| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pleC [H]
Identifier: 146341839
GI number: 146341839
Start: 5160446
End: 5162770
Strand: Direct
Name: pleC [H]
Synonym: BRADO4968
Alternate gene names: 146341839
Gene position: 5160446-5162770 (Clockwise)
Preceding gene: 146341838
Following gene: 146341842
Centisome position: 69.21
GC content: 66.19
Gene sequence:
>2325_bases ATGGCGCGTGCGCATGCCGCGAACGCGTGCGTCCAATCTTCTGATTCCATCAAGGGGTTGGCGCAATCGATCGCGAAACC GGCCTATCAGAGGCTGCTGACTGCTGAGCCGGTATTGCGTCGTGCTGTCCCCACTTTGATCATTGCCTTTCTCGTCACCA TCTGCCTCGGCGCCTTTGTCCAGGTGCTGGATCACAGCCGGCAGAAGCGCGGCGCGACCAAGCGCGACCTCGCGGCGATC TCGGACCTGCTGGCCGATCGGATCGGCCACATCGCCATGCGTCCGGACCGCATCGCCAACATCGAGCATCTGCAGGCTTT GCTGCCGGATCTCATTCCGGCCTGGGGCTCCGCACCCGGCCGCCACGTCATCGTCACCGGCGCCGATCACCGCATCCTCG CCCGCGTGCCGGTCGACACCGGTCTCGGCGAGAACGACCGCATCCTCGACCTGATCTCGACCGCGCAGCTCTTGGCCACG CCCGGCCTGCAGGGCGCGGTCACCGAGATCACGCTGCCGAATGGCCGGCCCGCCTTCGCCGTGTCGCAGCTGATCAAGGC GCTGCCCGGCCGCGTCGTCGTGATCCAGGAGAAGCTCGAGCCGATCTGGGGTTCGGATGCCGCGCTGTCGATCACACTGT CGGCGACGACCGGCTTCGTCGTCCTGATCCTCGGCTTCGCCTTCCACTGGCAGTCGACCCGCGCCCGCGAGGGCGACCTG ATCAACGACGCCGTGCGCGGCCGCATCGACACCGCGCTCAACCGCGGCCGCTGCGGCCTGTGGGACTGGGACCTGTCGCG CGGCCGGATCTTCTGGTCGAACTCGATGTTCGCGATGCTCGGCCTCGACAACCGCACCGACCTGCTCACCTTCGGGGAGG TCAACGCGCTGGTGAACTCCGACGACATCGACCTGTTCGCGATCGCCGACCAGCTCGTCGCCGGCGAGCTCCGCCACATC GACCAGAGCTTCCGCATGCGCCACACCGAGGGCCACTGGATCTGGCTGCGGGTGCGCTGCGAGCTCTCCCAGGGCACCAC GGACTCCGGCCTGCACCTGATCGGCATCGCCGTCGACGTCACCGAGCAGAAGAGCCTGGTCGAGAAGACCGTCGAGGCCG ACTTGCGGCTGCGCGACGCCATCGAGACGATCTCGGAAGCATTCGTTCTCTGGGACTCCAACAACCGCCTCGTGCTGTGC AACTCGCACTTCCAGAAGCTGCACAAGCTGCCGGACTCCGCCGTCACCCCCGGCACGTCCTATGAGACCGTGATCGAGGT CGGCAAGATGCCGGAGATCCGCACAAGGCTGCACGACAACAGCCAGCAGGCGCAGGGCGGCCGCACCTTCGAGGCGCAGC TCGACGATGGCAGCTGGCTGCACATCTCCGAGCGCCGCACCAAGGACGGCGGCTACGTCTCGGTCGGCACCGACATCACC CGCATCAAGGAGCACGAGCAGAAGCTCGTCGACAACGACCTCCGTCTGCGCGCCACCGTCATCGACCTGCAGCGCTCGCA GAGCGCGCTGGAGCGTCAGGCGATCGAGCTCGCCGATCTCGCAGAGAAATACTCGCAGGAAAAGACACGGGCCGAGGAAG CCAACCAGACCAAGTCGAAATTCCTCGCCAATATGAGCCACGAGCTGCGCACGCCGCTCAACGCCATCATCGGCTTCTCC GAGATCATGGGTTCGGGCATGTTCGGCTCGCTCGGCTCGGAGAAGTATCAGGAATACTGCCACGACATCCTGACCTCGGG TCAGTATCTGCTCGAGGTGATCAACGACATCCTCGACATGTCGAAGATCGAGGCCGGCCGCATGAAGCTCGACATGGAGC CGCTCGATCTCGCCAAGACGCTCGCGGAATCGCTGCGCGTCGTCTCCGGCCGCGCCCAGGACAAGAGCCTGGTGCTCGAT GCCGATATCGAGGGCAACATCCCGGTCATCGCCGACCGCCGCGCCACCAAGCAGATCATGGTGAACCTGCTGTCGAATGC GGTGAAGTTCACCCCCGAAGGCGGCCGCGTCACGATGCGCAGCCGGGTGTTCGAGGACAAGGTGGTGCTGATCATCGCCG ACACCGGCATCGGCATCCCCGCGCAGTCGCTGGCCCGGCTCGGCCGTCCGTTCGAGCAGGTCGAGAGCCAGATGACCAAG ACCTATCACGGCTCCGGCCTTGGCCTCGCCATCGCCCGCTCGCTGGCACAGCTGCACGGCGGCTCGATGCGCCTGCGCTC ACGCCTCGAACACGGCACCGTCGTCCGCGTCACCCTCCCCCGCGACGCCTACAAGGCCACAGCGAGCATCTCGGTCGCGG CGTGA
Upstream 100 bases:
>100_bases CGACAGCCCGAGAAATCTGGATTCAAATCAACTTGATTCGGAAGCGGCTGGGGCTCTTTCGAAATTCGGGTATCCAAGGA AAGTTTCGGGGGTCTACAGC
Downstream 100 bases:
>100_bases GCGGCGTGCGCTGCTGAGCGACCACGAAGAGCGCCATCGTAGAGCTTGTGAGCCAATTTGAGTTCAGGGCTGAGTTTGCG ACGAGGGGGCTGTCGCCGCG
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 774; Mature: 773
Protein sequence:
>774_residues MARAHAANACVQSSDSIKGLAQSIAKPAYQRLLTAEPVLRRAVPTLIIAFLVTICLGAFVQVLDHSRQKRGATKRDLAAI SDLLADRIGHIAMRPDRIANIEHLQALLPDLIPAWGSAPGRHVIVTGADHRILARVPVDTGLGENDRILDLISTAQLLAT PGLQGAVTEITLPNGRPAFAVSQLIKALPGRVVVIQEKLEPIWGSDAALSITLSATTGFVVLILGFAFHWQSTRAREGDL INDAVRGRIDTALNRGRCGLWDWDLSRGRIFWSNSMFAMLGLDNRTDLLTFGEVNALVNSDDIDLFAIADQLVAGELRHI DQSFRMRHTEGHWIWLRVRCELSQGTTDSGLHLIGIAVDVTEQKSLVEKTVEADLRLRDAIETISEAFVLWDSNNRLVLC NSHFQKLHKLPDSAVTPGTSYETVIEVGKMPEIRTRLHDNSQQAQGGRTFEAQLDDGSWLHISERRTKDGGYVSVGTDIT RIKEHEQKLVDNDLRLRATVIDLQRSQSALERQAIELADLAEKYSQEKTRAEEANQTKSKFLANMSHELRTPLNAIIGFS EIMGSGMFGSLGSEKYQEYCHDILTSGQYLLEVINDILDMSKIEAGRMKLDMEPLDLAKTLAESLRVVSGRAQDKSLVLD ADIEGNIPVIADRRATKQIMVNLLSNAVKFTPEGGRVTMRSRVFEDKVVLIIADTGIGIPAQSLARLGRPFEQVESQMTK TYHGSGLGLAIARSLAQLHGGSMRLRSRLEHGTVVRVTLPRDAYKATASISVAA
Sequences:
>Translated_774_residues MARAHAANACVQSSDSIKGLAQSIAKPAYQRLLTAEPVLRRAVPTLIIAFLVTICLGAFVQVLDHSRQKRGATKRDLAAI SDLLADRIGHIAMRPDRIANIEHLQALLPDLIPAWGSAPGRHVIVTGADHRILARVPVDTGLGENDRILDLISTAQLLAT PGLQGAVTEITLPNGRPAFAVSQLIKALPGRVVVIQEKLEPIWGSDAALSITLSATTGFVVLILGFAFHWQSTRAREGDL INDAVRGRIDTALNRGRCGLWDWDLSRGRIFWSNSMFAMLGLDNRTDLLTFGEVNALVNSDDIDLFAIADQLVAGELRHI DQSFRMRHTEGHWIWLRVRCELSQGTTDSGLHLIGIAVDVTEQKSLVEKTVEADLRLRDAIETISEAFVLWDSNNRLVLC NSHFQKLHKLPDSAVTPGTSYETVIEVGKMPEIRTRLHDNSQQAQGGRTFEAQLDDGSWLHISERRTKDGGYVSVGTDIT RIKEHEQKLVDNDLRLRATVIDLQRSQSALERQAIELADLAEKYSQEKTRAEEANQTKSKFLANMSHELRTPLNAIIGFS EIMGSGMFGSLGSEKYQEYCHDILTSGQYLLEVINDILDMSKIEAGRMKLDMEPLDLAKTLAESLRVVSGRAQDKSLVLD ADIEGNIPVIADRRATKQIMVNLLSNAVKFTPEGGRVTMRSRVFEDKVVLIIADTGIGIPAQSLARLGRPFEQVESQMTK TYHGSGLGLAIARSLAQLHGGSMRLRSRLEHGTVVRVTLPRDAYKATASISVAA >Mature_773_residues ARAHAANACVQSSDSIKGLAQSIAKPAYQRLLTAEPVLRRAVPTLIIAFLVTICLGAFVQVLDHSRQKRGATKRDLAAIS DLLADRIGHIAMRPDRIANIEHLQALLPDLIPAWGSAPGRHVIVTGADHRILARVPVDTGLGENDRILDLISTAQLLATP GLQGAVTEITLPNGRPAFAVSQLIKALPGRVVVIQEKLEPIWGSDAALSITLSATTGFVVLILGFAFHWQSTRAREGDLI NDAVRGRIDTALNRGRCGLWDWDLSRGRIFWSNSMFAMLGLDNRTDLLTFGEVNALVNSDDIDLFAIADQLVAGELRHID QSFRMRHTEGHWIWLRVRCELSQGTTDSGLHLIGIAVDVTEQKSLVEKTVEADLRLRDAIETISEAFVLWDSNNRLVLCN SHFQKLHKLPDSAVTPGTSYETVIEVGKMPEIRTRLHDNSQQAQGGRTFEAQLDDGSWLHISERRTKDGGYVSVGTDITR IKEHEQKLVDNDLRLRATVIDLQRSQSALERQAIELADLAEKYSQEKTRAEEANQTKSKFLANMSHELRTPLNAIIGFSE IMGSGMFGSLGSEKYQEYCHDILTSGQYLLEVINDILDMSKIEAGRMKLDMEPLDLAKTLAESLRVVSGRAQDKSLVLDA DIEGNIPVIADRRATKQIMVNLLSNAVKFTPEGGRVTMRSRVFEDKVVLIIADTGIGIPAQSLARLGRPFEQVESQMTKT YHGSGLGLAIARSLAQLHGGSMRLRSRLEHGTVVRVTLPRDAYKATASISVAA
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=261, Percent_Identity=38.3141762452107, Blast_Score=156, Evalue=4e-39, Organism=Escherichia coli, GI87081816, Length=273, Percent_Identity=35.5311355311355, Blast_Score=142, Evalue=1e-34, Organism=Escherichia coli, GI48994928, Length=232, Percent_Identity=37.0689655172414, Blast_Score=129, Evalue=7e-31, Organism=Escherichia coli, GI1788713, Length=301, Percent_Identity=31.8936877076412, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI145693157, Length=246, Percent_Identity=34.1463414634146, Blast_Score=124, Evalue=3e-29, Organism=Escherichia coli, GI1786600, Length=235, Percent_Identity=29.3617021276596, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1788393, Length=249, Percent_Identity=27.3092369477912, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1786783, Length=250, Percent_Identity=26.8, Blast_Score=93, Evalue=6e-20, Organism=Escherichia coli, GI1790861, Length=247, Percent_Identity=28.7449392712551, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI87082128, Length=223, Percent_Identity=28.2511210762332, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1788279, Length=226, Percent_Identity=25.6637168141593, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1788549, Length=273, Percent_Identity=24.1758241758242, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=24.5762711864407, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1790346, Length=258, Percent_Identity=24.4186046511628, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 85170; Mature: 85038
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS50113 PAC ; PS50109 HIS_KIN ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAHAANACVQSSDSIKGLAQSIAKPAYQRLLTAEPVLRRAVPTLIIAFLVTICLGAFV CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVLDHSRQKRGATKRDLAAISDLLADRIGHIAMRPDRIANIEHLQALLPDLIPAWGSAPG HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCHHHCCHHHHHHHHHHHHHHCCCCCC RHVIVTGADHRILARVPVDTGLGENDRILDLISTAQLLATPGLQGAVTEITLPNGRPAFA CEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHH VSQLIKALPGRVVVIQEKLEPIWGSDAALSITLSATTGFVVLILGFAFHWQSTRAREGDL HHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCH INDAVRGRIDTALNRGRCGLWDWDLSRGRIFWSNSMFAMLGLDNRTDLLTFGEVNALVNS HHHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCEEEEEECCCCCCEEEECCHHHEECC DDIDLFAIADQLVAGELRHIDQSFRMRHTEGHWIWLRVRCELSQGTTDSGLHLIGIAVDV CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEC TEQKSLVEKTVEADLRLRDAIETISEAFVLWDSNNRLVLCNSHFQKLHKLPDSAVTPGTS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECHHHHHHHCCCCCCCCCCCC YETVIEVGKMPEIRTRLHDNSQQAQGGRTFEAQLDDGSWLHISERRTKDGGYVSVGTDIT HHHHHHHCCCCHHHHHHCCCCHHCCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCHH RIKEHEQKLVDNDLRLRATVIDLQRSQSALERQAIELADLAEKYSQEKTRAEEANQTKSK HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLANMSHELRTPLNAIIGFSEIMGSGMFGSLGSEKYQEYCHDILTSGQYLLEVINDILDM HHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH SKIEAGRMKLDMEPLDLAKTLAESLRVVSGRAQDKSLVLDADIEGNIPVIADRRATKQIM HHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCHHHHHHH VNLLSNAVKFTPEGGRVTMRSRVFEDKVVLIIADTGIGIPAQSLARLGRPFEQVESQMTK HHHHHHHHEECCCCCEEEHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHH TYHGSGLGLAIARSLAQLHGGSMRLRSRLEHGTVVRVTLPRDAYKATASISVAA HHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHCCCEEEECC >Mature Secondary Structure ARAHAANACVQSSDSIKGLAQSIAKPAYQRLLTAEPVLRRAVPTLIIAFLVTICLGAFV CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVLDHSRQKRGATKRDLAAISDLLADRIGHIAMRPDRIANIEHLQALLPDLIPAWGSAPG HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEECCHHHCCHHHHHHHHHHHHHHCCCCCC RHVIVTGADHRILARVPVDTGLGENDRILDLISTAQLLATPGLQGAVTEITLPNGRPAFA CEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHH VSQLIKALPGRVVVIQEKLEPIWGSDAALSITLSATTGFVVLILGFAFHWQSTRAREGDL HHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCH INDAVRGRIDTALNRGRCGLWDWDLSRGRIFWSNSMFAMLGLDNRTDLLTFGEVNALVNS HHHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCEEEEEECCCCCCEEEECCHHHEECC DDIDLFAIADQLVAGELRHIDQSFRMRHTEGHWIWLRVRCELSQGTTDSGLHLIGIAVDV CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEC TEQKSLVEKTVEADLRLRDAIETISEAFVLWDSNNRLVLCNSHFQKLHKLPDSAVTPGTS HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECHHHHHHHCCCCCCCCCCCC YETVIEVGKMPEIRTRLHDNSQQAQGGRTFEAQLDDGSWLHISERRTKDGGYVSVGTDIT HHHHHHHCCCCHHHHHHCCCCHHCCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCHH RIKEHEQKLVDNDLRLRATVIDLQRSQSALERQAIELADLAEKYSQEKTRAEEANQTKSK HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLANMSHELRTPLNAIIGFSEIMGSGMFGSLGSEKYQEYCHDILTSGQYLLEVINDILDM HHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH SKIEAGRMKLDMEPLDLAKTLAESLRVVSGRAQDKSLVLDADIEGNIPVIADRRATKQIM HHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEECCHHHHHHH VNLLSNAVKFTPEGGRVTMRSRVFEDKVVLIIADTGIGIPAQSLARLGRPFEQVESQMTK HHHHHHHHEECCCCCEEEHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHH TYHGSGLGLAIARSLAQLHGGSMRLRSRLEHGTVVRVTLPRDAYKATASISVAA HHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]