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The map label for this gene is yedE [H]

Identifier: 146341843

GI number: 146341843

Start: 5165685

End: 5166926

Strand: Reverse

Name: yedE [H]

Synonym: BRADO4973

Alternate gene names: 146341843

Gene position: 5166926-5165685 (Counterclockwise)

Preceding gene: 146341844

Following gene: 146341841

Centisome position: 69.29

GC content: 69.4

Gene sequence:

>1242_bases
ATGACCGACCTCTCCATCGACGCGCGGCTGCTCGCGCCGGACAATCACCGCCACCATTCGAACATGCCGGTCGTGGCGAT
CGCCTCCGCAGCCTTGCTCCTCGGCGCATTGGCGCTGAGCGCGTCCTTCACGTGGCGGCAGGGCGTGCTGTTCCTGGTCG
GCGGCGGGCTCGGCCTGTCGCTGTACCACGCGCTGTTCGGCTTCACCTCGGCGTGGCGCGTATTCATCGCCGCGCGCCGC
GGCGCCGGCTTGCGGGCGCAGATGGTGATGCTCGCGATCGCGGTGGTCCTGTTCTTTCCCGCGCTCGCGCATGGCACGCT
GTTCGGTCAGCCCGTGCATGGGGAATACGGCGCGGTCGGCGTCGGCATGCTCACCGGCGCCTTCCTGTTCGGGCTGGGCA
TGCAGATGGGCGGCGCCTGCGCCTCGGGCACGCTGTACACCGCGGGCGGTGGCAACACCCGCATGCTCGTGACCTTGGCC
GCCTTCATCGCGGGATCGACGATCGGCGCGCGGCACCTGCCGTGGTGGAGCGCGCAGCCGAACATCGGCGCGGTGTCGCT
GATCGACACGCTCGGCTGGATGCCGGGGCTGGCGCTCTGCCTCGTTTTGATGGCCGGGATCTATCTATTCACAGTGCAGG
CCGAGAAGCGCACCTATGGCCGGCTCGAGCCTGGCGCACGGACTGATCTCACCGGTGTCCGCCGCTTCCTGCAGGGACCA
TGGCCGCTGTTGTGGGGCGCCGTCGCGCTCGCGCTCGGCAATTTCGCAACGCTGTATTTGGACGGCCGACCCTGGGGCAT
CACCTCGGCGTTCGCGCTATGGGGCTCGAAGATCGCGATGGCGCTCGGCGCCGACGTGGCCTCCTGGGGCTATTGGCAGG
GCGCACGCGCCGCCTCGCTGCAGCAGAGCATCTTCTCCGATATCACCTCGGTGATGGATTTCGGCATCATGCTCGGCGCG
CTGCTGGCCGCGGGCTTGTCCGGCAAGTTCAACCCGACCTGGCGCCTGCCGCTGCCCTCGCTGCTCGCCGCCATCGTCGG
CGGCCTGCTGCTCGGCTATGGCGCGCGGCTCGCCTATGGCTGCAACATCGGCGCTTATTTCAGCGGCATCGCCTCGGGCA
GCCTGCACGGCTGGTGCTGGCTGGTCGCGGCCTTCATCGGCAACATCATCGGCACGCGGCTGCGCCCGCTGTTCGGGCTG
ACGGTCGAGCGCGGGCCGGTGCCGATTGCGAAGCCGGCCTGA

Upstream 100 bases:

>100_bases
TACTGGATCGCCCGGTCAAGCCGGGCGACGACAGCTGTGGCTGGAACGGCCCGCAGCAGCGGCTGTTAGCCCACGTCAAC
CCATCACTTCCGGAACTGTC

Downstream 100 bases:

>100_bases
GTCAGCCGATGCGTAGCTCGTACTGCGCGGCGTGCGGTTCATAGCGGCTGAGCAGCTTGCGGGCGGCCGGCGGCACGACG
GCTTCCTTCGAAGGTCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTDLSIDARLLAPDNHRHHSNMPVVAIASAALLLGALALSASFTWRQGVLFLVGGGLGLSLYHALFGFTSAWRVFIAARR
GAGLRAQMVMLAIAVVLFFPALAHGTLFGQPVHGEYGAVGVGMLTGAFLFGLGMQMGGACASGTLYTAGGGNTRMLVTLA
AFIAGSTIGARHLPWWSAQPNIGAVSLIDTLGWMPGLALCLVLMAGIYLFTVQAEKRTYGRLEPGARTDLTGVRRFLQGP
WPLLWGAVALALGNFATLYLDGRPWGITSAFALWGSKIAMALGADVASWGYWQGARAASLQQSIFSDITSVMDFGIMLGA
LLAAGLSGKFNPTWRLPLPSLLAAIVGGLLLGYGARLAYGCNIGAYFSGIASGSLHGWCWLVAAFIGNIIGTRLRPLFGL
TVERGPVPIAKPA

Sequences:

>Translated_413_residues
MTDLSIDARLLAPDNHRHHSNMPVVAIASAALLLGALALSASFTWRQGVLFLVGGGLGLSLYHALFGFTSAWRVFIAARR
GAGLRAQMVMLAIAVVLFFPALAHGTLFGQPVHGEYGAVGVGMLTGAFLFGLGMQMGGACASGTLYTAGGGNTRMLVTLA
AFIAGSTIGARHLPWWSAQPNIGAVSLIDTLGWMPGLALCLVLMAGIYLFTVQAEKRTYGRLEPGARTDLTGVRRFLQGP
WPLLWGAVALALGNFATLYLDGRPWGITSAFALWGSKIAMALGADVASWGYWQGARAASLQQSIFSDITSVMDFGIMLGA
LLAAGLSGKFNPTWRLPLPSLLAAIVGGLLLGYGARLAYGCNIGAYFSGIASGSLHGWCWLVAAFIGNIIGTRLRPLFGL
TVERGPVPIAKPA
>Mature_412_residues
TDLSIDARLLAPDNHRHHSNMPVVAIASAALLLGALALSASFTWRQGVLFLVGGGLGLSLYHALFGFTSAWRVFIAARRG
AGLRAQMVMLAIAVVLFFPALAHGTLFGQPVHGEYGAVGVGMLTGAFLFGLGMQMGGACASGTLYTAGGGNTRMLVTLAA
FIAGSTIGARHLPWWSAQPNIGAVSLIDTLGWMPGLALCLVLMAGIYLFTVQAEKRTYGRLEPGARTDLTGVRRFLQGPW
PLLWGAVALALGNFATLYLDGRPWGITSAFALWGSKIAMALGADVASWGYWQGARAASLQQSIFSDITSVMDFGIMLGAL
LAAGLSGKFNPTWRLPLPSLLAAIVGGLLLGYGARLAYGCNIGAYFSGIASGSLHGWCWLVAAFIGNIIGTRLRPLFGLT
VERGPVPIAKPA

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=169, Percent_Identity=35.5029585798817, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 43279; Mature: 43148

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLSIDARLLAPDNHRHHSNMPVVAIASAALLLGALALSASFTWRQGVLFLVGGGLGLS
CCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCHHHH
LYHALFGFTSAWRVFIAARRGAGLRAQMVMLAIAVVLFFPALAHGTLFGQPVHGEYGAVG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
VGMLTGAFLFGLGMQMGGACASGTLYTAGGGNTRMLVTLAAFIAGSTIGARHLPWWSAQP
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NIGAVSLIDTLGWMPGLALCLVLMAGIYLFTVQAEKRTYGRLEPGARTDLTGVRRFLQGP
CCCHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEHHHHHCCCCCCCCCCCHHHHHHHHCCC
WPLLWGAVALALGNFATLYLDGRPWGITSAFALWGSKIAMALGADVASWGYWQGARAASL
HHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHH
QQSIFSDITSVMDFGIMLGALLAAGLSGKFNPTWRLPLPSLLAAIVGGLLLGYGARLAYG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHEEC
CNIGAYFSGIASGSLHGWCWLVAAFIGNIIGTRLRPLFGLTVERGPVPIAKPA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCC
>Mature Secondary Structure 
TDLSIDARLLAPDNHRHHSNMPVVAIASAALLLGALALSASFTWRQGVLFLVGGGLGLS
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEECCHHHH
LYHALFGFTSAWRVFIAARRGAGLRAQMVMLAIAVVLFFPALAHGTLFGQPVHGEYGAVG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
VGMLTGAFLFGLGMQMGGACASGTLYTAGGGNTRMLVTLAAFIAGSTIGARHLPWWSAQP
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NIGAVSLIDTLGWMPGLALCLVLMAGIYLFTVQAEKRTYGRLEPGARTDLTGVRRFLQGP
CCCHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEHHHHHCCCCCCCCCCCHHHHHHHHCCC
WPLLWGAVALALGNFATLYLDGRPWGITSAFALWGSKIAMALGADVASWGYWQGARAASL
HHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHH
QQSIFSDITSVMDFGIMLGALLAAGLSGKFNPTWRLPLPSLLAAIVGGLLLGYGARLAYG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCHHEEC
CNIGAYFSGIASGSLHGWCWLVAAFIGNIIGTRLRPLFGLTVERGPVPIAKPA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]