Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is capM [H]
Identifier: 146342057
GI number: 146342057
Start: 5408367
End: 5409524
Strand: Direct
Name: capM [H]
Synonym: BRADO5197
Alternate gene names: 146342057
Gene position: 5408367-5409524 (Clockwise)
Preceding gene: 146342053
Following gene: 146342058
Centisome position: 72.53
GC content: 70.98
Gene sequence:
>1158_bases ATGCCCCCGCCCCACTCCGCTTCGCCGCGCCGCCTGCTCTACGTGGCCAACGAGGATTTCGCGTTCCTGATGCACCGGCT GCCGATGGCGCGCGCCGCGCGCGATGCCGGCTACGAGGTGCATGTCGCGACCAACGTCAATGCGGGCGCCGCCGCGATCG CCGCCGAGCGCTTCGTCCTGCATCCGATCCCGTTCCGGCGCGGCGGACTTTCGCCGTCGTCAGCTCTGCCCACGGTCCGA GCAATCCGCGCCGTGGAAGCGGCGATCCGACCCGACATCGTGCATCATTCGGGGCTGCAGGCGAGCGTGCTCGGCTCGCT GGCCGCGCTCGGGCGCCCTGCCCCGGTCGTCAACGCCATGACCGGCATGGGCTACATCTTCACGTCGTCGAGCTGGCGCT CGCGCCTGCTGAAGCGGGGCCTGCTCTCGCTGCTGCCGTGGCTGATGAACCGCCGCCCGAGCTGCGTGCTGGTGCAGAAC CCCGACGATCGTGATGCCCTTCAGGCGATGGGCGTGCGCGCCGACAAAATCACGCTGATCCCCGGCTCCGGCGTCGACAC CGACCGCTTCCGGCCGCTGCCGGAGCCCGACGGGCCGATCACCTTCGGCTTCGCCGGACGTCTGCTGACCGACAAGGGCA TTCGCGCGCTGATCGCGGCGCACCGGATGCTGCGGCAGCAAGGCCGCAACGATCAGCTGCTGATCGCCGGCTCGCCCGAT CCGGCCAACCCGGCCTCGGTTTCGGCCGCGGAAATCGAGGCTTGGCGCGCAGAGCCCGGCATCACCCTGCTCGGCCAGAT CAAAGACATCACCGAGCTCTGGCGGCGCTGCCACGTCGCCGTGCTTCCCTCGCATCGCGAGGGACTGCCGGTGAGCCTGC TGGAGGCTGCCGCCTGCGGCCGGCCGCTGGTCTCGACGGACGCTCCCGGCTGCCGCGAGATCGCGATCCACGGCCAGACC GGGCTCGCGGTCCTCGTCGAGGATGCCGCCGCGCTCGCGCAAGCGATGGCGCAGCTCGCGACGTCGCCCGAGCTGCGCGC GCGCTATGGTCAGGCCGCGCGGCAGCTCGTCGAGGACAAGCTCTCGGCCAGGATCATCGGCCGCTCCGTCGTGGCGCTTT ATGATCGTCTCACCGCGGCCTCAGGCGACCACCAATGA
Upstream 100 bases:
>100_bases GAACGAAAAGTAAACATCATCTGCCCTAATAACGTACGGCTCGCGTGCAGCCCGGTCTTGGCCTATACGGCGCCAAGACC GCCCGAGACCCGTGAGTTTG
Downstream 100 bases:
>100_bases TCGCCAGCCCCGCTGCCAATGCCGCTCTCATCGCCCTGCTGGCCGCGGTGATGTGCGCCGTCTCGATCGTGCTGCTGCGC CCGCTGCTGCAGCGCTATGC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MPPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVLHPIPFRRGGLSPSSALPTVR AIRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAMTGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQN PDDRDALQAMGVRADKITLIPGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPD PANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACGRPLVSTDAPGCREIAIHGQT GLAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDKLSARIIGRSVVALYDRLTAASGDHQ
Sequences:
>Translated_385_residues MPPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVLHPIPFRRGGLSPSSALPTVR AIRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAMTGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQN PDDRDALQAMGVRADKITLIPGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPD PANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACGRPLVSTDAPGCREIAIHGQT GLAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDKLSARIIGRSVVALYDRLTAASGDHQ >Mature_384_residues PPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVLHPIPFRRGGLSPSSALPTVRA IRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAMTGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQNP DDRDALQAMGVRADKITLIPGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPDP ANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACGRPLVSTDAPGCREIAIHGQTG LAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDKLSARIIGRSVVALYDRLTAASGDHQ
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 41227; Mature: 41096
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVL CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHEE HPIPFRRGGLSPSSALPTVRAIRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAM CCCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHH TGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQNPDDRDALQAMGVRADKITLI HCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCEEEEE PGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPD CCCCCCHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC PANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACG CCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCC RPLVSTDAPGCREIAIHGQTGLAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDK CCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LSARIIGRSVVALYDRLTAASGDHQ HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVL CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHEE HPIPFRRGGLSPSSALPTVRAIRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAM CCCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHH TGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQNPDDRDALQAMGVRADKITLI HCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCEEEEE PGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPD CCCCCCHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC PANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACG CCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCC RPLVSTDAPGCREIAIHGQTGLAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDK CCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LSARIIGRSVVALYDRLTAASGDHQ HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]