Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341927
Identifier: 146341927
GI number: 146341927
Start: 5252764
End: 5253567
Strand: Reverse
Name: 146341927
Synonym: BRADO5062
Alternate gene names: NA
Gene position: 5253567-5252764 (Counterclockwise)
Preceding gene: 146341928
Following gene: 146341926
Centisome position: 70.46
GC content: 65.8
Gene sequence:
>804_bases GTGAGTAACGCGACCGACGAGCGGATCCATCTGGTGATCGCGACGCCATGCTTCGGCGGGCAGGTGTCGAGCATCTATGC GAGCTCGATCTTCGCCCTGCAGCGCGCGCTGCGCGCGACCTCCAATGTCGATCTGACGGTCCACATGCGCGACGGCGACG CGCTGATCACCCGCGCCCGGGCGAACCTGGTCACGCTGTTCCTCAACGACCCCACCGCGACGCATCTGCTGTTCGTCGAT GCCGACATCGGCTTCACACCGAAGCAGGTGTTCCGGCTGATCGAGTCCGGCGGCGACATGGTGGCCGGTGTCTATCCGGT CAAAAAGGTCAACTGGACCAAGGCGCGCCGCGCCATCCACGACAACCGCATGGACGTGCCCGCGGCCTCGCTCGACTATG TGCTGGAGATCGAGAATCCCGATCACGTCGCGGTGGTCAACGGTTTCACCCGCGTGCGCTATGCCGGCACCGGCTTCCTG ATGATCCGCCGCCGCGTCATCGAGGCGATGATCGCGCACCCGGCCTATGCACAGCTGCAATTCTTCCGCGAGCACTCGCA GGACGCGCTGGCCGGCAGCCCGAACCGCTTCGCGCTGTTCGAATGCCTGATCGACCCGGAGACCGGCACCTATCTCAGCG AGGACTTCGCGTTCTGCAAGCGCTGGACCGATCTCGGCGGCGAGATCTGGGCCGATCTCGACAGCCGTCTCGATCATGTC GGTCCGTCCGTCTTCCACGGCAATGTCGCCTCGCAATTCGCCTCGGCCATCGCGGTCCCGACCGCCGCCGCAGACGCCGC CTGA
Upstream 100 bases:
>100_bases ACCTGTAAAAAAACGGGGACGGTGGTTAAGTTCTCGTTAACCACGTCTCTTTAGCTTTTGTTCAGATTTGAGGCGGGAGC CTCTGCATCTGGAGGCTGAC
Downstream 100 bases:
>100_bases CGATCGCGCCATGACGCCGCCTGCGATCCGGCCGGAGCTTTCCACATCGTCCCTGACCGTCATGCGAGGGCAGGGCGCGG CGACCGGTCTGCGCGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSNATDERIHLVIATPCFGGQVSSIYASSIFALQRALRATSNVDLTVHMRDGDALITRARANLVTLFLNDPTATHLLFVD ADIGFTPKQVFRLIESGGDMVAGVYPVKKVNWTKARRAIHDNRMDVPAASLDYVLEIENPDHVAVVNGFTRVRYAGTGFL MIRRRVIEAMIAHPAYAQLQFFREHSQDALAGSPNRFALFECLIDPETGTYLSEDFAFCKRWTDLGGEIWADLDSRLDHV GPSVFHGNVASQFASAIAVPTAAADAA
Sequences:
>Translated_267_residues MSNATDERIHLVIATPCFGGQVSSIYASSIFALQRALRATSNVDLTVHMRDGDALITRARANLVTLFLNDPTATHLLFVD ADIGFTPKQVFRLIESGGDMVAGVYPVKKVNWTKARRAIHDNRMDVPAASLDYVLEIENPDHVAVVNGFTRVRYAGTGFL MIRRRVIEAMIAHPAYAQLQFFREHSQDALAGSPNRFALFECLIDPETGTYLSEDFAFCKRWTDLGGEIWADLDSRLDHV GPSVFHGNVASQFASAIAVPTAAADAA >Mature_266_residues SNATDERIHLVIATPCFGGQVSSIYASSIFALQRALRATSNVDLTVHMRDGDALITRARANLVTLFLNDPTATHLLFVDA DIGFTPKQVFRLIESGGDMVAGVYPVKKVNWTKARRAIHDNRMDVPAASLDYVLEIENPDHVAVVNGFTRVRYAGTGFLM IRRRVIEAMIAHPAYAQLQFFREHSQDALAGSPNRFALFECLIDPETGTYLSEDFAFCKRWTDLGGEIWADLDSRLDHVG PSVFHGNVASQFASAIAVPTAAADAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29313; Mature: 29181
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNATDERIHLVIATPCFGGQVSSIYASSIFALQRALRATSNVDLTVHMRDGDALITRAR CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEC ANLVTLFLNDPTATHLLFVDADIGFTPKQVFRLIESGGDMVAGVYPVKKVNWTKARRAIH CEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH DNRMDVPAASLDYVLEIENPDHVAVVNGFTRVRYAGTGFLMIRRRVIEAMIAHPAYAQLQ CCCCCCCCCCCEEEEEECCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHH FFREHSQDALAGSPNRFALFECLIDPETGTYLSEDFAFCKRWTDLGGEIWADLDSRLDHV HHHHCCCHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GPSVFHGNVASQFASAIAVPTAAADAA CCHHEECHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SNATDERIHLVIATPCFGGQVSSIYASSIFALQRALRATSNVDLTVHMRDGDALITRAR CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEC ANLVTLFLNDPTATHLLFVDADIGFTPKQVFRLIESGGDMVAGVYPVKKVNWTKARRAIH CEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH DNRMDVPAASLDYVLEIENPDHVAVVNGFTRVRYAGTGFLMIRRRVIEAMIAHPAYAQLQ CCCCCCCCCCCEEEEEECCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHH FFREHSQDALAGSPNRFALFECLIDPETGTYLSEDFAFCKRWTDLGGEIWADLDSRLDHV HHHHCCCHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GPSVFHGNVASQFASAIAVPTAAADAA CCHHEECHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA