Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is ureE [H]
Identifier: 146340998
GI number: 146340998
Start: 4258184
End: 4258633
Strand: Reverse
Name: ureE [H]
Synonym: BRADO4069
Alternate gene names: 146340998
Gene position: 4258633-4258184 (Counterclockwise)
Preceding gene: 146340999
Following gene: 146340997
Centisome position: 57.11
GC content: 68.22
Gene sequence:
>450_bases ATGCTTCGTCTGCACGGCATCCTGGGACGCGCCGACGATAAGGTCTACGCGCGGCAACTGCACGCGCTGGAGCATCGCGG CGGTATCGAGCTGTTGTTCGTGCCGCCGGCCGATGCCGGCCGTAAGCGTTTCCGCCTGACCACCGATCGCGGCACCGACT GTGCCGTCAGCCTCGATCGCGACGAGGAACTGGTCGACGGCGCGCTGCTGCATCTCGACGCGGAGCGCGCGATCATCGCC CGTTTCGGCGAGCAGCAGGTGCTGCGCCTCAAGCCGCGCGACGACGCGAGCGCGCTGAAGCTCGGCTGGCACGCCGGCAA TCTGCACTGGCGCGTCCGCTTCGAAGTCGATGTCCTCGTAGTGCTGCTTGACGCGCCGCTCGCGACCTATCGCGCGCGGA TCCAGCCGCTGCTCGACTCCGGCGAGGTGGCGGAGGACGCGAATGTTTGA
Upstream 100 bases:
>100_bases TCTCAACCCTCATGGTGAGGAGCCCGCCACTTGGCGGGCGTCTCGAACCATGAGGCCCAATTCGAACGACGAGCGCTGAA CGACGAGAGGAACCACGCCG
Downstream 100 bases:
>100_bases CCGCGGCGAGGCGCTGGCATTGCTGCAACTCGGCGACAGTGCCTTTCCCGCCGGCGGGTTTGCGTTTTCCTGGGGTATCG AGGGTCTTGCCGCCGATGGC
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MLRLHGILGRADDKVYARQLHALEHRGGIELLFVPPADAGRKRFRLTTDRGTDCAVSLDRDEELVDGALLHLDAERAIIA RFGEQQVLRLKPRDDASALKLGWHAGNLHWRVRFEVDVLVVLLDAPLATYRARIQPLLDSGEVAEDANV
Sequences:
>Translated_149_residues MLRLHGILGRADDKVYARQLHALEHRGGIELLFVPPADAGRKRFRLTTDRGTDCAVSLDRDEELVDGALLHLDAERAIIA RFGEQQVLRLKPRDDASALKLGWHAGNLHWRVRFEVDVLVVLLDAPLATYRARIQPLLDSGEVAEDANV >Mature_149_residues MLRLHGILGRADDKVYARQLHALEHRGGIELLFVPPADAGRKRFRLTTDRGTDCAVSLDRDEELVDGALLHLDAERAIIA RFGEQQVLRLKPRDDASALKLGWHAGNLHWRVRFEVDVLVVLLDAPLATYRARIQPLLDSGEVAEDANV
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR004029 [H]
Pfam domain/function: PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 16689; Mature: 16689
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLHGILGRADDKVYARQLHALEHRGGIELLFVPPADAGRKRFRLTTDRGTDCAVSLDR CEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECC DEELVDGALLHLDAERAIIARFGEQQVLRLKPRDDASALKLGWHAGNLHWRVRFEVDVLV CCHHHCCEEEEECCCHHEEECCCCCEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEEEE VLLDAPLATYRARIQPLLDSGEVAEDANV EEECCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLRLHGILGRADDKVYARQLHALEHRGGIELLFVPPADAGRKRFRLTTDRGTDCAVSLDR CEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECC DEELVDGALLHLDAERAIIARFGEQQVLRLKPRDDASALKLGWHAGNLHWRVRFEVDVLV CCHHHCCEEEEECCCHHEEECCCCCEEEEECCCCCCCEEEEEEEECCEEEEEEEEEEEEE VLLDAPLATYRARIQPLLDSGEVAEDANV EEECCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]