Click here to switch to the map view.

The map label for this gene is yciF [H]

Identifier: 146341939

GI number: 146341939

Start: 5266340

End: 5266846

Strand: Reverse

Name: yciF [H]

Synonym: BRADO5074

Alternate gene names: 146341939

Gene position: 5266846-5266340 (Counterclockwise)

Preceding gene: 146341942

Following gene: 146341937

Centisome position: 70.63

GC content: 62.72

Gene sequence:

>507_bases
ATGGGACTGTTCACCAAAGACATCAAGACGATGAATGACCTGTTCGTGCACCAGCTGCAGGACATCTATTACGCCGAGAA
CCAGCTCATCAAGGCGCTGCCCAAGATGGCCGACAAGGCGACCGATCAGCAGCTGAAGCAGGGTTTTCTGACCCATCTCG
AGGAAACCCGCACGCATGTGAAGCGGCTCGAGCAGGTGTTCGAGATGCAGGGCATCGCGCCCAAGGCAGTCGACTGCCCG
GCGATCGACGGCATCATCGAGGAGGCCGAGGAGGTCGCCGGCGAGGTGGCCGACAAGACCGTGCTCGATGCGGCGCTGAT
CAATGCCGGCCAAGCCGCCGAGCACTACGAGATCACCCGCTATGGCAGCCTGATCGCGTGGGCCAAGCAGCTCGGCCGCA
GCGACTGCGCCGCTCTGCTGCAGAAGACGCTCGACGAGGAGAAGGCGACCGACATGAAGCTGACCAAGCTCGCCGAAACC
AGCGTCAACCTGCGCGCCGCGAGCTGA

Upstream 100 bases:

>100_bases
CGGTCGGACCGCCGGTTAGCCCAAGGCAAGACGTCGATGGACATGCACGCGGTCGGGGAGGGGCCCGCCATGTTCCGAAC
CCCGGAAGGACGTGTGACAC

Downstream 100 bases:

>100_bases
CCGCACTGGTCTCGCCTGAGACAAAACGCCGCGTGGGTCTGCCGCGCGGCGTTTTCATGCCAGCAACGCGCTCAGCTCTT
TCTCAGCGCGAAATTGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGLFTKDIKTMNDLFVHQLQDIYYAENQLIKALPKMADKATDQQLKQGFLTHLEETRTHVKRLEQVFEMQGIAPKAVDCP
AIDGIIEEAEEVAGEVADKTVLDAALINAGQAAEHYEITRYGSLIAWAKQLGRSDCAALLQKTLDEEKATDMKLTKLAET
SVNLRAAS

Sequences:

>Translated_168_residues
MGLFTKDIKTMNDLFVHQLQDIYYAENQLIKALPKMADKATDQQLKQGFLTHLEETRTHVKRLEQVFEMQGIAPKAVDCP
AIDGIIEEAEEVAGEVADKTVLDAALINAGQAAEHYEITRYGSLIAWAKQLGRSDCAALLQKTLDEEKATDMKLTKLAET
SVNLRAAS
>Mature_167_residues
GLFTKDIKTMNDLFVHQLQDIYYAENQLIKALPKMADKATDQQLKQGFLTHLEETRTHVKRLEQVFEMQGIAPKAVDCPA
IDGIIEEAEEVAGEVADKTVLDAALINAGQAAEHYEITRYGSLIAWAKQLGRSDCAALLQKTLDEEKATDMKLTKLAETS
VNLRAAS

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=161, Percent_Identity=47.8260869565217, Blast_Score=145, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18635; Mature: 18503

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFTKDIKTMNDLFVHQLQDIYYAENQLIKALPKMADKATDQQLKQGFLTHLEETRTHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLEQVFEMQGIAPKAVDCPAIDGIIEEAEEVAGEVADKTVLDAALINAGQAAEHYEITR
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YGSLIAWAKQLGRSDCAALLQKTLDEEKATDMKLTKLAETSVNLRAAS
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GLFTKDIKTMNDLFVHQLQDIYYAENQLIKALPKMADKATDQQLKQGFLTHLEETRTHV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLEQVFEMQGIAPKAVDCPAIDGIIEEAEEVAGEVADKTVLDAALINAGQAAEHYEITR
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YGSLIAWAKQLGRSDCAALLQKTLDEEKATDMKLTKLAETSVNLRAAS
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]