Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342044
Identifier: 146342044
GI number: 146342044
Start: 5391625
End: 5393685
Strand: Direct
Name: 146342044
Synonym: BRADO5183
Alternate gene names: NA
Gene position: 5391625-5393685 (Clockwise)
Preceding gene: 146342043
Following gene: 146342045
Centisome position: 72.31
GC content: 66.47
Gene sequence:
>2061_bases GTGATCGAAGCCGCACAGCCCGCTTCGCTGGGATCGCGCCGGCCATCCTCGGTGAAGGCGTGGCTGACCGCATCGGCCTT CCGGGCCTATTCCTTTCTGAGCGCCCGCCGCCGTCAGTTGCTGCCGCTGACCACACGCGCCGCCGGCCTCGTCGACCGCA GGCTCATCGCAGCGCCCGCCGGAGCTGCGATGATGCGGCTGATGGACCGCCAGCTCGCGCGCGGATCCCGGACGGGCAAG CTGCTGGCGCGGCTCACCTTGGCCACACTGGCCGCGGCCGCGCAGGTTCATCTGGCCGCCAGCCGAAAGCCGAGCGCGCT TCGCGCAGTGCGGCTCCTGAACCTGATGTTCCGGAGCAATGTGCGGGCGCGAACGGGCTTCGGTGCGCAGGCCTATTTCG CTACCCTCGCTCTGTGCAGCGCCTACGACCGGATCGTGCGCGAGGTCCCGCGGGCGGAGGCGATCGACAGCTTCGCCATC AATTTCGCGGTCGGCGTTGCCCATATGTATCGCGGCAATCTGTCGTTGGCGGCCAACTTCCTGAAGGCAGCCGCGGCCTC AGGCGACAGCAACGCGCTGCGCAAGCTCGGCGCAGTGCATGCCCTCGCCGGAACTCACGATCAAGCTGCGGAGTGCTTCG CGGCCGCGGTGGCGCGCGATCCGCGCTCGGTGATGGCGCACCAGAACTACGCCGGCGGCTACGATCCATCGACCTACACG CCGAGCACATGGGAAATCGAGCATGCGGGCGAGCTGCTGATCTACGACAATCTGATCCAGCTCGGCGAGAACTTCTACCA CCAGGGCCGCTACGAGGACACGTTCCGCTGCTACCAGCTGGCGCTCGACCAACAGGACAGGCTGGCCGCCAAATGGTCGA TCCCGGAGGGTCTCGTCCGTCGTATCGCGGCTGCAAGCGCCATCTTCGATCCCGCTCTGCCCGTCCGGCTGCTCGGCTAC GAATGGGTGACCCTGATCGGCCACATCGGCTTCATCGATTGCCACCTTCGCATGGCGGCCCTCGGACTGCTGCCGCGCGC CAACTACGTGCTGCTCGCCCCGCCGGCCAAAGTCGTCAACCAGCCGTTCCTCCGGCTGTTCGCGTCGCACGTGACGATCG TCGAGGACCCCGTTCTGGTCGACGATCTCCTGCCCTATCAGCGCTTAGTCGGGGACCAATTCATCGCGGTGCGTGGCGAC AATGGCCTTGCCGAGCCGTGGGCCCACGCGGCCTCGCGCGCCCAGGTGGCCTGGGCCGAGCAGCAGCGCGGGCCGATCGT CGAGGTCCCTTCGGACCTGATGGCATCGGGGGCCGCCAAGCTGTGCGCGGCGGGCGTGACGGCCAGCTGGTTCGTCGCGA TGCACATCCGCGAGGGCGGCTATCACGGTGACGGCCCCGGTACGACCCGACAGCACCGCTCGGCCAATGTCGGCGACTAT ATGGAGGCCATCGCCGCCATCGTCGCACGCGGCGGTGCGGTCGTGAGGCTCGGCGACCGCAGCATGACGCCCCTCGGCCA TGTGCCGGGCGTGTTCGACTATGCCCATAGCGAGATCAAGTCGGCCGAGATGGACCTCTTTCTCTGCGCCGCCGCGCGGC TGTTCGTCGGAACCACGTCGGGCCTGACCACGGCGGTGCAGGCGCTGGGAACACCGATGCTGCTGGTCAACTGCATCTCC AACGACTGTCAGTTCTGGCACGAACGCACCGACTTCACCGTGCGTCCGGTCTATGACCGGCGCGCCAAGCGCTATCTCTC CCTCAAGGAGACCTATCGGCAACCGCTGCAGGCGCTGCTCATCGATACTGCGGTGCTGGCGCGCCACGGGCTCGAGATCC ATCCCAACAGCGCGAGCGACATCACGGAGGCCGTCCGGTACAAGCTCGATTGCCTGGAGGGAACGCGCCCATCGAATTCA GCCGAGAACGAGTCGCTCACACGTTACCGTTCCGCAATGTCGCATAATCCATACAATTTCGGAGCCGCAAAACCTGTGCC CTCATTCCTCCAAACCTTTCCTGACCTACTAACGACAGACGGTCGGCTGGCCTCGGATTAA
Upstream 100 bases:
>100_bases CGACGCCCCCCTACCGCGCGCCATGACGATGCGGGCTCCCGTTGGCTCACTACGGCATCGTCTGAGCAGGCTGCAGGCCC CGGTCAGCAAACCAGCCGCC
Downstream 100 bases:
>100_bases GCCTCCGCCGCGCGGGAGTTGCGCCTGCGCAGGATGTGACCTTGCCCCTGAGGCATCATGCAATTTCACCCGCGCCGATG ATGCCGGATACGGCAGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MIEAAQPASLGSRRPSSVKAWLTASAFRAYSFLSARRRQLLPLTTRAAGLVDRRLIAAPAGAAMMRLMDRQLARGSRTGK LLARLTLATLAAAAQVHLAASRKPSALRAVRLLNLMFRSNVRARTGFGAQAYFATLALCSAYDRIVREVPRAEAIDSFAI NFAVGVAHMYRGNLSLAANFLKAAAASGDSNALRKLGAVHALAGTHDQAAECFAAAVARDPRSVMAHQNYAGGYDPSTYT PSTWEIEHAGELLIYDNLIQLGENFYHQGRYEDTFRCYQLALDQQDRLAAKWSIPEGLVRRIAAASAIFDPALPVRLLGY EWVTLIGHIGFIDCHLRMAALGLLPRANYVLLAPPAKVVNQPFLRLFASHVTIVEDPVLVDDLLPYQRLVGDQFIAVRGD NGLAEPWAHAASRAQVAWAEQQRGPIVEVPSDLMASGAAKLCAAGVTASWFVAMHIREGGYHGDGPGTTRQHRSANVGDY MEAIAAIVARGGAVVRLGDRSMTPLGHVPGVFDYAHSEIKSAEMDLFLCAAARLFVGTTSGLTTAVQALGTPMLLVNCIS NDCQFWHERTDFTVRPVYDRRAKRYLSLKETYRQPLQALLIDTAVLARHGLEIHPNSASDITEAVRYKLDCLEGTRPSNS AENESLTRYRSAMSHNPYNFGAAKPVPSFLQTFPDLLTTDGRLASD
Sequences:
>Translated_686_residues MIEAAQPASLGSRRPSSVKAWLTASAFRAYSFLSARRRQLLPLTTRAAGLVDRRLIAAPAGAAMMRLMDRQLARGSRTGK LLARLTLATLAAAAQVHLAASRKPSALRAVRLLNLMFRSNVRARTGFGAQAYFATLALCSAYDRIVREVPRAEAIDSFAI NFAVGVAHMYRGNLSLAANFLKAAAASGDSNALRKLGAVHALAGTHDQAAECFAAAVARDPRSVMAHQNYAGGYDPSTYT PSTWEIEHAGELLIYDNLIQLGENFYHQGRYEDTFRCYQLALDQQDRLAAKWSIPEGLVRRIAAASAIFDPALPVRLLGY EWVTLIGHIGFIDCHLRMAALGLLPRANYVLLAPPAKVVNQPFLRLFASHVTIVEDPVLVDDLLPYQRLVGDQFIAVRGD NGLAEPWAHAASRAQVAWAEQQRGPIVEVPSDLMASGAAKLCAAGVTASWFVAMHIREGGYHGDGPGTTRQHRSANVGDY MEAIAAIVARGGAVVRLGDRSMTPLGHVPGVFDYAHSEIKSAEMDLFLCAAARLFVGTTSGLTTAVQALGTPMLLVNCIS NDCQFWHERTDFTVRPVYDRRAKRYLSLKETYRQPLQALLIDTAVLARHGLEIHPNSASDITEAVRYKLDCLEGTRPSNS AENESLTRYRSAMSHNPYNFGAAKPVPSFLQTFPDLLTTDGRLASD >Mature_686_residues MIEAAQPASLGSRRPSSVKAWLTASAFRAYSFLSARRRQLLPLTTRAAGLVDRRLIAAPAGAAMMRLMDRQLARGSRTGK LLARLTLATLAAAAQVHLAASRKPSALRAVRLLNLMFRSNVRARTGFGAQAYFATLALCSAYDRIVREVPRAEAIDSFAI NFAVGVAHMYRGNLSLAANFLKAAAASGDSNALRKLGAVHALAGTHDQAAECFAAAVARDPRSVMAHQNYAGGYDPSTYT PSTWEIEHAGELLIYDNLIQLGENFYHQGRYEDTFRCYQLALDQQDRLAAKWSIPEGLVRRIAAASAIFDPALPVRLLGY EWVTLIGHIGFIDCHLRMAALGLLPRANYVLLAPPAKVVNQPFLRLFASHVTIVEDPVLVDDLLPYQRLVGDQFIAVRGD NGLAEPWAHAASRAQVAWAEQQRGPIVEVPSDLMASGAAKLCAAGVTASWFVAMHIREGGYHGDGPGTTRQHRSANVGDY MEAIAAIVARGGAVVRLGDRSMTPLGHVPGVFDYAHSEIKSAEMDLFLCAAARLFVGTTSGLTTAVQALGTPMLLVNCIS NDCQFWHERTDFTVRPVYDRRAKRYLSLKETYRQPLQALLIDTAVLARHGLEIHPNSASDITEAVRYKLDCLEGTRPSNS AENESLTRYRSAMSHNPYNFGAAKPVPSFLQTFPDLLTTDGRLASD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74678; Mature: 74678
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEAAQPASLGSRRPSSVKAWLTASAFRAYSFLSARRRQLLPLTTRAAGLVDRRLIAAPA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC GAAMMRLMDRQLARGSRTGKLLARLTLATLAAAAQVHLAASRKPSALRAVRLLNLMFRSN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC VRARTGFGAQAYFATLALCSAYDRIVREVPRAEAIDSFAINFAVGVAHMYRGNLSLAANF CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LKAAAASGDSNALRKLGAVHALAGTHDQAAECFAAAVARDPRSVMAHQNYAGGYDPSTYT HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC PSTWEIEHAGELLIYDNLIQLGENFYHQGRYEDTFRCYQLALDQQDRLAAKWSIPEGLVR CCCEEECCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHEECCCCHHHHH RIAAASAIFDPALPVRLLGYEWVTLIGHIGFIDCHLRMAALGLLPRANYVLLAPPAKVVN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHH QPFLRLFASHVTIVEDPVLVDDLLPYQRLVGDQFIAVRGDNGLAEPWAHAASRAQVAWAE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH QQRGPIVEVPSDLMASGAAKLCAAGVTASWFVAMHIREGGYHGDGPGTTRQHRSANVGDY HHCCCEEECCHHHHHHCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH MEAIAAIVARGGAVVRLGDRSMTPLGHVPGVFDYAHSEIKSAEMDLFLCAAARLFVGTTS HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLTTAVQALGTPMLLVNCISNDCQFWHERTDFTVRPVYDRRAKRYLSLKETYRQPLQALL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH IDTAVLARHGLEIHPNSASDITEAVRYKLDCLEGTRPSNSAENESLTRYRSAMSHNPYNF HHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC GAAKPVPSFLQTFPDLLTTDGRLASD CCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIEAAQPASLGSRRPSSVKAWLTASAFRAYSFLSARRRQLLPLTTRAAGLVDRRLIAAPA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC GAAMMRLMDRQLARGSRTGKLLARLTLATLAAAAQVHLAASRKPSALRAVRLLNLMFRSN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC VRARTGFGAQAYFATLALCSAYDRIVREVPRAEAIDSFAINFAVGVAHMYRGNLSLAANF CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LKAAAASGDSNALRKLGAVHALAGTHDQAAECFAAAVARDPRSVMAHQNYAGGYDPSTYT HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC PSTWEIEHAGELLIYDNLIQLGENFYHQGRYEDTFRCYQLALDQQDRLAAKWSIPEGLVR CCCEEECCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHEECCCCHHHHH RIAAASAIFDPALPVRLLGYEWVTLIGHIGFIDCHLRMAALGLLPRANYVLLAPPAKVVN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHH QPFLRLFASHVTIVEDPVLVDDLLPYQRLVGDQFIAVRGDNGLAEPWAHAASRAQVAWAE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH QQRGPIVEVPSDLMASGAAKLCAAGVTASWFVAMHIREGGYHGDGPGTTRQHRSANVGDY HHCCCEEECCHHHHHHCHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHH MEAIAAIVARGGAVVRLGDRSMTPLGHVPGVFDYAHSEIKSAEMDLFLCAAARLFVGTTS HHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLTTAVQALGTPMLLVNCISNDCQFWHERTDFTVRPVYDRRAKRYLSLKETYRQPLQALL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH IDTAVLARHGLEIHPNSASDITEAVRYKLDCLEGTRPSNSAENESLTRYRSAMSHNPYNF HHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCC GAAKPVPSFLQTFPDLLTTDGRLASD CCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA