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The map label for this gene is prdB [H]

Identifier: 146341446

GI number: 146341446

Start: 4735857

End: 4736789

Strand: Direct

Name: prdB [H]

Synonym: BRADO4537

Alternate gene names: 146341446

Gene position: 4735857-4736789 (Clockwise)

Preceding gene: 146341437

Following gene: 146341447

Centisome position: 63.51

GC content: 66.99

Gene sequence:

>933_bases
ATGACCGCCTCTTCCGACCCGCTCGGCTTCGCGCCGGATGACACCGCGCCGCTGGCCTACATGGCGCGAACGCGGGACTA
TTATCTCGCGATCGGCTACGACACGCCGTATCGCTGGGCACATTATATTTCGGCGCCATTACAGAAGCTGCGCAAGCCGC
TCGCGCAATCGCGCGTGACACTCATCACTACGGCGGCGCCCTACGATCCCGCCAAGGGCGATCAGGGCCCCGGCGCGCCC
TACAACGGCGGCGCGAAGTTCTACTCGGTCTATGACGGCGACACGTCGGCCACGCACGATCTGCGCATCTCGCACATCGC
CTACGACCGCACGCATACGACGGCTGCGGATTCCAACACCTGGTTTCCGCTACCGCAGTTGCTGCGGCTCGCCAGCGAGG
GCCGCGTCGGCGCGGTCGGGCCGCGCTTCTTCGGTGCGCCGACCAATCGCAGCCAGCGCGTGACGATCGAGCAGGACGCT
CCGGAAATTCTCGCGCGCTGCCGCGCCGACGAGATCGACGCGGTCGTGCTGGTACCGAACTGCCCGGTGTGCCACCAGAC
GGTGAGCCTGGTGGCCCGGCATCTCGAAGCCAATGGCATTTCGACCGTCGTGATGGGCTGCGCCAAGGACATCGTCGAGC
ACGCCGCGGTGCCGCGCTTCCTGTTCTCGGACTTTCCGCTCGGCAACTCCGCCGGCAAGCCGCACGACGCCGCCTCGCAG
GCGTTCACTCTCGAGCTCACGCTCGATGTGCTGGAGAGTTCACCAGCCGGACGGACGACCGTGCAATCGCCGCTGCAATG
GAGCGACGATCACAGCTGGAAGCGCGACTACAGCAACCCCGCTTTGCTCGCCCCCGAGGAGCTCGCGCGCCGGCGCGCCG
AGTTCGACGCCCAGAAGGCGATCGCGCGCGGGATCCGCGAAAGTAAGTCCTGA

Upstream 100 bases:

>100_bases
ACAGACAAAGCCGGAGGCCCCGTTCCGGTTCCAAAGCGCGACGCCTTGACACGGAGCATCGGCCGGCTAGCAATCCGCCA
TCGCTTCAGGAGCGCGACCG

Downstream 100 bases:

>100_bases
AAGCCACACTCGCTTTGAACTCAGCAACAATTCCCTTCGGAAAAAGCTGATACCGCTTGCTCTCCCGTCCCAGTTGAGCT
TGAGTTTCCCCCGAGTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: D-proline reductase 26 kDa subunit [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTASSDPLGFAPDDTAPLAYMARTRDYYLAIGYDTPYRWAHYISAPLQKLRKPLAQSRVTLITTAAPYDPAKGDQGPGAP
YNGGAKFYSVYDGDTSATHDLRISHIAYDRTHTTAADSNTWFPLPQLLRLASEGRVGAVGPRFFGAPTNRSQRVTIEQDA
PEILARCRADEIDAVVLVPNCPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPHDAASQ
AFTLELTLDVLESSPAGRTTVQSPLQWSDDHSWKRDYSNPALLAPEELARRRAEFDAQKAIARGIRESKS

Sequences:

>Translated_310_residues
MTASSDPLGFAPDDTAPLAYMARTRDYYLAIGYDTPYRWAHYISAPLQKLRKPLAQSRVTLITTAAPYDPAKGDQGPGAP
YNGGAKFYSVYDGDTSATHDLRISHIAYDRTHTTAADSNTWFPLPQLLRLASEGRVGAVGPRFFGAPTNRSQRVTIEQDA
PEILARCRADEIDAVVLVPNCPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPHDAASQ
AFTLELTLDVLESSPAGRTTVQSPLQWSDDHSWKRDYSNPALLAPEELARRRAEFDAQKAIARGIRESKS
>Mature_309_residues
TASSDPLGFAPDDTAPLAYMARTRDYYLAIGYDTPYRWAHYISAPLQKLRKPLAQSRVTLITTAAPYDPAKGDQGPGAPY
NGGAKFYSVYDGDTSATHDLRISHIAYDRTHTTAADSNTWFPLPQLLRLASEGRVGAVGPRFFGAPTNRSQRVTIEQDAP
EILARCRADEIDAVVLVPNCPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPHDAASQA
FTLELTLDVLESSPAGRTTVQSPLQWSDDHSWKRDYSNPALLAPEELARRRAEFDAQKAIARGIRESKS

Specific function: D-proline reductase catalyzes the reductive cleavage of a C-N bond in D-proline resulting in the formation of 5- aminovalerate. The alpha subunit has been shown to bind D-proline, presumably via the pyruvoyl group [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022787 [H]

Pfam domain/function: PF07355 GRDB [H]

EC number: =1.21.4.1 [H]

Molecular weight: Translated: 33838; Mature: 33707

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSDPLGFAPDDTAPLAYMARTRDYYLAIGYDTPYRWAHYISAPLQKLRKPLAQSRVT
CCCCCCCCCCCCCCCCCHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEE
LITTAAPYDPAKGDQGPGAPYNGGAKFYSVYDGDTSATHDLRISHIAYDRTHTTAADSNT
EEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCC
WFPLPQLLRLASEGRVGAVGPRFFGAPTNRSQRVTIEQDAPEILARCRADEIDAVVLVPN
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCEEEECCC
CPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPHDAASQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AFTLELTLDVLESSPAGRTTVQSPLQWSDDHSWKRDYSNPALLAPEELARRRAEFDAQKA
EEEEEEEEEHHHCCCCCCCHHCCCCCCCCCCCHHHCCCCCCEECHHHHHHHHHHHHHHHH
IARGIRESKS
HHHHHHHCCC
>Mature Secondary Structure 
TASSDPLGFAPDDTAPLAYMARTRDYYLAIGYDTPYRWAHYISAPLQKLRKPLAQSRVT
CCCCCCCCCCCCCCCCHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEE
LITTAAPYDPAKGDQGPGAPYNGGAKFYSVYDGDTSATHDLRISHIAYDRTHTTAADSNT
EEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCC
WFPLPQLLRLASEGRVGAVGPRFFGAPTNRSQRVTIEQDAPEILARCRADEIDAVVLVPN
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCEEEECCC
CPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPHDAASQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AFTLELTLDVLESSPAGRTTVQSPLQWSDDHSWKRDYSNPALLAPEELARRRAEFDAQKA
EEEEEEEEEHHHCCCCCCCHHCCCCCCCCCCCHHHCCCCCCEECHHHHHHHHHHHHHHHH
IARGIRESKS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10085076 [H]