGVIDGAENNPPSYVFSNHYTAAKYYSLTQHLVIPEVLVF
SKRAWANLSNDDQALIKKFAREAQMEERELWKAYEREAMEKAKAAGCEVIEIADKAPFQKAVKPVWDKYGPKYQDMIKRI
QEIA

Sequences:

>Translated_324_residues
MTAGIAGATALPPFSAALAQSKAVFKASDVQPPGYPTVAATESLGKKLAAATNGRLTIQMYPSAQLGGEKETIEQTQIGA
IQMLRVSAGALGPIVDDINVVNMPFLFKSIEHSEKMMDGPIGQDLLDRVSANANANLVALCWMNSGARSIYNTKKPIRTV
EDVKGLKIRVIGNPIFIDMMNALGGNGVAMGYDQVFSALQTGVIDGAENNPPSYVFSNHYTAAKYYSLTQHLVIPEVLVF
SKRAWANLSNDDQALIKKFAREAQMEERELWKAYEREAMEKAKAAGCEVIEIADKAPFQKAVKPVWDKYGPKYQDMIKRI
QEIA
>Mature_323_residues
TAGIAGATALPPFSAALAQSKAVFKASDVQPPGYPTVAATESLGKKLAAATNGRLTIQMYPSAQLGGEKETIEQTQIGAI
QMLRVSAGALGPIVDDINVVNMPFLFKSIEHSEKMMDGPIGQDLLDRVSANANANLVALCWMNSGARSIYNTKKPIRTVE
DVKGLKIRVIGNPIFIDMMNALGGNGVAMGYDQVFSALQTGVIDGAENNPPSYVFSNHYTAAKYYSLTQHLVIPEVLVFS
KRAWANLSNDDQALIKKFAREAQMEERELWKAYEREAMEKAKAAGCEVIEIADKAPFQKAVKPVWDKYGPKYQDMIKRIQ
EIA

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=289, Percent_Identity=28.719723183391, Blast_Score=132, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35290; Mature: 35159

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGIAGATALPPFSAALAQSKAVFKASDVQPPGYPTVAATESLGKKLAAATNGRLTIQM
CCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
YPSAQLGGEKETIEQTQIGAIQMLRVSAGALGPIVDDINVVNMPFLFKSIEHSEKMMDGP
CCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCC
IGQDLLDRVSANANANLVALCWMNSGARSIYNTKKPIRTVEDVKGLKIRVIGNPIFIDMM
CCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHCCCCEEEEECCHHHHHHH
NALGGNGVAMGYDQVFSALQTGVIDGAENNPPSYVFSNHYTAAKYYSLTQHLVIPEVLVF
HHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
SKRAWANLSNDDQALIKKFAREAQMEERELWKAYEREAMEKAKAAGCEVIEIADKAPFQK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
AVKPVWDKYGPKYQDMIKRIQEIA
HHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TAGIAGATALPPFSAALAQSKAVFKASDVQPPGYPTVAATESLGKKLAAATNGRLTIQM
CCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
YPSAQLGGEKETIEQTQIGAIQMLRVSAGALGPIVDDINVVNMPFLFKSIEHSEKMMDGP
CCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCC
IGQDLLDRVSANANANLVALCWMNSGARSIYNTKKPIRTVEDVKGLKIRVIGNPIFIDMM
CCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHCCCCEEEEECCHHHHHHH
NALGGNGVAMGYDQVFSALQTGVIDGAENNPPSYVFSNHYTAAKYYSLTQHLVIPEVLVF
HHCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
SKRAWANLSNDDQALIKKFAREAQMEERELWKAYEREAMEKAKAAGCEVIEIADKAPFQK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
AVKPVWDKYGPKYQDMIKRIQEIA
HHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]