| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341724
Identifier: 146341724
GI number: 146341724
Start: 5033849
End: 5035174
Strand: Reverse
Name: 146341724
Synonym: BRADO4829
Alternate gene names: NA
Gene position: 5035174-5033849 (Counterclockwise)
Preceding gene: 146341725
Following gene: 146341723
Centisome position: 67.53
GC content: 64.25
Gene sequence:
>1326_bases ATGCTGGACATGGTGAAATCGCCCGCCGCGGAGCGAACGCCGGCCATCGATCTGCATGCTCTCGTGGCAGAGCTGTTTCC GATCAACCGCAGCCTGACCGGTGCGGGCGTCCGCCGGACGCTCGAGATCGTCGGCCGGCACGTCGACTTGACGATCCATG AGGTCCCGACGGGGACGCCGGTGCTCGACTGGCACGTGCCCGCCGAATGGAACATTCGCGGCGCGACCATCTCGACCTTG TCGGGCCAGCGGCTGGTCGATTTCGCCGACAACAATCTCCACGTGATGGGGTACAGCAAGCCGGTTCAAGGCGTGCTGAG CCGCGCCGAACTCGCAAGGCACGTTCATACGCTGCCGGATCAGCCGGATCTGATTCCGTATCGAACCGGCTACTACGCGG ATGATTGGGGCTTCTGTCTTCCGGACCGTCTCTGGCGGGAGATGACGGACGATCGCTATCAGGTCGAGATCGACAGCGCG ATCACGCAAGGGTCCTTGACCTATGGTGAGTACTTCATCCCCGGGGAGACTGCGAACGAGGTCCTCATCACCTGTCACGT CTGCCATCCGAGCCTCGCCAATGACAATCTGTCCGGCGTCTCCATCATGACGGCGCTGGCGATGCGCCAGATGCGGCGGA CGAGCCGGCTGGGTTATCGCTTCCTGTTTCTTCCCGCGACGATCGGTGCCTTGGCCTGGCTCGATCGCAACGAAAGCCGG CTTGATCGGGTTGAGCACGGACTTGTCCTCACTTGCCTCGGTGATGCCAGCGGCTTCCACTACAAGGGGAGCCGCAAGGG GGGGCCGATCGACCGGGCCGTCGCCCATGTCCTGAAGCACTCAGGCCATCGGCATGAGATCCTGCCGTTCAGTCCGTATG GCTACGATGAGCGGCAGTTCTGCTCGCCCGGCTTCGACCTGCCGGTGGGGTGCCTGATGCGCGGGGTCCATGGCACATTC CCGGAATACCACACCTCCGCGGACAATCTCGATTTCGTCAAGCCGAAACACCTCGACGAGTCCTACGCGGTGATCGAGGA AGTCCTCGATCTGCTCGACCGCGACCGGATCTACGAGCGCGTCGATGGCCGCGGTGAACCGCAGCTCGGCCGCCGCGGCC TCTATAGGGCGATCGCAGGTCAACGTGAGGCGGGCGGGGCCACGCAGATGGATCTCTTGTGGGTGCTCAACCTGGCAGAC GGCAAGCACAGCCTGCTGGACATGGCGATCCGCGCCGATGTGCCGTTCGCGCGGATCGAGGCGGCCGCACGGCTGGCCCT GGATGCCAGCCTGATCAGGCCGACGGAGCAGCGCGCGTCATGTTGA
Upstream 100 bases:
>100_bases GCGAAAGATGCTGCGTGGCCGTTGCTCGCCGAGCGGCCCTTGTGGTGAGCGCGCCGAAGGACCGAAATCGGGTCAGGCCG TCCTTGAAGAGGTGTGCGTC
Downstream 100 bases:
>100_bases TCACGGCACCGCGATGGAGCAGGGCACGATGAGTTCGCAGCCGGACATTCCCCGCATCTTGGTGTTCTCGCTCCGGAACA TCTTCGGCAAGGCCTTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MLDMVKSPAAERTPAIDLHALVAELFPINRSLTGAGVRRTLEIVGRHVDLTIHEVPTGTPVLDWHVPAEWNIRGATISTL SGQRLVDFADNNLHVMGYSKPVQGVLSRAELARHVHTLPDQPDLIPYRTGYYADDWGFCLPDRLWREMTDDRYQVEIDSA ITQGSLTYGEYFIPGETANEVLITCHVCHPSLANDNLSGVSIMTALAMRQMRRTSRLGYRFLFLPATIGALAWLDRNESR LDRVEHGLVLTCLGDASGFHYKGSRKGGPIDRAVAHVLKHSGHRHEILPFSPYGYDERQFCSPGFDLPVGCLMRGVHGTF PEYHTSADNLDFVKPKHLDESYAVIEEVLDLLDRDRIYERVDGRGEPQLGRRGLYRAIAGQREAGGATQMDLLWVLNLAD GKHSLLDMAIRADVPFARIEAAARLALDASLIRPTEQRASC
Sequences:
>Translated_441_residues MLDMVKSPAAERTPAIDLHALVAELFPINRSLTGAGVRRTLEIVGRHVDLTIHEVPTGTPVLDWHVPAEWNIRGATISTL SGQRLVDFADNNLHVMGYSKPVQGVLSRAELARHVHTLPDQPDLIPYRTGYYADDWGFCLPDRLWREMTDDRYQVEIDSA ITQGSLTYGEYFIPGETANEVLITCHVCHPSLANDNLSGVSIMTALAMRQMRRTSRLGYRFLFLPATIGALAWLDRNESR LDRVEHGLVLTCLGDASGFHYKGSRKGGPIDRAVAHVLKHSGHRHEILPFSPYGYDERQFCSPGFDLPVGCLMRGVHGTF PEYHTSADNLDFVKPKHLDESYAVIEEVLDLLDRDRIYERVDGRGEPQLGRRGLYRAIAGQREAGGATQMDLLWVLNLAD GKHSLLDMAIRADVPFARIEAAARLALDASLIRPTEQRASC >Mature_441_residues MLDMVKSPAAERTPAIDLHALVAELFPINRSLTGAGVRRTLEIVGRHVDLTIHEVPTGTPVLDWHVPAEWNIRGATISTL SGQRLVDFADNNLHVMGYSKPVQGVLSRAELARHVHTLPDQPDLIPYRTGYYADDWGFCLPDRLWREMTDDRYQVEIDSA ITQGSLTYGEYFIPGETANEVLITCHVCHPSLANDNLSGVSIMTALAMRQMRRTSRLGYRFLFLPATIGALAWLDRNESR LDRVEHGLVLTCLGDASGFHYKGSRKGGPIDRAVAHVLKHSGHRHEILPFSPYGYDERQFCSPGFDLPVGCLMRGVHGTF PEYHTSADNLDFVKPKHLDESYAVIEEVLDLLDRDRIYERVDGRGEPQLGRRGLYRAIAGQREAGGATQMDLLWVLNLAD GKHSLLDMAIRADVPFARIEAAARLALDASLIRPTEQRASC
Specific function: Unknown
COG id: COG4310
COG function: function code R; Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49208; Mature: 49208
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDMVKSPAAERTPAIDLHALVAELFPINRSLTGAGVRRTLEIVGRHVDLTIHEVPTGTP CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCC VLDWHVPAEWNIRGATISTLSGQRLVDFADNNLHVMGYSKPVQGVLSRAELARHVHTLPD EEEEECCCCCEECCCEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC QPDLIPYRTGYYADDWGFCLPDRLWREMTDDRYQVEIDSAITQGSLTYGEYFIPGETANE CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHCCCCCCCCCEECCCCCCCC VLITCHVCHPSLANDNLSGVSIMTALAMRQMRRTSRLGYRFLFLPATIGALAWLDRNESR EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCHHH LDRVEHGLVLTCLGDASGFHYKGSRKGGPIDRAVAHVLKHSGHRHEILPFSPYGYDERQF HHHHHCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCHHH CSPGFDLPVGCLMRGVHGTFPEYHTSADNLDFVKPKHLDESYAVIEEVLDLLDRDRIYER CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VDGRGEPQLGRRGLYRAIAGQREAGGATQMDLLWVLNLADGKHSLLDMAIRADVPFARIE HCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHH AAARLALDASLIRPTEQRASC HHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MLDMVKSPAAERTPAIDLHALVAELFPINRSLTGAGVRRTLEIVGRHVDLTIHEVPTGTP CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCC VLDWHVPAEWNIRGATISTLSGQRLVDFADNNLHVMGYSKPVQGVLSRAELARHVHTLPD EEEEECCCCCEECCCEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC QPDLIPYRTGYYADDWGFCLPDRLWREMTDDRYQVEIDSAITQGSLTYGEYFIPGETANE CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHCCCCCCCCCEECCCCCCCC VLITCHVCHPSLANDNLSGVSIMTALAMRQMRRTSRLGYRFLFLPATIGALAWLDRNESR EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCHHH LDRVEHGLVLTCLGDASGFHYKGSRKGGPIDRAVAHVLKHSGHRHEILPFSPYGYDERQF HHHHHCCEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCHHH CSPGFDLPVGCLMRGVHGTFPEYHTSADNLDFVKPKHLDESYAVIEEVLDLLDRDRIYER CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VDGRGEPQLGRRGLYRAIAGQREAGGATQMDLLWVLNLADGKHSLLDMAIRADVPFARIE HCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHH AAARLALDASLIRPTEQRASC HHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA