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The map label for this gene is ydfF [H]

Identifier: 146341248

GI number: 146341248

Start: 4518069

End: 4518770

Strand: Direct

Name: ydfF [H]

Synonym: BRADO4324

Alternate gene names: 146341248

Gene position: 4518069-4518770 (Clockwise)

Preceding gene: 146341245

Following gene: 146341249

Centisome position: 60.59

GC content: 70.37

Gene sequence:

>702_bases
ATGAAATCGGGTCCAGACATCGCGATGGTGGCCGCGCTGGTCGGCGACCCCGCCCGTGCCAACATGCTGACCGCCCTGCT
CTCGGGCCGCGCGCTGACCGCGACCGAGCTCGCCCAGGAGGCGGGCGTGACACCGCAGACCGCGAGCTCGCATCTCGCCA
AGCTCGAAGGCGGCGGCCTGATCGAACCTGAGAAGCAGGGCCGCCACCGCTACTACCGTCTGGCCGATCCCGACGTCGCC
GACGTGCTGGAGAAGCTCGCCGGGCTCGCGGCGCGCGCCGGCCACATGCGGGTGCGCACCGGGCCGAAGGAGCCGGAGCT
GCGGCGCGCCCGCATCTGCTACGATCATCTCGCAGGCGACCTCGGCGTCCAGATGCTCGACAGCATGACGCGACAAAGGC
TGGTGCGCCGGCGCAAGCAGGAGATCGTGCTGACCGAGGATGGCGAGCAGTTCCTGGCGCGACATCTGCGGATCTCGCCG
GAGATGCTGGCGCATCCGCGCCGTCCGGTGTGCAAGGCCTGTCTCGACTGGAGCGCGCGGCGGCACCATCTCGCCGGCAC
CTTGGGCGCGGCCTTGATGAAGCGCTTCACCGAGTTGAAATGGGCCGCGCGCGACACGACGCCCGGCAGCCGTGTCGTGA
ATTTCAGCCGCGCCGGCGAGAAGCACTTCGCGGCGCTGTTCGGACCGGATGGCGGCGGCTGA

Upstream 100 bases:

>100_bases
AGCGAATGAAGACGGTGATGGTCATGACAACCTCTGGCATGTTTGACATCATCGACACTATCCGCTTGCCCGGCGACAAT
GCTTCGGCTAACATCGAACT

Downstream 100 bases:

>100_bases
GATCACACGCTGTTTATCGCGGCAGCGCGATACAGGCTTGCCTCGGCAGCGAACGCGGGTCACTGCGCGAGGGTCGACGA
TGCCGTCGCCCTCTGCTTCC

Product: Ars family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKSGPDIAMVAALVGDPARANMLTALLSGRALTATELAQEAGVTPQTASSHLAKLEGGGLIEPEKQGRHRYYRLADPDVA
DVLEKLAGLAARAGHMRVRTGPKEPELRRARICYDHLAGDLGVQMLDSMTRQRLVRRRKQEIVLTEDGEQFLARHLRISP
EMLAHPRRPVCKACLDWSARRHHLAGTLGAALMKRFTELKWAARDTTPGSRVVNFSRAGEKHFAALFGPDGGG

Sequences:

>Translated_233_residues
MKSGPDIAMVAALVGDPARANMLTALLSGRALTATELAQEAGVTPQTASSHLAKLEGGGLIEPEKQGRHRYYRLADPDVA
DVLEKLAGLAARAGHMRVRTGPKEPELRRARICYDHLAGDLGVQMLDSMTRQRLVRRRKQEIVLTEDGEQFLARHLRISP
EMLAHPRRPVCKACLDWSARRHHLAGTLGAALMKRFTELKWAARDTTPGSRVVNFSRAGEKHFAALFGPDGGG
>Mature_233_residues
MKSGPDIAMVAALVGDPARANMLTALLSGRALTATELAQEAGVTPQTASSHLAKLEGGGLIEPEKQGRHRYYRLADPDVA
DVLEKLAGLAARAGHMRVRTGPKEPELRRARICYDHLAGDLGVQMLDSMTRQRLVRRRKQEIVLTEDGEQFLARHLRISP
EMLAHPRRPVCKACLDWSARRHHLAGTLGAALMKRFTELKWAARDTTPGSRVVNFSRAGEKHFAALFGPDGGG

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 25482; Mature: 25482

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSGPDIAMVAALVGDPARANMLTALLSGRALTATELAQEAGVTPQTASSHLAKLEGGGL
CCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
IEPEKQGRHRYYRLADPDVADVLEKLAGLAARAGHMRVRTGPKEPELRRARICYDHLAGD
CCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHH
LGVQMLDSMTRQRLVRRRKQEIVLTEDGEQFLARHLRISPEMLAHPRRPVCKACLDWSAR
HHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH
RHHLAGTLGAALMKRFTELKWAARDTTPGSRVVNFSRAGEKHFAALFGPDGGG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHCCCHHEEEEECCCCCC
>Mature Secondary Structure
MKSGPDIAMVAALVGDPARANMLTALLSGRALTATELAQEAGVTPQTASSHLAKLEGGGL
CCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
IEPEKQGRHRYYRLADPDVADVLEKLAGLAARAGHMRVRTGPKEPELRRARICYDHLAGD
CCCCHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHH
LGVQMLDSMTRQRLVRRRKQEIVLTEDGEQFLARHLRISPEMLAHPRRPVCKACLDWSAR
HHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH
RHHLAGTLGAALMKRFTELKWAARDTTPGSRVVNFSRAGEKHFAALFGPDGGG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHCCCHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]