| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is sgaA [H]
Identifier: 146342130
GI number: 146342130
Start: 5487977
End: 5489164
Strand: Reverse
Name: sgaA [H]
Synonym: BRADO5277
Alternate gene names: 146342130
Gene position: 5489164-5487977 (Counterclockwise)
Preceding gene: 146342131
Following gene: 146342129
Centisome position: 73.61
GC content: 66.84
Gene sequence:
>1188_bases GTGCACACAGGACGGCATTTTCTTCAGATTCCGGGGCCGACCAACGTGCCCGATCGCGTGCTACGCGCGATGGACATGCC GACGCTGGACCATCGCGGTCCGGAGTTCGCCGAGCTCGGCTTCGCCGTGCTCGCCGCCAGCCAGCGCATCTTCCGCACCA AGCAGCCGGTGGTCATCTATCCGTCGTCCGGCACCGGCGCGTGGGAAGCGGCCATCGTCAACACGCTGGCGCCCGGCGAC AAGGTGCTGATGGCCGAGACCGGCCAGTTCGCCGTGTTGTGGAAGGCGATCGCCGACAAGTTCAAGCTCGATGTCGATTT CATCGCGGGCGACTGGCGGCATGGCGCCGACATTGCCGCGATCGAGCAGCGCCTCGTCGCGGACAAGGCGCACAAGATCA AGGCCGTCTGCGTCGTGCACAACGAGACCTCGACCGGCTGCCTCACGCCGCCGCTGGACGTGCGCAAGGCGCTCGATCGC GCCGGCCATCCGGCGCTGCTGATGGTCGACACCATCTCAGGTCTCGGCTCGATGGAGTATGAGCACGACGCCTGGGGCAT CGACGTCTCCGTCGCCGGCTCGCAGAAGGGCCTGATGCTGCCTCCGGGCCTCGGCTTCAACGCCGTCTCCGAGAAGGCGC TGGCCGTCGCCAAGGCCAACCCCGGCATGCGCTCGTACTGGGACTGGCAGGAGGTCATCAGCTTCAACAAGCTCGGCACC TTCCCCTACACGCCGGCCTGCAATCTGCTGATGGGCCTCAACGAGGCGCTCAAGATGCTGGAGGAGGAGGGCCACGAGAA CGTGTTCGCGCGTCACCGCCGCCATAGCCTGGCGACGCGCGCGGCCGTCAAGGCCTGGGGCCTGGACACGCAGTGCCAGG ATCCGCAGGCGCATTCGCCGGCGCTGACCGGCGTCGTCATGCCCGAGGGCCATGACGCCGATGCGTTCCGCAAGACCGTG CTCGAGAACTTCGACATGTCGCTCGGTACCGGCCTCAACAAGATCAAGGGCAAGGTGTTCCGCATCGGCCACATCGGTCA CTTCAATGACCTGATGCTGATGGGGACACTGTCCGGCGTCGAGATGGGCCTCGCGCTCGCCAATGTCCCGCATCGCGCCG GTGGCGTGCTCGCGGCGATGGATGTCCTCAAGGCGCGCGAGGCTGCGCCGATTCCGAAGGTGGCCTGA
Upstream 100 bases:
>100_bases TTTATTGACGCCAGCGGTCTGGCGGGAGAAAAGCGCGGCGAGCGCGTGGGATGCCACGTCCGCGCACCAACCAAATGACC GGGGATGGACGCCAATGACT
Downstream 100 bases:
>100_bases TGAGCGCTCCTGCGACCGGATCCGACGATCTCCTCTATGCCGTCGACGACGGCATCGCCAAGATCACCTTCAACCGGCCG CAGGCGCGCAACGCGATGAC
Product: serine-glyoxylate aminotransferase
Products: NA
Alternate protein names: SGAT [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MHTGRHFLQIPGPTNVPDRVLRAMDMPTLDHRGPEFAELGFAVLAASQRIFRTKQPVVIYPSSGTGAWEAAIVNTLAPGD KVLMAETGQFAVLWKAIADKFKLDVDFIAGDWRHGADIAAIEQRLVADKAHKIKAVCVVHNETSTGCLTPPLDVRKALDR AGHPALLMVDTISGLGSMEYEHDAWGIDVSVAGSQKGLMLPPGLGFNAVSEKALAVAKANPGMRSYWDWQEVISFNKLGT FPYTPACNLLMGLNEALKMLEEEGHENVFARHRRHSLATRAAVKAWGLDTQCQDPQAHSPALTGVVMPEGHDADAFRKTV LENFDMSLGTGLNKIKGKVFRIGHIGHFNDLMLMGTLSGVEMGLALANVPHRAGGVLAAMDVLKAREAAPIPKVA
Sequences:
>Translated_395_residues MHTGRHFLQIPGPTNVPDRVLRAMDMPTLDHRGPEFAELGFAVLAASQRIFRTKQPVVIYPSSGTGAWEAAIVNTLAPGD KVLMAETGQFAVLWKAIADKFKLDVDFIAGDWRHGADIAAIEQRLVADKAHKIKAVCVVHNETSTGCLTPPLDVRKALDR AGHPALLMVDTISGLGSMEYEHDAWGIDVSVAGSQKGLMLPPGLGFNAVSEKALAVAKANPGMRSYWDWQEVISFNKLGT FPYTPACNLLMGLNEALKMLEEEGHENVFARHRRHSLATRAAVKAWGLDTQCQDPQAHSPALTGVVMPEGHDADAFRKTV LENFDMSLGTGLNKIKGKVFRIGHIGHFNDLMLMGTLSGVEMGLALANVPHRAGGVLAAMDVLKAREAAPIPKVA >Mature_395_residues MHTGRHFLQIPGPTNVPDRVLRAMDMPTLDHRGPEFAELGFAVLAASQRIFRTKQPVVIYPSSGTGAWEAAIVNTLAPGD KVLMAETGQFAVLWKAIADKFKLDVDFIAGDWRHGADIAAIEQRLVADKAHKIKAVCVVHNETSTGCLTPPLDVRKALDR AGHPALLMVDTISGLGSMEYEHDAWGIDVSVAGSQKGLMLPPGLGFNAVSEKALAVAKANPGMRSYWDWQEVISFNKLGT FPYTPACNLLMGLNEALKMLEEEGHENVFARHRRHSLATRAAVKAWGLDTQCQDPQAHSPALTGVVMPEGHDADAFRKTV LENFDMSLGTGLNKIKGKVFRIGHIGHFNDLMLMGTLSGVEMGLALANVPHRAGGVLAAMDVLKAREAAPIPKVA
Specific function: Unknown
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=344, Percent_Identity=29.3604651162791, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17536281, Length=345, Percent_Identity=28.695652173913, Blast_Score=121, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6321079, Length=361, Percent_Identity=27.9778393351801, Blast_Score=113, Evalue=5e-26, Organism=Drosophila melanogaster, GI17530823, Length=366, Percent_Identity=28.1420765027322, Blast_Score=122, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.45 [H]
Molecular weight: Translated: 42681; Mature: 42681
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTGRHFLQIPGPTNVPDRVLRAMDMPTLDHRGPEFAELGFAVLAASQRIFRTKQPVVIY CCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE PSSGTGAWEAAIVNTLAPGDKVLMAETGQFAVLWKAIADKFKLDVDFIAGDWRHGADIAA ECCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHHH IEQRLVADKAHKIKAVCVVHNETSTGCLTPPLDVRKALDRAGHPALLMVDTISGLGSMEY HHHHHHHHHHHCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC EHDAWGIDVSVAGSQKGLMLPPGLGFNAVSEKALAVAKANPGMRSYWDWQEVISFNKLGT CCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCC FPYTPACNLLMGLNEALKMLEEEGHENVFARHRRHSLATRAAVKAWGLDTQCQDPQAHSP CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ALTGVVMPEGHDADAFRKTVLENFDMSLGTGLNKIKGKVFRIGHIGHFNDLMLMGTLSGV CEEEEECCCCCCHHHHHHHHHHHCCCHHHCCHHHHCCEEEEEECCCCCCCEEEEEEHHHH EMGLALANVPHRAGGVLAAMDVLKAREAAPIPKVA HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHTGRHFLQIPGPTNVPDRVLRAMDMPTLDHRGPEFAELGFAVLAASQRIFRTKQPVVIY CCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE PSSGTGAWEAAIVNTLAPGDKVLMAETGQFAVLWKAIADKFKLDVDFIAGDWRHGADIAA ECCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHHH IEQRLVADKAHKIKAVCVVHNETSTGCLTPPLDVRKALDRAGHPALLMVDTISGLGSMEY HHHHHHHHHHHCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCC EHDAWGIDVSVAGSQKGLMLPPGLGFNAVSEKALAVAKANPGMRSYWDWQEVISFNKLGT CCCCCEEEEEECCCCCCEECCCCCCCCHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCC FPYTPACNLLMGLNEALKMLEEEGHENVFARHRRHSLATRAAVKAWGLDTQCQDPQAHSP CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ALTGVVMPEGHDADAFRKTVLENFDMSLGTGLNKIKGKVFRIGHIGHFNDLMLMGTLSGV CEEEEECCCCCCHHHHHHHHHHHCCCHHHCCHHHHCCEEEEEECCCCCCCEEEEEEHHHH EMGLALANVPHRAGGVLAAMDVLKAREAAPIPKVA HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8144463 [H]