| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146341415
Identifier: 146341415
GI number: 146341415
Start: 4704411
End: 4705694
Strand: Direct
Name: 146341415
Synonym: BRADO4505
Alternate gene names: NA
Gene position: 4704411-4705694 (Clockwise)
Preceding gene: 146341414
Following gene: 146341416
Centisome position: 63.09
GC content: 71.73
Gene sequence:
>1284_bases ATGTCCACACCGGTCCGTTCGAGCGCCAGCGTCCTTCTGTCCGCCGCGCAAATCTGGTCGACGGAGGATCCGTTCGGCTC CGCCAGCACCTCCGCCGAGCCGATCCCGGCCGCGGCGAGCGAGCCTGTGATCGCCGAGGCGCCGATCGCCGTGCGGGCGG ATCTGCTCGTCGAAACCATCACCGCCATCGTCGAGCCGATGATCACGGCAACGACAGCACACGAGCCGAAGCCCGCCGAA ACCCCGGAGCGCTCGCTCGCCGAGACCATCGCCAGCGCCACCCTGCCGCCGCCGCCGCGGACGTGGCCGCCGCGCAAGCT GTCGCTGGCGCTGCAGGGCGGCGGAACCTTCTCCGCCTTCACCTGGGGCGTGCTGGACCGCCTGCTGGAGGAGCCCGCCT GCGATTTCGACACGGTCAGCGGCGCCAGCGCCGGCGCGATCAATGCCGCGCTGCTCGCCAGCGGGCTCGCCCATGGCGGC CGCGACGAGGCGCGCAACCGGCTGGCGCTGTTCTGGACCCGGCTGATGGAAGAGGCCTCGTTCCGCGCGCTGATGGTGAT CGGCGCGTTCTCGCCCGCCAGCAGCGCCGTGTCGTTCGGGTCCGGGCTGCGCGGCGGACGCGCCGACCCGCTCGATCTTG ATCCACTTCGCGACATTCTGGCCGAGACGATCGACTTCGATGCCGTGCACAGCGCAAGCGCGCCGCGCCTCCTGGTCGCC GCGGCCCGGATCCGCGACGGCCATCCGCAGCTGTTCCGCAACGCCGAGATCACGCCGGACGTGCTGCTCGCCTCGAGCTG TCCCGCCCCGCTGCACGCGGCCGTCGACATCGACGGCGAGGCCTATTGGGATGCCGGCCCCGTCGCCAATCCGCCGCTGA TCCAGATCGCGCACGAGTCCAGTGCCGCCGACCTGCTGGTGGTTCAGGTCACGCCGGCCCGCGACGGCTACGTGCCCGTC ACCTCCGCCGCGATCGATCGCCGGCTCGACCAGATCTCGGCCAATGCCGTTCTCAACGCAGAGCTCGCCGCGCTCGAATG GGCCCGCAGCGACGGTCTGCATCCCCCTCGGGTTCATCGTCTGGCCGCCGAGGACGAGATCGACGCGCTCGCGCAGCGGG ACGCCACCGACCTCGGCAGCGACTTCATCGCGACCCTGCATCAGCGCGGCCGCGACGCGGCCGATCGCTGGCTGCGCCAG GCTCCCATGGGCGCGACTTTGACCGTCCCGGACGAGCAGCCAGCCGCCATGACGGACGACACGCGCGAAGTGGCCCTGAC GTAG
Upstream 100 bases:
>100_bases GATTGGCTGTCATGATTCCGGCATCTGATCACGCAACACCAAATTCGAGCGCTTCATCGCCGCGCGCGACGAACGCATTG ATGAGGAGTCGGCGCAGCAC
Downstream 100 bases:
>100_bases CGCACCCTCTTCCCTGCGCCCTCGGGTTGTTCCATGTTGGGCCCTCTGCGAGGGGGGGCTTCGCGTGGACGCCATCAATC CAACCACCGAACTCAGCGCG
Product: putative phospholipase
Products: NA
Alternate protein names: Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Serine Protease; Patatin Family Phospholipase; FabD/Lysophospholipase-Like Esterase; FabD/Lysophospholipase-Like Protein; Patatin-Like Phospholipase; FabD/Lysophospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Esterase; Alpha/Beta Fold Family Hydrolase; Phospholipase
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSTPVRSSASVLLSAAQIWSTEDPFGSASTSAEPIPAAASEPVIAEAPIAVRADLLVETITAIVEPMITATTAHEPKPAE TPERSLAETIASATLPPPPRTWPPRKLSLALQGGGTFSAFTWGVLDRLLEEPACDFDTVSGASAGAINAALLASGLAHGG RDEARNRLALFWTRLMEEASFRALMVIGAFSPASSAVSFGSGLRGGRADPLDLDPLRDILAETIDFDAVHSASAPRLLVA AARIRDGHPQLFRNAEITPDVLLASSCPAPLHAAVDIDGEAYWDAGPVANPPLIQIAHESSAADLLVVQVTPARDGYVPV TSAAIDRRLDQISANAVLNAELAALEWARSDGLHPPRVHRLAAEDEIDALAQRDATDLGSDFIATLHQRGRDAADRWLRQ APMGATLTVPDEQPAAMTDDTREVALT
Sequences:
>Translated_427_residues MSTPVRSSASVLLSAAQIWSTEDPFGSASTSAEPIPAAASEPVIAEAPIAVRADLLVETITAIVEPMITATTAHEPKPAE TPERSLAETIASATLPPPPRTWPPRKLSLALQGGGTFSAFTWGVLDRLLEEPACDFDTVSGASAGAINAALLASGLAHGG RDEARNRLALFWTRLMEEASFRALMVIGAFSPASSAVSFGSGLRGGRADPLDLDPLRDILAETIDFDAVHSASAPRLLVA AARIRDGHPQLFRNAEITPDVLLASSCPAPLHAAVDIDGEAYWDAGPVANPPLIQIAHESSAADLLVVQVTPARDGYVPV TSAAIDRRLDQISANAVLNAELAALEWARSDGLHPPRVHRLAAEDEIDALAQRDATDLGSDFIATLHQRGRDAADRWLRQ APMGATLTVPDEQPAAMTDDTREVALT >Mature_426_residues STPVRSSASVLLSAAQIWSTEDPFGSASTSAEPIPAAASEPVIAEAPIAVRADLLVETITAIVEPMITATTAHEPKPAET PERSLAETIASATLPPPPRTWPPRKLSLALQGGGTFSAFTWGVLDRLLEEPACDFDTVSGASAGAINAALLASGLAHGGR DEARNRLALFWTRLMEEASFRALMVIGAFSPASSAVSFGSGLRGGRADPLDLDPLRDILAETIDFDAVHSASAPRLLVAA ARIRDGHPQLFRNAEITPDVLLASSCPAPLHAAVDIDGEAYWDAGPVANPPLIQIAHESSAADLLVVQVTPARDGYVPVT SAAIDRRLDQISANAVLNAELAALEWARSDGLHPPRVHRLAAEDEIDALAQRDATDLGSDFIATLHQRGRDAADRWLRQA PMGATLTVPDEQPAAMTDDTREVALT
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44949; Mature: 44818
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPVRSSASVLLSAAQIWSTEDPFGSASTSAEPIPAAASEPVIAEAPIAVRADLLVETI CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH TAIVEPMITATTAHEPKPAETPERSLAETIASATLPPPPRTWPPRKLSLALQGGGTFSAF HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHH TWGVLDRLLEEPACDFDTVSGASAGAINAALLASGLAHGGRDEARNRLALFWTRLMEEAS HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC FRALMVIGAFSPASSAVSFGSGLRGGRADPLDLDPLRDILAETIDFDAVHSASAPRLLVA CEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCHHHHH AARIRDGHPQLFRNAEITPDVLLASSCPAPLHAAVDIDGEAYWDAGPVANPPLIQIAHES HHHHCCCCHHHHCCCCCCHHHEEECCCCCCCEEEEECCCCEEECCCCCCCCCEEEEECCC SAADLLVVQVTPARDGYVPVTSAAIDRRLDQISANAVLNAELAALEWARSDGLHPPRVHR CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHCCCCCCHHHH LAAEDEIDALAQRDATDLGSDFIATLHQRGRDAADRWLRQAPMGATLTVPDEQPAAMTDD HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCC TREVALT CCCEECC >Mature Secondary Structure STPVRSSASVLLSAAQIWSTEDPFGSASTSAEPIPAAASEPVIAEAPIAVRADLLVETI CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH TAIVEPMITATTAHEPKPAETPERSLAETIASATLPPPPRTWPPRKLSLALQGGGTFSAF HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHH TWGVLDRLLEEPACDFDTVSGASAGAINAALLASGLAHGGRDEARNRLALFWTRLMEEAS HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC FRALMVIGAFSPASSAVSFGSGLRGGRADPLDLDPLRDILAETIDFDAVHSASAPRLLVA CEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCHHHHH AARIRDGHPQLFRNAEITPDVLLASSCPAPLHAAVDIDGEAYWDAGPVANPPLIQIAHES HHHHCCCCHHHHCCCCCCHHHEEECCCCCCCEEEEECCCCEEECCCCCCCCCEEEEECCC SAADLLVVQVTPARDGYVPVTSAAIDRRLDQISANAVLNAELAALEWARSDGLHPPRVHR CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHCCCCCCHHHH LAAEDEIDALAQRDATDLGSDFIATLHQRGRDAADRWLRQAPMGATLTVPDEQPAAMTDD HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCC TREVALT CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA