| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is DprA [H]
Identifier: 146341416
GI number: 146341416
Start: 4705759
End: 4706874
Strand: Direct
Name: DprA [H]
Synonym: BRADO4506
Alternate gene names: 146341416
Gene position: 4705759-4706874 (Clockwise)
Preceding gene: 146341415
Following gene: 146341418
Centisome position: 63.11
GC content: 70.61
Gene sequence:
>1116_bases GTGGACGCCATCAATCCAACCACCGAACTCAGCGCGACCGAGCGGCGCGACCGGCTACGCCTGATCCGCTCGGATCATGT CGGTCCGCGCACCTTCCGGGCCCTGCTCGACCAGTTCGGCACCGCGCGGCGCGCGCTGGATCGCCTGCCGGAGCTGGCCC GTCGTGGCGGCGCGAGCGCCGGCCGGATCTGCTCGATTGACGAAGCCGAAGCCGAGCTCGAGGCCTGCCGCCGGCAAGGC CTGAAGCTGCGGGCGCCGGAAGAGGACGGTTACCCGCCGCGGCTCGCGACCTGTGAGGACGCGCCGCCTTTGCTTGTCAT CCGCGGCGACCGGGACACCCTGACGCGTCCGATGATCGCCATCGTGGGATCACGCAATGCCTCCGCCGCGGGGCTCAAAT TTGCTGGCCTGCTCGCGCATGAGCTCGGACAGGCCGGCTTCATCATCATCTCCGGCCTGGCCCGCGGCATCGATCAGGCC GCGCATCGCGCCAGTGTCGCAAGCGGAACCGTCGCGGTGCTCGCCGGCGGCCACGACCGGATCTATCCGCCCGAGCATGT CGACCTGCTCGGCGCCATCATCGGCAGCCATGGCGCCGCGATCTCGGAGATGCCGCTGGGCCATGAGCCCCGCGCGCGCG ACTTTCCCCGCCGCAACCGGCTGATCTCCGGCGCCTCGCTCGGCGTCGTCGTGGTGGAGGCTGCGCATCGCTCGGGCTCG CTGATCACCGCCCGCATGGCCAGCGAACAGGGCCGCGAGGTGTTCGCCGTGCCGGGATCGCCGCTCGATCCCCGCTCGGC CGGCACCAACGATCTCATCAAGCAGGGCGCGACCCTCGTCACAACCGCCGCGGATATCATCCAGGCCGTCGGACCGATCA TGGAGCGGCCGCTGCCCCTGTCGCTGCGGGAGCCGGACGAGGAGCTGTTCGCCCCCGATCCCGAGAGTCACGACCGCACA CAGATCCTCGGCCTGCTTGGCCCGACGCCTGTGTCCATCGACGACCTGATCCGGATGAGCGGCCTGTCACCGGCCGTGCT GCGCATGGTGCTGCTCGAGCTCGAGCTGGCCGGCCGCTTGGAGCGGCACGGTGGCGGGATGGTGTCGCTGATCTAG
Upstream 100 bases:
>100_bases ATGACGGACGACACGCGCGAAGTGGCCCTGACGTAGCGCACCCTCTTCCCTGCGCCCTCGGGTTGTTCCATGTTGGGCCC TCTGCGAGGGGGGGCTTCGC
Downstream 100 bases:
>100_bases CGCCTGCGCCATCAGCTCAGGCTGCGCTTGCTCCGTAGCCGCAGGTGCTCCTCAGCTTCGAGATTGGCCATGCGCAGGAG ATAGTCGAGCATGTCGAGGT
Product: DNA processing chain A (DprA/Smf)
Products: NA
Alternate protein names: DNA-processing chain A [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASAGRICSIDEAEAELEACRRQG LKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIAIVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQA AHRASVASGTVAVLAGGHDRIYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPLSLREPDEELFAPDPESHDRT QILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRLERHGGGMVSLI
Sequences:
>Translated_371_residues MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASAGRICSIDEAEAELEACRRQG LKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIAIVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQA AHRASVASGTVAVLAGGHDRIYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPLSLREPDEELFAPDPESHDRT QILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRLERHGGGMVSLI >Mature_371_residues MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASAGRICSIDEAEAELEACRRQG LKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIAIVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQA AHRASVASGTVAVLAGGHDRIYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPLSLREPDEELFAPDPESHDRT QILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRLERHGGGMVSLI
Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]
COG id: COG0758
COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smf family [H]
Homologues:
Organism=Escherichia coli, GI48994932, Length=340, Percent_Identity=37.0588235294118, Blast_Score=178, Evalue=5e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003488 [H]
Pfam domain/function: PF02481 DNA_processg_A [H]
EC number: NA
Molecular weight: Translated: 39510; Mature: 39510
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASA CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GRICSIDEAEAELEACRRQGLKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIA CCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCEE IVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQAAHRASVASGTVAVLAGGHDR EEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC IYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS CCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCHHHCEECCCCCCEEEEEECCCCCC LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPL EEEEEHHHHCCCEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC SLREPDEELFAPDPESHDRTQILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRL CCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH ERHGGGMVSLI HHCCCCEEEEC >Mature Secondary Structure MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASA CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GRICSIDEAEAELEACRRQGLKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIA CCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCEE IVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQAAHRASVASGTVAVLAGGHDR EEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC IYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS CCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCHHHCEECCCCCCEEEEEECCCCCC LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPL EEEEEHHHHCCCEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC SLREPDEELFAPDPESHDRTQILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRL CCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH ERHGGGMVSLI HHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7768823; 7542800 [H]