Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342045
Identifier: 146342045
GI number: 146342045
Start: 5394129
End: 5396510
Strand: Direct
Name: 146342045
Synonym: BRADO5185
Alternate gene names: NA
Gene position: 5394129-5396510 (Clockwise)
Preceding gene: 146342044
Following gene: 146342046
Centisome position: 72.34
GC content: 56.34
Gene sequence:
>2382_bases GTGCAACGTCCACTGATCCTCAGCGACAAGCAACATCGATTGAACCGCATGGCATCCAGCTTCCCAAAATTCGCTTCTTC CGCGCTGGGTTCGATGCTTTCTGAGCTTGCAATTGCGTCAGCAATCACCGCGGTCGGCTTGTGCCTGCTCAGCGGCTACG CTCTGTCGTCTGACCAAGTCCTACTTGGCGACGGCTTGTACATCTACGAAGTGTTCTACAGCGTTTTCAGCCAGCTCAAT CAGACCGGCGAAATCCCCCGATGGTTGCCCTATTCCGCTTTCGGAATATCGGCGGACCTGCGACATCTTGTTTTGCCCTT CCTGTCTGTCCCGGTGATGGAGGCGGCCAATCTTCTGGGGTCAACTAACACCTGGAACACCTTTCTCGTCGTCCTGGCCA TCGACCTCTGGCTGACCTCCGTCGGAGCCTATCTCCTCCTGCGCCAGTTCGCGTCCAGATCGGTCGCGGCTGTTGTTGCG TCGGCTCTGGTGTGGACGATTGTCATCGACAACAACATCTATTTCTCGCTGTATACCTTCATTACGACCCCGTTTACCCT CCTGTTCATCGTATTGAGCGTGAAAAGGGAGAATTTGACCTATCTCGCCATCGCCGTTGTCTTTGCCGGCCTCGGCGCCT TTCTTCCCACTCTGTACTTTGCCCCCTATCATGCGCTCGTCTACAGCTCGGTGACGCTGACACTTGCGGCCATCTATCGC CCTCGCTTTAGCTGGAAACTCAGGCTTGATTTCTGGATCTGGACGGCAATTGCCGTGACGATCCTGGTCGCGGCTGGTTA TCTTGCGTTTTCCTCATTGCAGAACATCGAATTTTTTGCGCCCGACCGCGACGAGAATCTAAGGAGCACGCTGCACGATT ATCTCTATTACGCCGGCACTTTTGGGATGATCAAATCCCTCGAGCCTTTGATCGGCGTGCCGTTGTCCGGCCCCAATCCG CTGTTCTTTCTGACGACGATAGCCGTCGTCTTCCCACTCTACGCGATGTTCAACGGATGGAGTCGGGACGTCGTCGCCTT CCTTTTCCTGTTCTGGCTGACTCTGTTTTTCTGCTGGGGACCGAATACGCCTGTTGCGACGATCGCCTACTATTTTCCGG GGATGAGCTTTTTCAGACACGTTGGCTACACTTTTGCTTTTCCAAAATTGTTCGCGACCATTCTCACTGCAATCGGCTTG CAAAAATTCGTTGATCAGGTCAGCAGCACCGCAGATGCGAGAAATTTGGCAGCGTTGCACATTCGACCGATCATCAAGGT GGTGACCGTCGCTTCGTTGGGCGTCGGCATCTGGTACGTCACGGTCTATAAACGCTATGCACCGCGATCGTACTTTGAGC CCGCCATGGGCCTATGGCTCTGGCTGCTGCTCGCCGCTTCGTGGCTTGGAGCTCCGATGATATGGCTCATCTGCAAGCGA GTTCCTGCACGGCATTTCCTCTCGGGAATTGGAGCGGTCGTTCTCATTCAGGCGACAATCTATCAAGTCGTACAGACCTA CACCGTCTTTCATGTGCCGCTGGGATTCACGAAGTCACTGCTGGAGACCACACCGCAGCCGTTCGAGGAGGCACGAACGA CGGACATCCTCGCGCAACGGAACGGACGAATTTACGACCACATCGCGCAGATCATCACGTCCTATGCGGAAGTGTTCAGC TTTCTCCAGATTGACGCCTGCTTCACCAAGCGCTCCCGAACCGACTTTTCCATGAAGGGAGTCGCTGAGCTGGTCCGCCG GCAATTCGGCAAGGGCAAGAACCTGAACGATCTCGAAGACGCCTATAAAACATCGCCGGAGAATGCCTTTTTCCCGCTCT CCGGATGCGACGTCGCCAAGCTGCAGTGGGTACCCGCCTCCGATTCTTCCGCTGAAAAGCTCGTCGCCGGACAAGACTGG GCCGAGGATTGCGCGCGGTCGAGGCTGTGCCTCGAAGACTCACATGGGACCCGCCTGGCCGTGCCCTGGCCGGAACATGA ACCTCCAAATCGGAAGAGCTTGAAGCAGCAGGGAATAAGGGTGGAGCGGTTCTACTTCGACAACGTCAGGTTTTCGCTGA CGGTCGACAGTCCCGGCTGGCTGCTCTATGCTGACGCCTTCGATCCTCGGTGGAGCGTCGACATCGACGGAAAACCTGCG GAGAATTGGCGGGCGAACTTCGCCTACAAGGCGGTTCGTTTGGGCCCTGGTGAACATAGCGTCGAATGGCACTTTGGACG TGGCGATGTCCGCCCCGTGGTCTTCAAGGCCCATCAGGCGCTTTGTCTGATTCTGATCGTCGTTCTGGTCTTGAAGTCGG CGGCACTGAGCGGCACGGCTCATGGTGCTCGCCGGATACCTGGAGCGGGTCAGGCTGCTTGA
Upstream 100 bases:
>100_bases GCTGCATGGGGCGCATCCAATCTCCCGACTGAACTCACACCAGGACGACACCTGGGGACACGGTCCAGTGCTTTGTGTTT GACATTCGCTGTCCAAGCTG
Downstream 100 bases:
>100_bases TCCCACGTTGCAACCCACTTCCGCTGAGGTGAGATGTCGTGAGGGCGATCCAGCTGGTTCTGGCCGAGATGCTTGACAGA CCGCCCCCTCTCCTCTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MQRPLILSDKQHRLNRMASSFPKFASSALGSMLSELAIASAITAVGLCLLSGYALSSDQVLLGDGLYIYEVFYSVFSQLN QTGEIPRWLPYSAFGISADLRHLVLPFLSVPVMEAANLLGSTNTWNTFLVVLAIDLWLTSVGAYLLLRQFASRSVAAVVA SALVWTIVIDNNIYFSLYTFITTPFTLLFIVLSVKRENLTYLAIAVVFAGLGAFLPTLYFAPYHALVYSSVTLTLAAIYR PRFSWKLRLDFWIWTAIAVTILVAAGYLAFSSLQNIEFFAPDRDENLRSTLHDYLYYAGTFGMIKSLEPLIGVPLSGPNP LFFLTTIAVVFPLYAMFNGWSRDVVAFLFLFWLTLFFCWGPNTPVATIAYYFPGMSFFRHVGYTFAFPKLFATILTAIGL QKFVDQVSSTADARNLAALHIRPIIKVVTVASLGVGIWYVTVYKRYAPRSYFEPAMGLWLWLLLAASWLGAPMIWLICKR VPARHFLSGIGAVVLIQATIYQVVQTYTVFHVPLGFTKSLLETTPQPFEEARTTDILAQRNGRIYDHIAQIITSYAEVFS FLQIDACFTKRSRTDFSMKGVAELVRRQFGKGKNLNDLEDAYKTSPENAFFPLSGCDVAKLQWVPASDSSAEKLVAGQDW AEDCARSRLCLEDSHGTRLAVPWPEHEPPNRKSLKQQGIRVERFYFDNVRFSLTVDSPGWLLYADAFDPRWSVDIDGKPA ENWRANFAYKAVRLGPGEHSVEWHFGRGDVRPVVFKAHQALCLILIVVLVLKSAALSGTAHGARRIPGAGQAA
Sequences:
>Translated_793_residues MQRPLILSDKQHRLNRMASSFPKFASSALGSMLSELAIASAITAVGLCLLSGYALSSDQVLLGDGLYIYEVFYSVFSQLN QTGEIPRWLPYSAFGISADLRHLVLPFLSVPVMEAANLLGSTNTWNTFLVVLAIDLWLTSVGAYLLLRQFASRSVAAVVA SALVWTIVIDNNIYFSLYTFITTPFTLLFIVLSVKRENLTYLAIAVVFAGLGAFLPTLYFAPYHALVYSSVTLTLAAIYR PRFSWKLRLDFWIWTAIAVTILVAAGYLAFSSLQNIEFFAPDRDENLRSTLHDYLYYAGTFGMIKSLEPLIGVPLSGPNP LFFLTTIAVVFPLYAMFNGWSRDVVAFLFLFWLTLFFCWGPNTPVATIAYYFPGMSFFRHVGYTFAFPKLFATILTAIGL QKFVDQVSSTADARNLAALHIRPIIKVVTVASLGVGIWYVTVYKRYAPRSYFEPAMGLWLWLLLAASWLGAPMIWLICKR VPARHFLSGIGAVVLIQATIYQVVQTYTVFHVPLGFTKSLLETTPQPFEEARTTDILAQRNGRIYDHIAQIITSYAEVFS FLQIDACFTKRSRTDFSMKGVAELVRRQFGKGKNLNDLEDAYKTSPENAFFPLSGCDVAKLQWVPASDSSAEKLVAGQDW AEDCARSRLCLEDSHGTRLAVPWPEHEPPNRKSLKQQGIRVERFYFDNVRFSLTVDSPGWLLYADAFDPRWSVDIDGKPA ENWRANFAYKAVRLGPGEHSVEWHFGRGDVRPVVFKAHQALCLILIVVLVLKSAALSGTAHGARRIPGAGQAA >Mature_793_residues MQRPLILSDKQHRLNRMASSFPKFASSALGSMLSELAIASAITAVGLCLLSGYALSSDQVLLGDGLYIYEVFYSVFSQLN QTGEIPRWLPYSAFGISADLRHLVLPFLSVPVMEAANLLGSTNTWNTFLVVLAIDLWLTSVGAYLLLRQFASRSVAAVVA SALVWTIVIDNNIYFSLYTFITTPFTLLFIVLSVKRENLTYLAIAVVFAGLGAFLPTLYFAPYHALVYSSVTLTLAAIYR PRFSWKLRLDFWIWTAIAVTILVAAGYLAFSSLQNIEFFAPDRDENLRSTLHDYLYYAGTFGMIKSLEPLIGVPLSGPNP LFFLTTIAVVFPLYAMFNGWSRDVVAFLFLFWLTLFFCWGPNTPVATIAYYFPGMSFFRHVGYTFAFPKLFATILTAIGL QKFVDQVSSTADARNLAALHIRPIIKVVTVASLGVGIWYVTVYKRYAPRSYFEPAMGLWLWLLLAASWLGAPMIWLICKR VPARHFLSGIGAVVLIQATIYQVVQTYTVFHVPLGFTKSLLETTPQPFEEARTTDILAQRNGRIYDHIAQIITSYAEVFS FLQIDACFTKRSRTDFSMKGVAELVRRQFGKGKNLNDLEDAYKTSPENAFFPLSGCDVAKLQWVPASDSSAEKLVAGQDW AEDCARSRLCLEDSHGTRLAVPWPEHEPPNRKSLKQQGIRVERFYFDNVRFSLTVDSPGWLLYADAFDPRWSVDIDGKPA ENWRANFAYKAVRLGPGEHSVEWHFGRGDVRPVVFKAHQALCLILIVVLVLKSAALSGTAHGARRIPGAGQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88600; Mature: 88600
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRPLILSDKQHRLNRMASSFPKFASSALGSMLSELAIASAITAVGLCLLSGYALSSDQV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LLGDGLYIYEVFYSVFSQLNQTGEIPRWLPYSAFGISADLRHLVLPFLSVPVMEAANLLG EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHC STNTWNTFLVVLAIDLWLTSVGAYLLLRQFASRSVAAVVASALVWTIVIDNNIYFSLYTF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH ITTPFTLLFIVLSVKRENLTYLAIAVVFAGLGAFLPTLYFAPYHALVYSSVTLTLAAIYR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PRFSWKLRLDFWIWTAIAVTILVAAGYLAFSSLQNIEFFAPDRDENLRSTLHDYLYYAGT CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHH FGMIKSLEPLIGVPLSGPNPLFFLTTIAVVFPLYAMFNGWSRDVVAFLFLFWLTLFFCWG HHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC PNTPVATIAYYFPGMSFFRHVGYTFAFPKLFATILTAIGLQKFVDQVSSTADARNLAALH CCCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IRPIIKVVTVASLGVGIWYVTVYKRYAPRSYFEPAMGLWLWLLLAASWLGAPMIWLICKR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH VPARHFLSGIGAVVLIQATIYQVVQTYTVFHVPLGFTKSLLETTPQPFEEARTTDILAQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCHHHHHHHHHHHHC NGRIYDHIAQIITSYAEVFSFLQIDACFTKRSRTDFSMKGVAELVRRQFGKGKNLNDLED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH AYKTSPENAFFPLSGCDVAKLQWVPASDSSAEKLVAGQDWAEDCARSRLCLEDSHGTRLA HHHCCCCCCEECCCCCCEEEEEEECCCCCCHHHHHCCCCHHHHHHHCCCEEECCCCCEEE VPWPEHEPPNRKSLKQQGIRVERFYFDNVRFSLTVDSPGWLLYADAFDPRWSVDIDGKPA CCCCCCCCCCHHHHHHCCCEEEEEEECCEEEEEEECCCCEEEEEECCCCCEEEECCCCCC ENWRANFAYKAVRLGPGEHSVEWHFGRGDVRPVVFKAHQALCLILIVVLVLKSAALSGTA CCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HGARRIPGAGQAA CCCCCCCCCCCCC >Mature Secondary Structure MQRPLILSDKQHRLNRMASSFPKFASSALGSMLSELAIASAITAVGLCLLSGYALSSDQV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LLGDGLYIYEVFYSVFSQLNQTGEIPRWLPYSAFGISADLRHLVLPFLSVPVMEAANLLG EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHC STNTWNTFLVVLAIDLWLTSVGAYLLLRQFASRSVAAVVASALVWTIVIDNNIYFSLYTF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH ITTPFTLLFIVLSVKRENLTYLAIAVVFAGLGAFLPTLYFAPYHALVYSSVTLTLAAIYR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PRFSWKLRLDFWIWTAIAVTILVAAGYLAFSSLQNIEFFAPDRDENLRSTLHDYLYYAGT CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHH FGMIKSLEPLIGVPLSGPNPLFFLTTIAVVFPLYAMFNGWSRDVVAFLFLFWLTLFFCWG HHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC PNTPVATIAYYFPGMSFFRHVGYTFAFPKLFATILTAIGLQKFVDQVSSTADARNLAALH CCCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IRPIIKVVTVASLGVGIWYVTVYKRYAPRSYFEPAMGLWLWLLLAASWLGAPMIWLICKR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH VPARHFLSGIGAVVLIQATIYQVVQTYTVFHVPLGFTKSLLETTPQPFEEARTTDILAQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCHHHHHHHHHHHHC NGRIYDHIAQIITSYAEVFSFLQIDACFTKRSRTDFSMKGVAELVRRQFGKGKNLNDLED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHH AYKTSPENAFFPLSGCDVAKLQWVPASDSSAEKLVAGQDWAEDCARSRLCLEDSHGTRLA HHHCCCCCCEECCCCCCEEEEEEECCCCCCHHHHHCCCCHHHHHHHCCCEEECCCCCEEE VPWPEHEPPNRKSLKQQGIRVERFYFDNVRFSLTVDSPGWLLYADAFDPRWSVDIDGKPA CCCCCCCCCCHHHHHHCCCEEEEEEECCEEEEEEECCCCEEEEEECCCCCEEEECCCCCC ENWRANFAYKAVRLGPGEHSVEWHFGRGDVRPVVFKAHQALCLILIVVLVLKSAALSGTA CCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HGARRIPGAGQAA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA