Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342055
Identifier: 146342055
GI number: 146342055
Start: 5406054
End: 5407187
Strand: Reverse
Name: 146342055
Synonym: BRADO5195
Alternate gene names: NA
Gene position: 5407187-5406054 (Counterclockwise)
Preceding gene: 146342056
Following gene: 146342054
Centisome position: 72.52
GC content: 58.73
Gene sequence:
>1134_bases GTGAACTTGAACACTGACGAACTTGTCTGGACGGAGTTGGAGCGTTATGCGCTGCCTCCATCGCTGAGTTGGATTGCGGA TCGGGGGTTCAATTGGCCCGAAGCGATCCACAAGTCGCAGGGACGGGGCGCGACAGCGATCGATGTCGAAACGCTCAGAG CTCTTGCAGCTTTTACCAACGAACGTCCGGCATCCGCGAAATTGCCGTTCGCTTACACGAGGGTTCCTCCTTTCGCCCGC CAGTTGATCGCCAAGGCGATCGGTCGCATGCAGCGGGTGAGACAGAAAAAATGGGCGAGATTTCCCGCATGGCCGGTCGA TCTCAGCGTCGACGCACTCGCGGACATGTCCGGCGTCCCCTCGATCAAATTCCCGGTTACGCCGGTCATGGTGTCGCACG ACATCGACAGCCCGGAGGGGCTTGCCAACCTCGTCAAGCAGTTCCTGCCGATCGAGGAGCGGGCCGGGTGCCGGTCTGCT AACTATATCGTTCCATGCGCGTGGTCGATCGACCACGCTATCGTCCGCGAGGCTGCTCAGCGCGGACACGAAATTGGGGT GCACGGCTACGATCATTCCAATTGGACGCCTTTTGCAGATCCAGCCGAGCGGGCCCGCCGCCTCGAAGAGGGTTATCGCC TGGCGGAACGCTACGATGGCATTGGCTATCGGGCTCCATCGCTGGTCCGGACACAAGAACTAATCGACGGACTTAAGCGA CACTATAGATATGACTCCAGCATACCCACGTCAGGAGGTCCGTTTCCGGTACCTAACAACGGATGCGCGAGCGCACGGCC TTGGCTCTTCGGAGACATGTGGGAACTCCCTTTGACGATGCCGCGCGACGGCAGCCTGCGATTTCTCGGCTATTCTCCGG ACGAGATTCTGTCACTGTGGACATCCTCAGCTGAGTACATTTCACGCTCTGGTGGAATTATTTTTCTATTGACCCACTGC GAAGCGGGGTTTTCTGGCAATCCTCCAATGCTGGCGATCTACGAAGCTTTTCTGCAATGGTGCGCCAGTAATCCTTCGAT GCGCTTCTGCTGTCCTCGCGATCTAGTTGACGAACTGGCTGCCGCTGAGAACGGTCCTGGCGGCGCCGAGCCGACGGCTC GGGCAAACCCATAG
Upstream 100 bases:
>100_bases CTGGGCGTCATTTCCGAGTACCTCTATCGCATCCTGTTAGAAACAAAGAATCGGCCGCTATATTTCGTAGCCCAATCAGT CGGCTCCCGAAGCGAGGCTC
Downstream 100 bases:
>100_bases GGGATCGAGAGTGGATGAACGTCAGACAGGATCTCTCAAGCGTCTCAAGCGTCCGGTCGACTACGTTGGTCGATATCAGA CCTCAGACTACGTGGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MNLNTDELVWTELERYALPPSLSWIADRGFNWPEAIHKSQGRGATAIDVETLRALAAFTNERPASAKLPFAYTRVPPFAR QLIAKAIGRMQRVRQKKWARFPAWPVDLSVDALADMSGVPSIKFPVTPVMVSHDIDSPEGLANLVKQFLPIEERAGCRSA NYIVPCAWSIDHAIVREAAQRGHEIGVHGYDHSNWTPFADPAERARRLEEGYRLAERYDGIGYRAPSLVRTQELIDGLKR HYRYDSSIPTSGGPFPVPNNGCASARPWLFGDMWELPLTMPRDGSLRFLGYSPDEILSLWTSSAEYISRSGGIIFLLTHC EAGFSGNPPMLAIYEAFLQWCASNPSMRFCCPRDLVDELAAAENGPGGAEPTARANP
Sequences:
>Translated_377_residues MNLNTDELVWTELERYALPPSLSWIADRGFNWPEAIHKSQGRGATAIDVETLRALAAFTNERPASAKLPFAYTRVPPFAR QLIAKAIGRMQRVRQKKWARFPAWPVDLSVDALADMSGVPSIKFPVTPVMVSHDIDSPEGLANLVKQFLPIEERAGCRSA NYIVPCAWSIDHAIVREAAQRGHEIGVHGYDHSNWTPFADPAERARRLEEGYRLAERYDGIGYRAPSLVRTQELIDGLKR HYRYDSSIPTSGGPFPVPNNGCASARPWLFGDMWELPLTMPRDGSLRFLGYSPDEILSLWTSSAEYISRSGGIIFLLTHC EAGFSGNPPMLAIYEAFLQWCASNPSMRFCCPRDLVDELAAAENGPGGAEPTARANP >Mature_377_residues MNLNTDELVWTELERYALPPSLSWIADRGFNWPEAIHKSQGRGATAIDVETLRALAAFTNERPASAKLPFAYTRVPPFAR QLIAKAIGRMQRVRQKKWARFPAWPVDLSVDALADMSGVPSIKFPVTPVMVSHDIDSPEGLANLVKQFLPIEERAGCRSA NYIVPCAWSIDHAIVREAAQRGHEIGVHGYDHSNWTPFADPAERARRLEEGYRLAERYDGIGYRAPSLVRTQELIDGLKR HYRYDSSIPTSGGPFPVPNNGCASARPWLFGDMWELPLTMPRDGSLRFLGYSPDEILSLWTSSAEYISRSGGIIFLLTHC EAGFSGNPPMLAIYEAFLQWCASNPSMRFCCPRDLVDELAAAENGPGGAEPTARANP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41900; Mature: 41900
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNTDELVWTELERYALPPSLSWIADRGFNWPEAIHKSQGRGATAIDVETLRALAAFTN CCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHC ERPASAKLPFAYTRVPPFARQLIAKAIGRMQRVRQKKWARFPAWPVDLSVDALADMSGVP CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC SIKFPVTPVMVSHDIDSPEGLANLVKQFLPIEERAGCRSANYIVPCAWSIDHAIVREAAQ CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHH RGHEIGVHGYDHSNWTPFADPAERARRLEEGYRLAERYDGIGYRAPSLVRTQELIDGLKR CCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH HYRYDSSIPTSGGPFPVPNNGCASARPWLFGDMWELPLTMPRDGSLRFLGYSPDEILSLW HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECCCHHHHHHHH TSSAEYISRSGGIIFLLTHCEAGFSGNPPMLAIYEAFLQWCASNPSMRFCCPRDLVDELA HHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHH AAENGPGGAEPTARANP HCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLNTDELVWTELERYALPPSLSWIADRGFNWPEAIHKSQGRGATAIDVETLRALAAFTN CCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHC ERPASAKLPFAYTRVPPFARQLIAKAIGRMQRVRQKKWARFPAWPVDLSVDALADMSGVP CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC SIKFPVTPVMVSHDIDSPEGLANLVKQFLPIEERAGCRSANYIVPCAWSIDHAIVREAAQ CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCHHHHHHHHHHHH RGHEIGVHGYDHSNWTPFADPAERARRLEEGYRLAERYDGIGYRAPSLVRTQELIDGLKR CCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH HYRYDSSIPTSGGPFPVPNNGCASARPWLFGDMWELPLTMPRDGSLRFLGYSPDEILSLW HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECCCHHHHHHHH TSSAEYISRSGGIIFLLTHCEAGFSGNPPMLAIYEAFLQWCASNPSMRFCCPRDLVDELA HHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHH AAENGPGGAEPTARANP HCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA