Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is yxjG [H]
Identifier: 146342105
GI number: 146342105
Start: 5460825
End: 5461943
Strand: Reverse
Name: yxjG [H]
Synonym: BRADO5249
Alternate gene names: 146342105
Gene position: 5461943-5460825 (Counterclockwise)
Preceding gene: 146342106
Following gene: 146342103
Centisome position: 73.25
GC content: 63.63
Gene sequence:
>1119_bases ATGCAACGCACCAAGCCCCCCTTCCGCGCCGACGAAGTCGGCAGCCTCTTGCGCCCGCAGAAGATCAAGGAGGCCCGCGC CAAGCTCGAGAAGGGCGAGATCTCCGCGGCTGACCTCGCCAAGATCGAGGATATGGAGATCGAGAAGGTCGTGCACCGCC AGGCCTCGACCGGCCTGAAGCTCGCGACCGACGGCGAGTTTCGCCGCTCCTGGTGGCACTTTGATTTCCTCGCCAAGCTG ACCGGCTGCGAGCTGTTCCACCCCGACACCGGCATCCAGTTCACCGGCGTTCAGACCCGTCACGACGCGGTGCGTGTGAT CGGCAAGCTGGACTTTCCCGATACTCATCCGATGCTCGACCACTTCCGCTTCCTCAAGAAGCACGCCGACACCGCGCATG TGACGGCGAAGATGACGATCCCGTCGCCGGCCGTGCTGCATTTCCGCGGCGGCCGCAAGTCGATCTCGAAAGAGGTCTAT CCCGATCTCGACGCCTTCTACGAGGATCTCGGCAAGACCTACCGCAAGGCCGTGAAGGCCTTTTATGACGCCGGCTGCCG CTATCTGCAGTTCGACGACACCGTGTGGGCCTATCTCTGCTCGCAGGACGAGCTGAAGAAGGCCAGGGAGCGCGGCGACA ATCCGGACGGCTTGCAGCAGATCTACTCGCGCATCATCAACTATGCGATCGCCGAGCGTCCCGCCGACATGACGATCACG ACCCATGTCTGCCGCGGCAATTTCCGCTCGACCTGGATCTCCTCGGGCGGCTACGAGCCGGTTGCCGAGACCATGCTCGC CAACACCAACTATGACGGCTACTTCCTGGAGTATGACAGCGAGCGCGCAGGCGGCTTCGAGCCGCTGCGCTTCCTGCCGA AGGGCAACAAGGTCGTCGTCGTCGGTCTCGTCACCTCGAAGGTCGGCGAGCTCGAGAAGAAGGACGACATCAAGCGCCGC CTGGAGGAGGCCTCGAAGTTCGCGCCGCTCGATCAGCTCGCGCTGTCCCCGCAATGCGGCTTCGCCTCGACCGAGGAAGG CAACATCCTGAGCGAGGAAGAGCAGTGGGCCAAGCTGCGCCTCTGCGTCGAGCTCGCCGAGGAGATCTGGGGGAAGTAA
Upstream 100 bases:
>100_bases GGACGCGCGTGTGCCGGCCACGGGACCGCTCGTTCGGGTAGAACAGTTAACCGGTCGATCGCTCAGATCCAAGACGTCGA GCATTCCAAGGAGTGAAGAG
Downstream 100 bases:
>100_bases GAGGCTCGCGACCTACGCTCGTCTGATCAGGCCGGATCGGTTTATCCCGATCCGGCCTTCTGTTTTGAAGACCTGACGAT TCACGCCAATAGGGCTTTGG
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MQRTKPPFRADEVGSLLRPQKIKEARAKLEKGEISAADLAKIEDMEIEKVVHRQASTGLKLATDGEFRRSWWHFDFLAKL TGCELFHPDTGIQFTGVQTRHDAVRVIGKLDFPDTHPMLDHFRFLKKHADTAHVTAKMTIPSPAVLHFRGGRKSISKEVY PDLDAFYEDLGKTYRKAVKAFYDAGCRYLQFDDTVWAYLCSQDELKKARERGDNPDGLQQIYSRIINYAIAERPADMTIT THVCRGNFRSTWISSGGYEPVAETMLANTNYDGYFLEYDSERAGGFEPLRFLPKGNKVVVVGLVTSKVGELEKKDDIKRR LEEASKFAPLDQLALSPQCGFASTEEGNILSEEEQWAKLRLCVELAEEIWGK
Sequences:
>Translated_372_residues MQRTKPPFRADEVGSLLRPQKIKEARAKLEKGEISAADLAKIEDMEIEKVVHRQASTGLKLATDGEFRRSWWHFDFLAKL TGCELFHPDTGIQFTGVQTRHDAVRVIGKLDFPDTHPMLDHFRFLKKHADTAHVTAKMTIPSPAVLHFRGGRKSISKEVY PDLDAFYEDLGKTYRKAVKAFYDAGCRYLQFDDTVWAYLCSQDELKKARERGDNPDGLQQIYSRIINYAIAERPADMTIT THVCRGNFRSTWISSGGYEPVAETMLANTNYDGYFLEYDSERAGGFEPLRFLPKGNKVVVVGLVTSKVGELEKKDDIKRR LEEASKFAPLDQLALSPQCGFASTEEGNILSEEEQWAKLRLCVELAEEIWGK >Mature_372_residues MQRTKPPFRADEVGSLLRPQKIKEARAKLEKGEISAADLAKIEDMEIEKVVHRQASTGLKLATDGEFRRSWWHFDFLAKL TGCELFHPDTGIQFTGVQTRHDAVRVIGKLDFPDTHPMLDHFRFLKKHADTAHVTAKMTIPSPAVLHFRGGRKSISKEVY PDLDAFYEDLGKTYRKAVKAFYDAGCRYLQFDDTVWAYLCSQDELKKARERGDNPDGLQQIYSRIINYAIAERPADMTIT THVCRGNFRSTWISSGGYEPVAETMLANTNYDGYFLEYDSERAGGFEPLRFLPKGNKVVVVGLVTSKVGELEKKDDIKRR LEEASKFAPLDQLALSPQCGFASTEEGNILSEEEQWAKLRLCVELAEEIWGK
Specific function: Unknown
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yxjH [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002629 [H]
Pfam domain/function: PF01717 Meth_synt_2 [H]
EC number: NA
Molecular weight: Translated: 42263; Mature: 42263
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRTKPPFRADEVGSLLRPQKIKEARAKLEKGEISAADLAKIEDMEIEKVVHRQASTGLK CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCE LATDGEFRRSWWHFDFLAKLTGCELFHPDTGIQFTGVQTRHDAVRVIGKLDFPDTHPMLD EECCCHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHH HFRFLKKHADTAHVTAKMTIPSPAVLHFRGGRKSISKEVYPDLDAFYEDLGKTYRKAVKA HHHHHHHCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FYDAGCRYLQFDDTVWAYLCSQDELKKARERGDNPDGLQQIYSRIINYAIAERPADMTIT HHHCCCEEEEECCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE THVCRGNFRSTWISSGGYEPVAETMLANTNYDGYFLEYDSERAGGFEPLRFLPKGNKVVV EHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEE VGLVTSKVGELEKKDDIKRRLEEASKFAPLDQLALSPQCGFASTEEGNILSEEEQWAKLR EEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH LCVELAEEIWGK HHHHHHHHHHCC >Mature Secondary Structure MQRTKPPFRADEVGSLLRPQKIKEARAKLEKGEISAADLAKIEDMEIEKVVHRQASTGLK CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCE LATDGEFRRSWWHFDFLAKLTGCELFHPDTGIQFTGVQTRHDAVRVIGKLDFPDTHPMLD EECCCHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHH HFRFLKKHADTAHVTAKMTIPSPAVLHFRGGRKSISKEVYPDLDAFYEDLGKTYRKAVKA HHHHHHHCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FYDAGCRYLQFDDTVWAYLCSQDELKKARERGDNPDGLQQIYSRIINYAIAERPADMTIT HHHCCCEEEEECCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE THVCRGNFRSTWISSGGYEPVAETMLANTNYDGYFLEYDSERAGGFEPLRFLPKGNKVVV EHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEE VGLVTSKVGELEKKDDIKRRLEEASKFAPLDQLALSPQCGFASTEEGNILSEEEQWAKLR EEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH LCVELAEEIWGK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10568751 [H]