Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342103
Identifier: 146342103
GI number: 146342103
Start: 5459980
End: 5460420
Strand: Reverse
Name: 146342103
Synonym: BRADO5247
Alternate gene names: NA
Gene position: 5460420-5459980 (Counterclockwise)
Preceding gene: 146342105
Following gene: 146342099
Centisome position: 73.23
GC content: 56.01
Gene sequence:
>441_bases TTGGGCCTCCGGCTCTGCAAGATATTCTGCGGCATCGAAGCGCGTCGTTGCCATTCGCTATTCCTCTCTCTCAGCCAATT CCTGAGCGCGCCGGATATCGGAACGCTGGGTGCTCTTGTCACCTCCGCAAAGCAGGATCACCAATATCTTGCCTTTCTGG TGAAAATAGACGCGATAGCCGGGGCCATGATCAATCCGCATCTCGGAGACGCCGCCACCGACAGGCTTGCTGTCTCCAAG GTTGCCAGCTTCGGCCCGAGCAATGCGGGCAGCAATACGCGCCTTTGCTCTCGCATCTCGCAAACCAAGGAGCCATTCCT TGAATTCGTTGGTCTGCCTGATTTCGAGCATGGAGAAATGTATCTTAAAAGATACAGATTTGCAAGAGAGAAGAGCGCGA CGTGGCTGCTGCCCGGCAGCAGGACTGCGCGCCTCGATTAG
Upstream 100 bases:
>100_bases TGGCGACCTCTGACATGCCGCGTGCCCGGGCAATTGTGTTGATCGCAGCGCGGATGTCATCAGCGGTGCCATCCTCGAGC GCCGCCGCCAGGAATTCGGC
Downstream 100 bases:
>100_bases AGTTGGGACGCCGGAGCCATCCGCCCCGCTTCATTCTTGCGCAGCAGCGCCCGGCGGATCCGCCGCTGGGCGGGGGCCTC GAACCAGACATAGGTGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGLRLCKIFCGIEARRCHSLFLSLSQFLSAPDIGTLGALVTSAKQDHQYLAFLVKIDAIAGAMINPHLGDAATDRLAVSK VASFGPSNAGSNTRLCSRISQTKEPFLEFVGLPDFEHGEMYLKRYRFAREKSATWLLPGSRTARLD
Sequences:
>Translated_146_residues MGLRLCKIFCGIEARRCHSLFLSLSQFLSAPDIGTLGALVTSAKQDHQYLAFLVKIDAIAGAMINPHLGDAATDRLAVSK VASFGPSNAGSNTRLCSRISQTKEPFLEFVGLPDFEHGEMYLKRYRFAREKSATWLLPGSRTARLD >Mature_145_residues GLRLCKIFCGIEARRCHSLFLSLSQFLSAPDIGTLGALVTSAKQDHQYLAFLVKIDAIAGAMINPHLGDAATDRLAVSKV ASFGPSNAGSNTRLCSRISQTKEPFLEFVGLPDFEHGEMYLKRYRFAREKSATWLLPGSRTARLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16049; Mature: 15918
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRLCKIFCGIEARRCHSLFLSLSQFLSAPDIGTLGALVTSAKQDHQYLAFLVKIDAIA CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAMINPHLGDAATDRLAVSKVASFGPSNAGSNTRLCSRISQTKEPFLEFVGLPDFEHGEM HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH YLKRYRFAREKSATWLLPGSRTARLD HHHHHHHHHHCCCEEECCCCCCCCCC >Mature Secondary Structure GLRLCKIFCGIEARRCHSLFLSLSQFLSAPDIGTLGALVTSAKQDHQYLAFLVKIDAIA CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAMINPHLGDAATDRLAVSKVASFGPSNAGSNTRLCSRISQTKEPFLEFVGLPDFEHGEM HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH YLKRYRFAREKSATWLLPGSRTARLD HHHHHHHHHHCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA