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The map label for this gene is yaiS [C]

Identifier: 146341729

GI number: 146341729

Start: 5039838

End: 5040491

Strand: Reverse

Name: yaiS [C]

Synonym: BRADO4834

Alternate gene names: 146341729

Gene position: 5040491-5039838 (Counterclockwise)

Preceding gene: 146341730

Following gene: 146341727

Centisome position: 67.6

GC content: 64.37

Gene sequence:

>654_bases
ATGAGGGGATTGCAGCTCGCCGGTCGCGGCGACCGTTTGTCGGTGCTTTGTCTCGGCGCGCATTCCGACGACATCGAGAT
CGGCGCGGGCGGCACGCTTCTGACCTGGCTCGACCAGGGCGTTCGCCTGGACGTGCATTGGTGCGTGCTGAGCGGCAATG
GCGAGCGCGGCGTCGAGGCGACCGCATCGGCCAACGATTTTCTCGCCGAGGCAAGCGGCCGCAACCTCGAGATCCTGAAT
TTCCGCGACGGCTTCTTTCCGGAGCAGGGGGAGGAGATCAAGGCCTGGTTCGAGCAGCTCAAGGGCCGCATCAGTCCCGA
CGTCATTCTCGCGCATCGTCGCGACGATGCGCATCAGGACCACCGCCAGGTCAATCGGCTGGTCTGGAACACGTTCCGGG
ATCACCTCGTGCTCGAATATGAGATCCCGAAATGGGACGGCGATCTCGGGCGGCCCAATTTCTACATGCCGGTGTCCGAA
CGCGTGATGAAGCGCAAGGTCGCGCTGCTGATGTCGCATTTCGGCAGCCAGCGCTCCAAGCAGTGGTTCGACCCGGAGAC
GTTCATGGGCCTGGCGCGGCTTCGGGGGATGGAGTGCCGTGCTCCCGAGCGCTACGCCGAAGGCTTTGTGGCCCGCAAGC
TGTCACTGGGCTGA

Upstream 100 bases:

>100_bases
CCATGGATACGCTCCGGGACCGCCAGGTGCTCGAGGAGATGATCGAGCGCGGCGATACGCCCTGGCATCTCGGCGCGAAC
CTTCCCGCCGTGGTGAACGG

Downstream 100 bases:

>100_bases
TCGACGCAGGCCATCGGCGAGGCGCCTTCATCACACAAAGACGGGCGGGAAACGCCGCGATCGATGGTCTGCGACCGAAC
CGGCAGCCGCGGGTCGTCAC

Product: putative deacetylase

Products: NA

Alternate protein names: LmbE-Like Protein; GlcNAc-PI De-N-Acetylase; GlcNAc-PI De-N-Acetylase Family Protein; Deacetylase; N-Acetyl Glucosamine Deacetylase Family Protein; N-Acetylglucosaminylphosphatidylinositol Deacetylase

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MRGLQLAGRGDRLSVLCLGAHSDDIEIGAGGTLLTWLDQGVRLDVHWCVLSGNGERGVEATASANDFLAEASGRNLEILN
FRDGFFPEQGEEIKAWFEQLKGRISPDVILAHRRDDAHQDHRQVNRLVWNTFRDHLVLEYEIPKWDGDLGRPNFYMPVSE
RVMKRKVALLMSHFGSQRSKQWFDPETFMGLARLRGMECRAPERYAEGFVARKLSLG

Sequences:

>Translated_217_residues
MRGLQLAGRGDRLSVLCLGAHSDDIEIGAGGTLLTWLDQGVRLDVHWCVLSGNGERGVEATASANDFLAEASGRNLEILN
FRDGFFPEQGEEIKAWFEQLKGRISPDVILAHRRDDAHQDHRQVNRLVWNTFRDHLVLEYEIPKWDGDLGRPNFYMPVSE
RVMKRKVALLMSHFGSQRSKQWFDPETFMGLARLRGMECRAPERYAEGFVARKLSLG
>Mature_217_residues
MRGLQLAGRGDRLSVLCLGAHSDDIEIGAGGTLLTWLDQGVRLDVHWCVLSGNGERGVEATASANDFLAEASGRNLEILN
FRDGFFPEQGEEIKAWFEQLKGRISPDVILAHRRDDAHQDHRQVNRLVWNTFRDHLVLEYEIPKWDGDLGRPNFYMPVSE
RVMKRKVALLMSHFGSQRSKQWFDPETFMGLARLRGMECRAPERYAEGFVARKLSLG

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24695; Mature: 24695

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLQLAGRGDRLSVLCLGAHSDDIEIGAGGTLLTWLDQGVRLDVHWCVLSGNGERGVEA
CCCCCCCCCCCEEEEEEEECCCCCEEECCCCCEEEECCCCCEEEEEEEEEECCCCCCCEE
TASANDFLAEASGRNLEILNFRDGFFPEQGEEIKAWFEQLKGRISPDVILAHRRDDAHQD
CCCCHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHH
HRQVNRLVWNTFRDHLVLEYEIPKWDGDLGRPNFYMPVSERVMKRKVALLMSHFGSQRSK
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCC
QWFDPETFMGLARLRGMECRAPERYAEGFVARKLSLG
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRGLQLAGRGDRLSVLCLGAHSDDIEIGAGGTLLTWLDQGVRLDVHWCVLSGNGERGVEA
CCCCCCCCCCCEEEEEEEECCCCCEEECCCCCEEEECCCCCEEEEEEEEEECCCCCCCEE
TASANDFLAEASGRNLEILNFRDGFFPEQGEEIKAWFEQLKGRISPDVILAHRRDDAHQD
CCCCHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHH
HRQVNRLVWNTFRDHLVLEYEIPKWDGDLGRPNFYMPVSERVMKRKVALLMSHFGSQRSK
HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCC
QWFDPETFMGLARLRGMECRAPERYAEGFVARKLSLG
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA