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The map label for this gene is lpcC [H]

Identifier: 146342066

GI number: 146342066

Start: 5418584

End: 5419630

Strand: Reverse

Name: lpcC [H]

Synonym: BRADO5206

Alternate gene names: 146342066

Gene position: 5419630-5418584 (Counterclockwise)

Preceding gene: 146342070

Following gene: 146342062

Centisome position: 72.68

GC content: 68.39

Gene sequence:

>1047_bases
GTGCAAGCCGAGCCGTTTTCCGCCGGAGACCTCGACGTCATCGTGCCGAACCTGCACCGCCGCTATTCCGGCGTGACGGC
GACCAACCGCATGGTGGCGCCGAAGCTCGCGAGACTGGTGCGCGCGGCCTGGCTCGGCAGCTACGCGCCGGAAGGGATCG
CGCGGTTGCGCGCGCGTGATCTGCTCAAGGTGCGGGGCCGTCGCCGGCCGTTGATCTGGCACGCGCGCCGCAACGACGAG
ATGATCGTCGGCGTGATCCTGCGCGCGCTGGGCTGGCCGTTCAAGCTGCTGTTCACCTCGGCCGCGCAGCGCCATCATAG
CTGGATCACACGCGGGCTGATCCGGCGCATGGACGCGATCATCGCCACCAGCGACATCTCAGCGTCCTATTTGAAGCGCG
CGGCGACGGTCATCACGCATGGCGTCGATACCGAGGTGTATAAGCCACCCGCCGATCGCGCCGCAGCCTTCGCCGAGAGC
GGCCTGCCCGGCCGATATGCCATCGGGTGTTTCGGCCGCGTCCGTGCGCAGAAGGGCAGCGACCTCTTCGTCGCGGCGAT
GTGCCGGCTGCTGCCGAAGTATCCGGACTTTTCCGCGGTACTGGTCGGCGCCGTCACGCCCGAGCAGATGCCGTTTGCAG
CCGAACTGAGGAAGCAGATCGCCGCTGCGGGATTGGAGCAGCGCATCGTCATCACCGGCGAGCTCGACATCGCCGACGTG
CAGCGCTGGTACCAGCGCCTGACGATCTACGCCTTTACCTCGCGCAATGAAGGCTTTGGCCTGACCCTGATCGAGGCAAT
GGCCGCCGGCGCAGCGCTGGTCGCTGCGCGCGCAGGCGCTGCGGAGATCGTGGTGGAGGAGGGCGTGACCGGGAGGCTGG
TGCCGCCGGGCGATGTCGATGCGCTGGTCGCCGCGCTGGAACCGCTGATGCAGGATCCCGAGGCGGCGCGGGTGATGGGG
GAGAAGGCGCGGACGCGCGTGGTGGAAAAGTTCAGCCTCGAGGCCGAGGCCGAGAAGATCGCCGCCGTCTACCGCGGACT
GGTCTGA

Upstream 100 bases:

>100_bases
ACGCTAACGCCCGCGAAATGAAGGACCGGTTGAACGCGGATGCGAACTGGCGATGGTGCTCAATGTTGCGTATAGGGAAC
CGTTAAAATTGGAGTGGATG

Downstream 100 bases:

>100_bases
GCGATGACCTCGGTGACAAATGCATCGAGGTCGCCGCCGGCGAACAGGAAGCCGGGCAGGCCGGCCGCTTCGGCGGCTGC
GATGTCGGAGGCCCGGTCGC

Product: lipopolysaccharide core biosynthesis mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MQAEPFSAGDLDVIVPNLHRRYSGVTATNRMVAPKLARLVRAAWLGSYAPEGIARLRARDLLKVRGRRRPLIWHARRNDE
MIVGVILRALGWPFKLLFTSAAQRHHSWITRGLIRRMDAIIATSDISASYLKRAATVITHGVDTEVYKPPADRAAAFAES
GLPGRYAIGCFGRVRAQKGSDLFVAAMCRLLPKYPDFSAVLVGAVTPEQMPFAAELRKQIAAAGLEQRIVITGELDIADV
QRWYQRLTIYAFTSRNEGFGLTLIEAMAAGAALVAARAGAAEIVVEEGVTGRLVPPGDVDALVAALEPLMQDPEAARVMG
EKARTRVVEKFSLEAEAEKIAAVYRGLV

Sequences:

>Translated_348_residues
MQAEPFSAGDLDVIVPNLHRRYSGVTATNRMVAPKLARLVRAAWLGSYAPEGIARLRARDLLKVRGRRRPLIWHARRNDE
MIVGVILRALGWPFKLLFTSAAQRHHSWITRGLIRRMDAIIATSDISASYLKRAATVITHGVDTEVYKPPADRAAAFAES
GLPGRYAIGCFGRVRAQKGSDLFVAAMCRLLPKYPDFSAVLVGAVTPEQMPFAAELRKQIAAAGLEQRIVITGELDIADV
QRWYQRLTIYAFTSRNEGFGLTLIEAMAAGAALVAARAGAAEIVVEEGVTGRLVPPGDVDALVAALEPLMQDPEAARVMG
EKARTRVVEKFSLEAEAEKIAAVYRGLV
>Mature_348_residues
MQAEPFSAGDLDVIVPNLHRRYSGVTATNRMVAPKLARLVRAAWLGSYAPEGIARLRARDLLKVRGRRRPLIWHARRNDE
MIVGVILRALGWPFKLLFTSAAQRHHSWITRGLIRRMDAIIATSDISASYLKRAATVITHGVDTEVYKPPADRAAAFAES
GLPGRYAIGCFGRVRAQKGSDLFVAAMCRLLPKYPDFSAVLVGAVTPEQMPFAAELRKQIAAAGLEQRIVITGELDIADV
QRWYQRLTIYAFTSRNEGFGLTLIEAMAAGAALVAARAGAAEIVVEEGVTGRLVPPGDVDALVAALEPLMQDPEAARVMG
EKARTRVVEKFSLEAEAEKIAAVYRGLV

Specific function: Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 37996; Mature: 37996

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAEPFSAGDLDVIVPNLHRRYSGVTATNRMVAPKLARLVRAAWLGSYAPEGIARLRARD
CCCCCCCCCCCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLKVRGRRRPLIWHARRNDEMIVGVILRALGWPFKLLFTSAAQRHHSWITRGLIRRMDAI
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATSDISASYLKRAATVITHGVDTEVYKPPADRAAAFAESGLPGRYAIGCFGRVRAQKGS
HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHCCCCC
DLFVAAMCRLLPKYPDFSAVLVGAVTPEQMPFAAELRKQIAAAGLEQRIVITGELDIADV
CHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHH
QRWYQRLTIYAFTSRNEGFGLTLIEAMAAGAALVAARAGAAEIVVEEGVTGRLVPPGDVD
HHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHH
ALVAALEPLMQDPEAARVMGEKARTRVVEKFSLEAEAEKIAAVYRGLV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQAEPFSAGDLDVIVPNLHRRYSGVTATNRMVAPKLARLVRAAWLGSYAPEGIARLRARD
CCCCCCCCCCCEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LLKVRGRRRPLIWHARRNDEMIVGVILRALGWPFKLLFTSAAQRHHSWITRGLIRRMDAI
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IATSDISASYLKRAATVITHGVDTEVYKPPADRAAAFAESGLPGRYAIGCFGRVRAQKGS
HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHCCCCC
DLFVAAMCRLLPKYPDFSAVLVGAVTPEQMPFAAELRKQIAAAGLEQRIVITGELDIADV
CHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHH
QRWYQRLTIYAFTSRNEGFGLTLIEAMAAGAALVAARAGAAEIVVEEGVTGRLVPPGDVD
HHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHH
ALVAALEPLMQDPEAARVMGEKARTRVVEKFSLEAEAEKIAAVYRGLV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9756877 [H]