Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is cdsA [H]
Identifier: 146341064
GI number: 146341064
Start: 4331845
End: 4332702
Strand: Reverse
Name: cdsA [H]
Synonym: BRADO4135
Alternate gene names: 146341064
Gene position: 4332702-4331845 (Counterclockwise)
Preceding gene: 146341065
Following gene: 146341063
Centisome position: 58.11
GC content: 71.21
Gene sequence:
>858_bases GTGAGCAAACCGGACACCGCAGCCGTGGCGGACGCGCAGCCGAAAAAGGCGGCGCCGAGCAATCTTCTGCTGCGCATCGC GGCGGCGCTCGTGCTGGTGCCCCTGGCGCTGGGGGTGGCCTATGCCGGCGGCGTGTTCTGGACCACGCTGGTCACCGTTG TCGCCGTCGGCCTCTATCTCGAATGGCTGATGGTCGTGGGCGAGGTCCGTGCCGTCGGCGTCAGTGTCGCGGGCGCCGTG GCCATCGCGCTATCCGGCGTCTGTCTCGCCTTCGGCCTGGTCGATTTCGCCGTGGGCGTGCTCGGTCTCGGTCTTGCGCT CGTCACCGCGCTCGCGGCCGGCCATCGCAGCTGGGCCGCCAGCGGCTTCATCTACGCCGCGGCGGCCGAGCTCGCCTCGG TGATCGTGCGGCTCGATGCGTCGCAGGGATGGTACGCCCTGGTGCTGGTCTTCCTGGTGGTGTGGTCGAGCGACATCGGC GGCTATGTGGCGGGGCGCGGCATCGGCGGGCCGAAGCTCGCGCCGCGGATCAGCCCGAACAAGACCTGGGCCGGCGCGAT CGGCGGCTTCGCGGCGAGCCTCGTCGCGGCCGCCTGCTGGTCGCTGGCCGGCGCCGGCGGCGTGGCGAGCATGGTGGCGC TGGCGGCGGTGCTGTCGGTTGTGTCGCAGCTCGGCGACCTCGCGGAGTCCGCGGTCAAGCGGCACTTCGGCGTCAAGGAT TCAAGTCACATCATCCCGGGGCATGGCGGCCTATTGGACCGCCTGGATGGCTACGTCGCCGCGATCGTGTTCGCGGCTGT GGTGGGTTTGCTCCGCGGCGGCCTCGACGGCGTCGGCCGCGGTCTTCTGGTTTGGTGA
Upstream 100 bases:
>100_bases AGCATTGGCCTGACTTCGACAAGGCGGCGCTGGAAGGCGCGATCGCCGAGTTCGGCCGGCGTGAACGCCGCTTCGGCGGC CTCGTGGCGAAAACCGCCTC
Downstream 100 bases:
>100_bases CCGGTGCCTTGGCGACCGGTCGAGATTGTTTGGTGAGAACATGAGCGCAGTGCCATTGCGAAACAACAAGGCGATCGCGG CTGATGTGCGCAGCATCACC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSKPDTAAVADAQPKKAAPSNLLLRIAAALVLVPLALGVAYAGGVFWTTLVTVVAVGLYLEWLMVVGEVRAVGVSVAGAV AIALSGVCLAFGLVDFAVGVLGLGLALVTALAAGHRSWAASGFIYAAAAELASVIVRLDASQGWYALVLVFLVVWSSDIG GYVAGRGIGGPKLAPRISPNKTWAGAIGGFAASLVAAACWSLAGAGGVASMVALAAVLSVVSQLGDLAESAVKRHFGVKD SSHIIPGHGGLLDRLDGYVAAIVFAAVVGLLRGGLDGVGRGLLVW
Sequences:
>Translated_285_residues MSKPDTAAVADAQPKKAAPSNLLLRIAAALVLVPLALGVAYAGGVFWTTLVTVVAVGLYLEWLMVVGEVRAVGVSVAGAV AIALSGVCLAFGLVDFAVGVLGLGLALVTALAAGHRSWAASGFIYAAAAELASVIVRLDASQGWYALVLVFLVVWSSDIG GYVAGRGIGGPKLAPRISPNKTWAGAIGGFAASLVAAACWSLAGAGGVASMVALAAVLSVVSQLGDLAESAVKRHFGVKD SSHIIPGHGGLLDRLDGYVAAIVFAAVVGLLRGGLDGVGRGLLVW >Mature_284_residues SKPDTAAVADAQPKKAAPSNLLLRIAAALVLVPLALGVAYAGGVFWTTLVTVVAVGLYLEWLMVVGEVRAVGVSVAGAVA IALSGVCLAFGLVDFAVGVLGLGLALVTALAAGHRSWAASGFIYAAAAELASVIVRLDASQGWYALVLVFLVVWSSDIGG YVAGRGIGGPKLAPRISPNKTWAGAIGGFAASLVAAACWSLAGAGGVASMVALAAVLSVVSQLGDLAESAVKRHFGVKDS SHIIPGHGGLLDRLDGYVAAIVFAAVVGLLRGGLDGVGRGLLVW
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=127, Percent_Identity=44.8818897637795, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787677, Length=119, Percent_Identity=36.9747899159664, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28475; Mature: 28344
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPDTAAVADAQPKKAAPSNLLLRIAAALVLVPLALGVAYAGGVFWTTLVTVVAVGLYL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWLMVVGEVRAVGVSVAGAVAIALSGVCLAFGLVDFAVGVLGLGLALVTALAAGHRSWAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SGFIYAAAAELASVIVRLDASQGWYALVLVFLVVWSSDIGGYVAGRGIGGPKLAPRISPN HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCC KTWAGAIGGFAASLVAAACWSLAGAGGVASMVALAAVLSVVSQLGDLAESAVKRHFGVKD CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSHIIPGHGGLLDRLDGYVAAIVFAAVVGLLRGGLDGVGRGLLVW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC >Mature Secondary Structure SKPDTAAVADAQPKKAAPSNLLLRIAAALVLVPLALGVAYAGGVFWTTLVTVVAVGLYL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWLMVVGEVRAVGVSVAGAVAIALSGVCLAFGLVDFAVGVLGLGLALVTALAAGHRSWAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SGFIYAAAAELASVIVRLDASQGWYALVLVFLVVWSSDIGGYVAGRGIGGPKLAPRISPN HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCC KTWAGAIGGFAASLVAAACWSLAGAGGVASMVALAAVLSVVSQLGDLAESAVKRHFGVKD CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSHIIPGHGGLLDRLDGYVAAIVFAAVVGLLRGGLDGVGRGLLVW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA