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The map label for this gene is 146341732

Identifier: 146341732

GI number: 146341732

Start: 5043500

End: 5043883

Strand: Reverse

Name: 146341732

Synonym: BRADO4837

Alternate gene names: NA

Gene position: 5043883-5043500 (Counterclockwise)

Preceding gene: 146341733

Following gene: 146341730

Centisome position: 67.64

GC content: 63.02

Gene sequence:

>384_bases
ATGTCCACCAAGAAGCTCGATTTCGAGGCGATGTCTTTCGATGACCTCTGGTCGCTCCATGAGCAGATCAGCCAGATCCT
GGCTGAGCGGATCACGTCTGAGAAGCGCGAGCTCGAACGTCGTCTGGCGGTTCTGAATCGCAGCCGCGGCGTAATCGAGG
GGCCGAACAGCGAGGACGCGCCCTCCTATAATGCCAACGGAAAAGCGCGGCGCAAATACCCGCGCGTGCTGCCGAAATAT
CGCAATCCGCAGACGTCCGAGACTTGGTCCGGGCGCGGCAAGCAGCCGCGCTGGCTGGTCGCAGCCATCAAGACGGGGCG
TCGGATCGAAGAGTTCGCCATCAACGGAAGCGGGGCCCCCAAGGGGCGACGTCAGCGGGCCTGA

Upstream 100 bases:

>100_bases
AAATATTCGGGTTTCCCGACAGCGAACCACTTGCGGATCGAAATACCGAATTATATGACATTAATCCGGCAGGATAGAGA
TCACAGATAAAGGTCGCTGC

Downstream 100 bases:

>100_bases
GACCGGCTCGATCACCACAGGCGGCACTCTTCCACCGGTGAGCCGTGCGCTGCTACCGGGTCCGCAGGCACCACGTGCGC
CGGATGCGACTTCTCAATTC

Product: histone-like nucleoid-structuring protein

Products: NA

Alternate protein names: H-NS Histone Family; Histone Family Protein Nucleoid-Structuring Protein H-NS; Histone-Like Nucleoid-Structuring Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSTKKLDFEAMSFDDLWSLHEQISQILAERITSEKRELERRLAVLNRSRGVIEGPNSEDAPSYNANGKARRKYPRVLPKY
RNPQTSETWSGRGKQPRWLVAAIKTGRRIEEFAINGSGAPKGRRQRA

Sequences:

>Translated_127_residues
MSTKKLDFEAMSFDDLWSLHEQISQILAERITSEKRELERRLAVLNRSRGVIEGPNSEDAPSYNANGKARRKYPRVLPKY
RNPQTSETWSGRGKQPRWLVAAIKTGRRIEEFAINGSGAPKGRRQRA
>Mature_126_residues
STKKLDFEAMSFDDLWSLHEQISQILAERITSEKRELERRLAVLNRSRGVIEGPNSEDAPSYNANGKARRKYPRVLPKYR
NPQTSETWSGRGKQPRWLVAAIKTGRRIEEFAINGSGAPKGRRQRA

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14568; Mature: 14436

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKKLDFEAMSFDDLWSLHEQISQILAERITSEKRELERRLAVLNRSRGVIEGPNSEDA
CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
PSYNANGKARRKYPRVLPKYRNPQTSETWSGRGKQPRWLVAAIKTGRRIEEFAINGSGAP
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHEECCCCCC
KGRRQRA
CCCCCCC
>Mature Secondary Structure 
STKKLDFEAMSFDDLWSLHEQISQILAERITSEKRELERRLAVLNRSRGVIEGPNSEDA
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
PSYNANGKARRKYPRVLPKYRNPQTSETWSGRGKQPRWLVAAIKTGRRIEEFAINGSGAP
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHEECCCCCC
KGRRQRA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA