| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is mhpC [H]
Identifier: 146341249
GI number: 146341249
Start: 4518881
End: 4519885
Strand: Direct
Name: mhpC [H]
Synonym: BRADO4325
Alternate gene names: 146341249
Gene position: 4518881-4519885 (Clockwise)
Preceding gene: 146341248
Following gene: 146341256
Centisome position: 60.6
GC content: 63.68
Gene sequence:
>1005_bases ATGTCCCGTTTCGCTGTTGCGCTCTGCGCCGCCCTGATCGCTGTCGTCCCCTCCATCGCCTCGGCCGCGGAGGCGGCGCG CGAGCCCTATGGCATCAATCTCGAGGGCTTTGCCTATCCTTATCCGGTCGGCCTGCTGCCGCTGGTCAATGACGGCGAGC AGCTTCGGATGGCCTACATGGATGTCGCGCCGGCGCAGCCCAACGGCCGCACCGCGCTGTTGCTGCACGGCCGGAATTTT CCCGCGAGCTACTGGGCGCCGGTCATCAGGACGCTGACGGAGGCCGGCTTCCGCGTCGTCGTGCCCGACCAGGTCGGTTT TGGCAAATCATCCAAGCCCGCGGGTGAGCTGCATTTCGACACCCTGGCGCGCAACACCATCGCGCTGCTCGATCACCTCG GCATCGCCAGGGTCGAGATCGTCGCGCATTCGATGGGCGGAATGCTCGCGGTGCGAATTGGCCGCGCCTATCCCGATCGT GTCGCGCATCTCGTGCTGACCGCGCCGATCGGGCTCGAGGATTACCGGATGTACGTGCCGCCCATCCCGACCGAAAAGAT CATCGAGACCGAGGATAGTCTCACCGCCGAGGGCTATCGCAAGCAATTGGAGACCAACTACGCGCTGAAGCTGCCGCCCG AGCAGGTGACGCCATTCATCGACGCGCGCTTCAACCTCAAGGGCAGTGCCGACTATCCGCGCTGGCTGAAGAGCTTTGTC GGCTCGTATCAGATGATCTATCGCGAGCCCGTTGTGCACGAGATTCCGCTGCTGACACAGCCGACTTTGTTCATCATGGG AGCCGACGACCACAACGCTCCGGGACGGCCGAACGCGCCTGAAGTGTTGCGCGCCAAGATGGGGCAGAACGCCGAACTCG CGAAAGCACTCAGCAGCCAGATGCGCGATGCGCGCACGGAGGTGATTCCCAACGCCGGCCACCTCGTGTTTCTGGATGCG CCCGAGGCCTACGACGCGCTGCTACTTGAGTTTTTAAGCAAGTAG
Upstream 100 bases:
>100_bases TGTTTATCGCGGCAGCGCGATACAGGCTTGCCTCGGCAGCGAACGCGGGTCACTGCGCGAGGGTCGACGATGCCGTCGCC CTCTGCTTCCCGGAGCCTCA
Downstream 100 bases:
>100_bases CTGTTGGGAACAAACGGCAGGGACGCGGCGGGGCCGCATCCCTGTCCGGCTTCGTGAACTCACCAGTTTCGGAAGCAGCG CTTGCCGTACGGGCCGGTGT
Product: putative alpha/beta hydrolase prolyl aminopeptidase
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSRFAVALCAALIAVVPSIASAAEAAREPYGINLEGFAYPYPVGLLPLVNDGEQLRMAYMDVAPAQPNGRTALLLHGRNF PASYWAPVIRTLTEAGFRVVVPDQVGFGKSSKPAGELHFDTLARNTIALLDHLGIARVEIVAHSMGGMLAVRIGRAYPDR VAHLVLTAPIGLEDYRMYVPPIPTEKIIETEDSLTAEGYRKQLETNYALKLPPEQVTPFIDARFNLKGSADYPRWLKSFV GSYQMIYREPVVHEIPLLTQPTLFIMGADDHNAPGRPNAPEVLRAKMGQNAELAKALSSQMRDARTEVIPNAGHLVFLDA PEAYDALLLEFLSK
Sequences:
>Translated_334_residues MSRFAVALCAALIAVVPSIASAAEAAREPYGINLEGFAYPYPVGLLPLVNDGEQLRMAYMDVAPAQPNGRTALLLHGRNF PASYWAPVIRTLTEAGFRVVVPDQVGFGKSSKPAGELHFDTLARNTIALLDHLGIARVEIVAHSMGGMLAVRIGRAYPDR VAHLVLTAPIGLEDYRMYVPPIPTEKIIETEDSLTAEGYRKQLETNYALKLPPEQVTPFIDARFNLKGSADYPRWLKSFV GSYQMIYREPVVHEIPLLTQPTLFIMGADDHNAPGRPNAPEVLRAKMGQNAELAKALSSQMRDARTEVIPNAGHLVFLDA PEAYDALLLEFLSK >Mature_333_residues SRFAVALCAALIAVVPSIASAAEAAREPYGINLEGFAYPYPVGLLPLVNDGEQLRMAYMDVAPAQPNGRTALLLHGRNFP ASYWAPVIRTLTEAGFRVVVPDQVGFGKSSKPAGELHFDTLARNTIALLDHLGIARVEIVAHSMGGMLAVRIGRAYPDRV AHLVLTAPIGLEDYRMYVPPIPTEKIIETEDSLTAEGYRKQLETNYALKLPPEQVTPFIDARFNLKGSADYPRWLKSFVG SYQMIYREPVVHEIPLLTQPTLFIMGADDHNAPGRPNAPEVLRAKMGQNAELAKALSSQMRDARTEVIPNAGHLVFLDAP EAYDALLLEFLSK
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mhpC alpha/beta hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=299, Percent_Identity=25.752508361204, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 36630; Mature: 36499
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFAVALCAALIAVVPSIASAAEAAREPYGINLEGFAYPYPVGLLPLVNDGEQLRMAYM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHEEHHH DVAPAQPNGRTALLLHGRNFPASYWAPVIRTLTEAGFRVVVPDQVGFGKSSKPAGELHFD CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHH TLARNTIALLDHLGIARVEIVAHSMGGMLAVRIGRAYPDRVAHLVLTAPIGLEDYRMYVP HHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCHHHHEEEEEECCCCCCCCEEECC PIPTEKIIETEDSLTAEGYRKQLETNYALKLPPEQVTPFIDARFNLKGSADYPRWLKSFV CCCHHHHHCCCCCHHHHHHHHHHCCCCEEECCHHHHCCHHCEEEECCCCCCHHHHHHHHH GSYQMIYREPVVHEIPLLTQPTLFIMGADDHNAPGRPNAPEVLRAKMGQNAELAKALSSQ HHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHH MRDARTEVIPNAGHLVFLDAPEAYDALLLEFLSK HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCC >Mature Secondary Structure SRFAVALCAALIAVVPSIASAAEAAREPYGINLEGFAYPYPVGLLPLVNDGEQLRMAYM CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHEEHHH DVAPAQPNGRTALLLHGRNFPASYWAPVIRTLTEAGFRVVVPDQVGFGKSSKPAGELHFD CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHH TLARNTIALLDHLGIARVEIVAHSMGGMLAVRIGRAYPDRVAHLVLTAPIGLEDYRMYVP HHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCHHHHEEEEEECCCCCCCCEEECC PIPTEKIIETEDSLTAEGYRKQLETNYALKLPPEQVTPFIDARFNLKGSADYPRWLKSFV CCCHHHHHCCCCCHHHHHHHHHHCCCCEEECCHHHHCCHHCEEEECCCCCCHHHHHHHHH GSYQMIYREPVVHEIPLLTQPTLFIMGADDHNAPGRPNAPEVLRAKMGQNAELAKALSSQ HHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHH MRDARTEVIPNAGHLVFLDAPEAYDALLLEFLSK HHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA