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The map label for this gene is 146342070

Identifier: 146342070

GI number: 146342070

Start: 5424235

End: 5425461

Strand: Reverse

Name: 146342070

Synonym: BRADO5210

Alternate gene names: NA

Gene position: 5425461-5424235 (Counterclockwise)

Preceding gene: 146342071

Following gene: 146342066

Centisome position: 72.76

GC content: 49.39

Gene sequence:

>1227_bases
GTGACGATCGATTGGTTTAAGCCGCGAGGCTATAGGCATTTTGATGCGCAGATCGGCGAGCAATATGCCATTAAGGTTGC
AGATGAAGGTTTTGTTGAGCGCCATGCTTGGCTGCCTTTAATCCGCTACCAAAAGCGGGTTAAGCGCTATAAGCCAAAGC
TCGGCAAGACGGTCTTTAAGCAAAGACCGATCATGTATGCTTCGCATAGAGACTCGTGCATTCTCTCTAAATATGCGTGG
GATCTATCCAAGCGCCTGGATGCGTATTATGAGCGCAAAGGCTTGGATCGGAACGTAATTGCCTACCGAAGGCTTGGAAA
GTCGAACTATCATTTCTCGGCTGAAGCGTTCCAGTTCGCAAAGAGTAGGCCGGGTTGCGTGGTATTATGTTTTGACATAA
GCGGATTCTTTGACAATCTTGATCATCGAATCCTGAAGCGACGATTGAAGTTCATTCTCGAAGTCGAGGAGCTTGGTCGC
GACTGGTTTGCAGTCTTTCGTCACGTGACGCGGTTTAGCACAGTCGATAAGTCCGCACTTGCTGCTCACCCCCGATTTTC
TTCGCAGCTTTCGGGCGACTCTAGAGAGCCAATCGCTACAATTGCCGAAGTCAAATTGGAGGGGATTCCAATCCTGGTGA
ATGATGAAAGGTTTGGAATCCCGCAGGGAACTCCTATTAGTAGTGCGCTATCGAACTTGTACATGTTGGAACTAGACGAA
AGAATGGTTGAGTGCTGCCGAAGGTGTGGGGCCCTATATCAAAGGTATTCGGACGATATTTTGATAGTTTGCAATATCGG
TGACGAAGTTCAGCTCAGGTCGGCCTTCCTAACTGAGCTAAAGAAGCATCAACTGGAAATCAACGAAGACAAGACTGAAA
GGGTTGTGTTTGGCTCGGTGGGGGCGCGAGAGTTTCAGTACCTTGGATTCAACATTTCCGCCAAGGGCGCTGCGATCAGG
CCGGGCTCGCTAGCTAGGCAGTGGCGAAAGGCAAAGCGCAGTATAGCTCGCACCAAGCGTATCGGGAGGGCGGAGATGGC
ATTGGGAAACGCTACCAAGATTTATACTAAGAAGCTTAGGAAACGATTCTATCCAGTAGGATCTCGTAACTTCTCTTCCT
ATGCGCGGCGTTCAGCTAGTGTTTTCGAGAGTAAGCAGATGTTGAGGCAGGTTCTCCGTTTTGAGCGAATGATAGATGCT
GCCTTGCGCAGCATGGACGATCCTTAG

Upstream 100 bases:

>100_bases
TCGCTGATGGATATAGGCGTGCGTTTGGGAGGCGTTCGACTTTTGTCGAGGCTCGGGGTCAGAGCTAGTCTCCCAAACTC
TGCACATCGAAGGGGCAGAT

Downstream 100 bases:

>100_bases
GCTGGTTTAGCGCGGGCATTTTCATAATAACGGCGCCTTGACAAATTCGCCAAATCAGCATTACAGTCCCGTCCATCCCG
ATGCGCGGTAGGGGACGGTT

Product: putative Reverse transcriptase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MTIDWFKPRGYRHFDAQIGEQYAIKVADEGFVERHAWLPLIRYQKRVKRYKPKLGKTVFKQRPIMYASHRDSCILSKYAW
DLSKRLDAYYERKGLDRNVIAYRRLGKSNYHFSAEAFQFAKSRPGCVVLCFDISGFFDNLDHRILKRRLKFILEVEELGR
DWFAVFRHVTRFSTVDKSALAAHPRFSSQLSGDSREPIATIAEVKLEGIPILVNDERFGIPQGTPISSALSNLYMLELDE
RMVECCRRCGALYQRYSDDILIVCNIGDEVQLRSAFLTELKKHQLEINEDKTERVVFGSVGAREFQYLGFNISAKGAAIR
PGSLARQWRKAKRSIARTKRIGRAEMALGNATKIYTKKLRKRFYPVGSRNFSSYARRSASVFESKQMLRQVLRFERMIDA
ALRSMDDP

Sequences:

>Translated_408_residues
MTIDWFKPRGYRHFDAQIGEQYAIKVADEGFVERHAWLPLIRYQKRVKRYKPKLGKTVFKQRPIMYASHRDSCILSKYAW
DLSKRLDAYYERKGLDRNVIAYRRLGKSNYHFSAEAFQFAKSRPGCVVLCFDISGFFDNLDHRILKRRLKFILEVEELGR
DWFAVFRHVTRFSTVDKSALAAHPRFSSQLSGDSREPIATIAEVKLEGIPILVNDERFGIPQGTPISSALSNLYMLELDE
RMVECCRRCGALYQRYSDDILIVCNIGDEVQLRSAFLTELKKHQLEINEDKTERVVFGSVGAREFQYLGFNISAKGAAIR
PGSLARQWRKAKRSIARTKRIGRAEMALGNATKIYTKKLRKRFYPVGSRNFSSYARRSASVFESKQMLRQVLRFERMIDA
ALRSMDDP
>Mature_407_residues
TIDWFKPRGYRHFDAQIGEQYAIKVADEGFVERHAWLPLIRYQKRVKRYKPKLGKTVFKQRPIMYASHRDSCILSKYAWD
LSKRLDAYYERKGLDRNVIAYRRLGKSNYHFSAEAFQFAKSRPGCVVLCFDISGFFDNLDHRILKRRLKFILEVEELGRD
WFAVFRHVTRFSTVDKSALAAHPRFSSQLSGDSREPIATIAEVKLEGIPILVNDERFGIPQGTPISSALSNLYMLELDER
MVECCRRCGALYQRYSDDILIVCNIGDEVQLRSAFLTELKKHQLEINEDKTERVVFGSVGAREFQYLGFNISAKGAAIRP
GSLARQWRKAKRSIARTKRIGRAEMALGNATKIYTKKLRKRFYPVGSRNFSSYARRSASVFESKQMLRQVLRFERMIDAA
LRSMDDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47391; Mature: 47260

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS50878 RT_POL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDWFKPRGYRHFDAQIGEQYAIKVADEGFVERHAWLPLIRYQKRVKRYKPKLGKTVFK
CCCCCCCCCCCEEHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QRPIMYASHRDSCILSKYAWDLSKRLDAYYERKGLDRNVIAYRRLGKSNYHFSAEAFQFA
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHH
KSRPGCVVLCFDISGFFDNLDHRILKRRLKFILEVEELGRDWFAVFRHVTRFSTVDKSAL
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHH
AAHPRFSSQLSGDSREPIATIAEVKLEGIPILVNDERFGIPQGTPISSALSNLYMLELDE
HCCCCCHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
RMVECCRRCGALYQRYSDDILIVCNIGDEVQLRSAFLTELKKHQLEINEDKTERVVFGSV
HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
GAREFQYLGFNISAKGAAIRPGSLARQWRKAKRSIARTKRIGRAEMALGNATKIYTKKLR
CCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHH
KRFYPVGSRNFSSYARRSASVFESKQMLRQVLRFERMIDAALRSMDDP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIDWFKPRGYRHFDAQIGEQYAIKVADEGFVERHAWLPLIRYQKRVKRYKPKLGKTVFK
CCCCCCCCCCEEHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QRPIMYASHRDSCILSKYAWDLSKRLDAYYERKGLDRNVIAYRRLGKSNYHFSAEAFQFA
CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHH
KSRPGCVVLCFDISGFFDNLDHRILKRRLKFILEVEELGRDWFAVFRHVTRFSTVDKSAL
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHH
AAHPRFSSQLSGDSREPIATIAEVKLEGIPILVNDERFGIPQGTPISSALSNLYMLELDE
HCCCCCHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
RMVECCRRCGALYQRYSDDILIVCNIGDEVQLRSAFLTELKKHQLEINEDKTERVVFGSV
HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
GAREFQYLGFNISAKGAAIRPGSLARQWRKAKRSIARTKRIGRAEMALGNATKIYTKKLR
CCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHH
KRFYPVGSRNFSSYARRSASVFESKQMLRQVLRFERMIDAALRSMDDP
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA