Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341942
Identifier: 146341942
GI number: 146341942
Start: 5271265
End: 5271891
Strand: Reverse
Name: 146341942
Synonym: BRADO5078
Alternate gene names: NA
Gene position: 5271891-5271265 (Counterclockwise)
Preceding gene: 146341943
Following gene: 146341939
Centisome position: 70.7
GC content: 66.67
Gene sequence:
>627_bases ATGATGATGCGCAACGCGTTTCCCCGACTTCGGCTGGTGCCTGCTGCAACGACGCTCGCGCTCGGCGCGCTCGGCGCGCT CGTTGCCGCCGGCGCGCTGCCGACGCGGCCGGCGCTGGCGGCAGAGCCGACTGCCGCCGGGCTGTGGCAGAAGGTCGAGG ATGGCCGCCCGGTCGGCTGGTTTCTCTTCATCGACCACGACGGCGTGTTCGAAGGCGTGATCGCCAAGACGTTTCCGCGG CCCGGCGACAATCCCAACGAGGTCTGCTCGAAGTGCACCGACGACCGCAAGAACGCGCCCATCGTCGGCATTTCCTTCGT GCGCGACATGAAGCGCGAGGGACTGAAATATGAGGGCGGCAACGTTCTCAACCCGCGCGACGGTAACATCTGGAAGGCCA ACATGCGGGTCACGCCGGACGGGCAGTCGCTGATCCTGCACGGCTATCTCGGCATCTCGCTGTTCGGCAAGGACGAGACC TGGACCCGCCTGCCGGATACCAACATGGCGCAGATCGATCCCGCGATCCTCGCCAAATATCTCCCCGCCCAGGCGACCAC CGCCACCGCTCCGCCGACGACCAAGCAGGCACCCCCGATGATGAAGAAGCCGGCGCCGGTGAAGTAG
Upstream 100 bases:
>100_bases GTGCCGGTTTCACCGGCGCGCCAGACCTGTTATGGGCTGGAACGATGCACGAAACGGCCGTACTGTTCGGCCATTCATTT TTTGACTTGGTCAAGGTGAG
Downstream 100 bases:
>100_bases TTGGCCACGCGCGTGACGAGCGTCTCACGCGCAGTCTTTTCGCGTCGTAACGTTCTGCCGCATGACATGGTGTCGCGATC TCGCGGCGCATGGCGTCCGA
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide; Protein Conserved In Bacteria
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MMMRNAFPRLRLVPAATTLALGALGALVAAGALPTRPALAAEPTAAGLWQKVEDGRPVGWFLFIDHDGVFEGVIAKTFPR PGDNPNEVCSKCTDDRKNAPIVGISFVRDMKREGLKYEGGNVLNPRDGNIWKANMRVTPDGQSLILHGYLGISLFGKDET WTRLPDTNMAQIDPAILAKYLPAQATTATAPPTTKQAPPMMKKPAPVK
Sequences:
>Translated_208_residues MMMRNAFPRLRLVPAATTLALGALGALVAAGALPTRPALAAEPTAAGLWQKVEDGRPVGWFLFIDHDGVFEGVIAKTFPR PGDNPNEVCSKCTDDRKNAPIVGISFVRDMKREGLKYEGGNVLNPRDGNIWKANMRVTPDGQSLILHGYLGISLFGKDET WTRLPDTNMAQIDPAILAKYLPAQATTATAPPTTKQAPPMMKKPAPVK >Mature_208_residues MMMRNAFPRLRLVPAATTLALGALGALVAAGALPTRPALAAEPTAAGLWQKVEDGRPVGWFLFIDHDGVFEGVIAKTFPR PGDNPNEVCSKCTDDRKNAPIVGISFVRDMKREGLKYEGGNVLNPRDGNIWKANMRVTPDGQSLILHGYLGISLFGKDET WTRLPDTNMAQIDPAILAKYLPAQATTATAPPTTKQAPPMMKKPAPVK
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22443; Mature: 22443
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMRNAFPRLRLVPAATTLALGALGALVAAGALPTRPALAAEPTAAGLWQKVEDGRPVGW CCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE FLFIDHDGVFEGVIAKTFPRPGDNPNEVCSKCTDDRKNAPIVGISFVRDMKREGLKYEGG EEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCEECCC NVLNPRDGNIWKANMRVTPDGQSLILHGYLGISLFGKDETWTRLPDTNMAQIDPAILAKY CCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCHHHCCHHHHHHH LPAQATTATAPPTTKQAPPMMKKPAPVK CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMMRNAFPRLRLVPAATTLALGALGALVAAGALPTRPALAAEPTAAGLWQKVEDGRPVGW CCCCCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE FLFIDHDGVFEGVIAKTFPRPGDNPNEVCSKCTDDRKNAPIVGISFVRDMKREGLKYEGG EEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCEECCC NVLNPRDGNIWKANMRVTPDGQSLILHGYLGISLFGKDETWTRLPDTNMAQIDPAILAKY CCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCCCCHHHCCHHHHHHH LPAQATTATAPPTTKQAPPMMKKPAPVK CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA