Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341926
Identifier: 146341926
GI number: 146341926
Start: 5251137
End: 5252753
Strand: Reverse
Name: 146341926
Synonym: BRADO5061
Alternate gene names: NA
Gene position: 5252753-5251137 (Counterclockwise)
Preceding gene: 146341927
Following gene: 146341925
Centisome position: 70.44
GC content: 69.39
Gene sequence:
>1617_bases ATGACGCCGCCTGCGATCCGGCCGGAGCTTTCCACATCGTCCCTGACCGTCATGCGAGGGCAGGGCGCGGCGACCGGTCT GCGCGATCTGTTCGCCTTGCTCGGCGATCTCCTGATCGACGGCGGCGACAGCCGCTTGGCGCTCGACCGGCCGTGGGGCC GCAACGCCTATGGCTGTCCGCCGACTCCGGCGCCTGATCTGCTGTGCCTGTCCTCGAGCACGGCCTCGCCGATCTCCGAA CGCGCCTATGCGCGGGTCGAGCTCGCGCGCGAGCAGCTGATGCACGCGGCGATCTCGCTCGGCGTCGACGAGGCGCTCGA TCGCCGCACCGAGGAGATGCGTCGCGAACTGCGCGGCCATCTTGGTCTCGCCGACGATGTCGACATCGTCTTCTCGCCGT CGGGCACCGACGCGCAGCTTCATGCGCTGGCGCTGGTGCGTGCGCAACTCGGTGACGTCGTCACGAGCGTCATCATCGGC AGCGATCAGACGGGCAGCGGCACGGCTGCAACCGCCCGCGGACGGCATTTCAGCACGCGGACCGCGAGCGGCCTCGCGGT CACCAGGGATGCTCCGATCGACGGACTTTCGGGTGACGCGGTGTTCGTCCCGCTGTTCGATGGCGCGGCGATGCAGCCGC GCAGCGACATCGACACGGTGGTGCTCGACACGGTCGCCGGCCTCGTCCGCGACGGACGCAACGTGCTGCTGCAGGTGATG GATGCCTCCAAGCTCGGCTGGCGTGCGCCGGGCTCGGCCTGCCTCGACGAGGTGGCGCGCCGCTGGCCGGAACGTGTCCA GGTGGTCGTCGATGCCTGCCAGATGCGGCTCGGAGCGGGGCGCCTGCGCGCGCATCTCGATCGCGGGCATCTGGTGCTGA TATCCGGCTCGAAATTCTTCGGCGGGCCGGCCTTCAGCGGCGCCTTGCTGGTGCCGCGCTCGGTTTCGTCGCGCAGCCAT GCCGTTGCATCCGGCTTGCTCGACTATGTCAATCGCAGCGACTGGCCGCTCGCCTGGACCGATCTGCGGGCGCGCTCGGC ACAGCGGGCCAATATCGGCCAATGGCTGCGCTGGGAAGCGGCGCTGGAGGAGATCGCGGCCTATCACGCGGTGCCCGACT CGTTCCGCCGGATGGCGATCCGTCAGCTCGGCGAGGCGATCGAGAGCCTGCTGACGCTGTCTCCGGTGCTGTGTCCGATC CCGACCCATGCCGGGGCCGACGAGACGGACGACGAATTCGCCGTCCCCACGATTTTCCCGTTCGCGCTGCAGCGCGCCGG GCAGCTGCTCGATCCCGGTGAAACGCAGGCGGTCTATCGCGCCCTGCAGCAGGATCTCGGCAGCCGCTTCAGCGGACCGG CGGCCTCGGTCGCGGCGCGGCAATGCCTGATCGGCCAGCCGGTGCGGATCGAACGCGACGGCGAGCGGCCTGCCGCAGCG CTGCGGCTGTGCATCGGCGCGCGCCAGGTCACGGACGCCTGGAGCGACGACATCACCGCCGCGCGCGTCAATCTCGAAGC CGACATCGATCGTATCGCCGATGTGGTCGCCAAGACGGAGCTGCTCGTGTCGGATCTGAGCAGTCAGGATCTCAGGGATA TCTGCCATGCCAACTGA
Upstream 100 bases:
>100_bases CATGTCGGTCCGTCCGTCTTCCACGGCAATGTCGCCTCGCAATTCGCCTCGGCCATCGCGGTCCCGACCGCCGCCGCAGA CGCCGCCTGACGATCGCGCC
Downstream 100 bases:
>100_bases TTTGCTCGCTCTGGCCGACGCCGCCGGCGCAGGATGCGCCGAGCGGATAGGCATGGCCAAGATCGCCAAGGCGGCGTTCG ACGGCCAGGACCTGAAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTPPAIRPELSTSSLTVMRGQGAATGLRDLFALLGDLLIDGGDSRLALDRPWGRNAYGCPPTPAPDLLCLSSSTASPISE RAYARVELAREQLMHAAISLGVDEALDRRTEEMRRELRGHLGLADDVDIVFSPSGTDAQLHALALVRAQLGDVVTSVIIG SDQTGSGTAATARGRHFSTRTASGLAVTRDAPIDGLSGDAVFVPLFDGAAMQPRSDIDTVVLDTVAGLVRDGRNVLLQVM DASKLGWRAPGSACLDEVARRWPERVQVVVDACQMRLGAGRLRAHLDRGHLVLISGSKFFGGPAFSGALLVPRSVSSRSH AVASGLLDYVNRSDWPLAWTDLRARSAQRANIGQWLRWEAALEEIAAYHAVPDSFRRMAIRQLGEAIESLLTLSPVLCPI PTHAGADETDDEFAVPTIFPFALQRAGQLLDPGETQAVYRALQQDLGSRFSGPAASVAARQCLIGQPVRIERDGERPAAA LRLCIGARQVTDAWSDDITAARVNLEADIDRIADVVAKTELLVSDLSSQDLRDICHAN
Sequences:
>Translated_538_residues MTPPAIRPELSTSSLTVMRGQGAATGLRDLFALLGDLLIDGGDSRLALDRPWGRNAYGCPPTPAPDLLCLSSSTASPISE RAYARVELAREQLMHAAISLGVDEALDRRTEEMRRELRGHLGLADDVDIVFSPSGTDAQLHALALVRAQLGDVVTSVIIG SDQTGSGTAATARGRHFSTRTASGLAVTRDAPIDGLSGDAVFVPLFDGAAMQPRSDIDTVVLDTVAGLVRDGRNVLLQVM DASKLGWRAPGSACLDEVARRWPERVQVVVDACQMRLGAGRLRAHLDRGHLVLISGSKFFGGPAFSGALLVPRSVSSRSH AVASGLLDYVNRSDWPLAWTDLRARSAQRANIGQWLRWEAALEEIAAYHAVPDSFRRMAIRQLGEAIESLLTLSPVLCPI PTHAGADETDDEFAVPTIFPFALQRAGQLLDPGETQAVYRALQQDLGSRFSGPAASVAARQCLIGQPVRIERDGERPAAA LRLCIGARQVTDAWSDDITAARVNLEADIDRIADVVAKTELLVSDLSSQDLRDICHAN >Mature_537_residues TPPAIRPELSTSSLTVMRGQGAATGLRDLFALLGDLLIDGGDSRLALDRPWGRNAYGCPPTPAPDLLCLSSSTASPISER AYARVELAREQLMHAAISLGVDEALDRRTEEMRRELRGHLGLADDVDIVFSPSGTDAQLHALALVRAQLGDVVTSVIIGS DQTGSGTAATARGRHFSTRTASGLAVTRDAPIDGLSGDAVFVPLFDGAAMQPRSDIDTVVLDTVAGLVRDGRNVLLQVMD ASKLGWRAPGSACLDEVARRWPERVQVVVDACQMRLGAGRLRAHLDRGHLVLISGSKFFGGPAFSGALLVPRSVSSRSHA VASGLLDYVNRSDWPLAWTDLRARSAQRANIGQWLRWEAALEEIAAYHAVPDSFRRMAIRQLGEAIESLLTLSPVLCPIP THAGADETDDEFAVPTIFPFALQRAGQLLDPGETQAVYRALQQDLGSRFSGPAASVAARQCLIGQPVRIERDGERPAAAL RLCIGARQVTDAWSDDITAARVNLEADIDRIADVVAKTELLVSDLSSQDLRDICHAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57656; Mature: 57525
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPAIRPELSTSSLTVMRGQGAATGLRDLFALLGDLLIDGGDSRLALDRPWGRNAYGCP CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC PTPAPDLLCLSSSTASPISERAYARVELAREQLMHAAISLGVDEALDRRTEEMRRELRGH CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC LGLADDVDIVFSPSGTDAQLHALALVRAQLGDVVTSVIIGSDQTGSGTAATARGRHFSTR CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCC TASGLAVTRDAPIDGLSGDAVFVPLFDGAAMQPRSDIDTVVLDTVAGLVRDGRNVLLQVM CCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH DASKLGWRAPGSACLDEVARRWPERVQVVVDACQMRLGAGRLRAHLDRGHLVLISGSKFF HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEECCCCC GGPAFSGALLVPRSVSSRSHAVASGLLDYVNRSDWPLAWTDLRARSAQRANIGQWLRWEA CCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHH ALEEIAAYHAVPDSFRRMAIRQLGEAIESLLTLSPVLCPIPTHAGADETDDEFAVPTIFP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH FALQRAGQLLDPGETQAVYRALQQDLGSRFSGPAASVAARQCLIGQPVRIERDGERPAAA HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHH LRLCIGARQVTDAWSDDITAARVNLEADIDRIADVVAKTELLVSDLSSQDLRDICHAN HHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure TPPAIRPELSTSSLTVMRGQGAATGLRDLFALLGDLLIDGGDSRLALDRPWGRNAYGCP CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC PTPAPDLLCLSSSTASPISERAYARVELAREQLMHAAISLGVDEALDRRTEEMRRELRGH CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC LGLADDVDIVFSPSGTDAQLHALALVRAQLGDVVTSVIIGSDQTGSGTAATARGRHFSTR CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCC TASGLAVTRDAPIDGLSGDAVFVPLFDGAAMQPRSDIDTVVLDTVAGLVRDGRNVLLQVM CCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH DASKLGWRAPGSACLDEVARRWPERVQVVVDACQMRLGAGRLRAHLDRGHLVLISGSKFF HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEECCCCC GGPAFSGALLVPRSVSSRSHAVASGLLDYVNRSDWPLAWTDLRARSAQRANIGQWLRWEA CCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHH ALEEIAAYHAVPDSFRRMAIRQLGEAIESLLTLSPVLCPIPTHAGADETDDEFAVPTIFP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH FALQRAGQLLDPGETQAVYRALQQDLGSRFSGPAASVAARQCLIGQPVRIERDGERPAAA HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHH LRLCIGARQVTDAWSDDITAARVNLEADIDRIADVVAKTELLVSDLSSQDLRDICHAN HHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA