Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is gmhB1 [H]
Identifier: 146342065
GI number: 146342065
Start: 5418075
End: 5418602
Strand: Direct
Name: gmhB1 [H]
Synonym: BRADO5205
Alternate gene names: 146342065
Gene position: 5418075-5418602 (Clockwise)
Preceding gene: 146342064
Following gene: 146342067
Centisome position: 72.66
GC content: 67.05
Gene sequence:
>528_bases ATGACGACTCCTCAGCTCAAGCCCGCGGCGTTCCTCGATCGCGACGGCGTCATCAACCACGACGACAACTACATCGGCTC GCCCGAGCGCATCCGCTGGATGCCGAATGTGGCGGCTGCGATCCGGCGGCTGAACGAGGCCGGCTATCACGTCTTCCTGT TCACCAACCAGTCGGGCGTCGCGCGCGGGCTGTTCAGCGAGGACGACGTGCTCAGCCTGCATGATTGGATGCGGGCGGAG CTGGCGGCGCAGGGGGCCGTGATCGACGACATCCGCTACTGCCCGTACCATACCGAAGGCTCCGTCGAGCGATACCTGCG CGAGCATCCCTGGCGCAAGCCACAGCCGGGAATGATCCTCGACCTGATGCAGCACTGGGCTGTCCGGCGCGAGGGCAGCT TCGTGATCGGCGACCGGGCCTCCGACATCGCAGCCGCCGAAGCGGCCGGCCTGCCCGGCTTCCTGTTCGCCGGCGGCGAC CTCGATGCATTTGTCACCGAGGTCATCGCTCAGACCAGTCCGCGGTAG
Upstream 100 bases:
>100_bases GCCGAGCGACGATACGCCGCTGATCCAGCAGATCCACCTCGCCACCGCGCACGGCATCTGCGAGACCATCGAGGCGGCGC TGATGCAGGACGCGCGCTAG
Downstream 100 bases:
>100_bases ACGGCGGCGATCTTCTCGGCCTCGGCCTCGAGGCTGAACTTTTCCACCACGCGCGTCCGCGCCTTCTCCCCCATCACCCG CGCCGCCTCGGGATCCTGCA
Product: putative histidinol-phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase 1 [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTTPQLKPAAFLDRDGVINHDDNYIGSPERIRWMPNVAAAIRRLNEAGYHVFLFTNQSGVARGLFSEDDVLSLHDWMRAE LAAQGAVIDDIRYCPYHTEGSVERYLREHPWRKPQPGMILDLMQHWAVRREGSFVIGDRASDIAAAEAAGLPGFLFAGGD LDAFVTEVIAQTSPR
Sequences:
>Translated_175_residues MTTPQLKPAAFLDRDGVINHDDNYIGSPERIRWMPNVAAAIRRLNEAGYHVFLFTNQSGVARGLFSEDDVLSLHDWMRAE LAAQGAVIDDIRYCPYHTEGSVERYLREHPWRKPQPGMILDLMQHWAVRREGSFVIGDRASDIAAAEAAGLPGFLFAGGD LDAFVTEVIAQTSPR >Mature_174_residues TTPQLKPAAFLDRDGVINHDDNYIGSPERIRWMPNVAAAIRRLNEAGYHVFLFTNQSGVARGLFSEDDVLSLHDWMRAEL AAQGAVIDDIRYCPYHTEGSVERYLREHPWRKPQPGMILDLMQHWAVRREGSFVIGDRASDIAAAEAAGLPGFLFAGGDL DAFVTEVIAQTSPR
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=144, Percent_Identity=39.5833333333333, Blast_Score=116, Evalue=9e-28, Organism=Escherichia coli, GI87082027, Length=149, Percent_Identity=28.8590604026846, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: 3.1.1.-
Molecular weight: Translated: 19551; Mature: 19420
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPQLKPAAFLDRDGVINHDDNYIGSPERIRWMPNVAAAIRRLNEAGYHVFLFTNQSGV CCCCCCCCHHHCCCCCCCCCCCCCCCCHHHEEECCHHHHHHHHHHHCCCEEEEEECCCCC ARGLFSEDDVLSLHDWMRAELAAQGAVIDDIRYCPYHTEGSVERYLREHPWRKPQPGMIL CCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH DLMQHWAVRREGSFVIGDRASDIAAAEAAGLPGFLFAGGDLDAFVTEVIAQTSPR HHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure TTPQLKPAAFLDRDGVINHDDNYIGSPERIRWMPNVAAAIRRLNEAGYHVFLFTNQSGV CCCCCCCHHHCCCCCCCCCCCCCCCCHHHEEECCHHHHHHHHHHHCCCEEEEEECCCCC ARGLFSEDDVLSLHDWMRAELAAQGAVIDDIRYCPYHTEGSVERYLREHPWRKPQPGMIL CCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHH DLMQHWAVRREGSFVIGDRASDIAAAEAAGLPGFLFAGGDLDAFVTEVIAQTSPR HHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]