Click here to switch to the map view.

The map label for this gene is ureF [H]

Identifier: 146340997

GI number: 146340997

Start: 4257514

End: 4258191

Strand: Reverse

Name: ureF [H]

Synonym: BRADO4068

Alternate gene names: 146340997

Gene position: 4258191-4257514 (Counterclockwise)

Preceding gene: 146340998

Following gene: 146340996

Centisome position: 57.11

GC content: 69.76

Gene sequence:

>678_bases
ATGTTTGACCGCGGCGAGGCGCTGGCATTGCTGCAACTCGGCGACAGTGCCTTTCCCGCCGGCGGGTTTGCGTTTTCCTG
GGGTATCGAGGGTCTTGCCGCCGATGGCCTGCTGTCCGATCGCAGCGATCTCGACGGTGTCGTCGCCGATCACCTCGCGC
AACGCTGGGCCAGCATGGACCGCATTCTGCTGCGTCGCGCCTGGCAGGCGAGCGACAGCTCAGCGATCGCCGCTGTCGAT
CGCCTCGCGGAGGCCACTACGCCGTCGGCGGAGATGCGCGAAGGCTCGCGGCGTGCGGGCAGGGCTCTGCTCGGTGTCTG
GGTCAAGCTCGCAGGTCCCTTGTCCACATCGTACCGCGCCCGCGTCTCGGCCGATCCGAGGCTTGGGCACCTCGCCGTCG
TGCAAGCCATCACCGGCCGCGACGCCGGCCTCAGCCTCGACGCGGCCGAGCTCGTCTCGGGCTGGACGCTGATCGCCGGC
CTCGTCAGCGCCGCCGTGCGGCTCGGTCTGATCGGCCACATCGACTCGCAGCAAAGTCTCGCGCGCGCCCGCGCTCTGCT
GGCCGAACTGCTCGACGAGACGCCCGACGACGGCGCCTTACCGTCGAGCTTCACGCCCTTCATCGACATCGCCGTGTCGC
GCGGGCCGCTGCGGCACGTGCGCATGTTCACGACCTGA

Upstream 100 bases:

>100_bases
GAAGTCGATGTCCTCGTAGTGCTGCTTGACGCGCCGCTCGCGACCTATCGCGCGCGGATCCAGCCGCTGCTCGACTCCGG
CGAGGTGGCGGAGGACGCGA

Downstream 100 bases:

>100_bases
GGTGCCCTGCCATGATGAACCTGTCACCGACGGAGCTCGATCGTCTCGTCATCTTCAACGCCGCGCAGATGGCGCGGCGC
AATCGCTCGCTCGGCATCAA

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MFDRGEALALLQLGDSAFPAGGFAFSWGIEGLAADGLLSDRSDLDGVVADHLAQRWASMDRILLRRAWQASDSSAIAAVD
RLAEATTPSAEMREGSRRAGRALLGVWVKLAGPLSTSYRARVSADPRLGHLAVVQAITGRDAGLSLDAAELVSGWTLIAG
LVSAAVRLGLIGHIDSQQSLARARALLAELLDETPDDGALPSSFTPFIDIAVSRGPLRHVRMFTT

Sequences:

>Translated_225_residues
MFDRGEALALLQLGDSAFPAGGFAFSWGIEGLAADGLLSDRSDLDGVVADHLAQRWASMDRILLRRAWQASDSSAIAAVD
RLAEATTPSAEMREGSRRAGRALLGVWVKLAGPLSTSYRARVSADPRLGHLAVVQAITGRDAGLSLDAAELVSGWTLIAG
LVSAAVRLGLIGHIDSQQSLARARALLAELLDETPDDGALPSSFTPFIDIAVSRGPLRHVRMFTT
>Mature_225_residues
MFDRGEALALLQLGDSAFPAGGFAFSWGIEGLAADGLLSDRSDLDGVVADHLAQRWASMDRILLRRAWQASDSSAIAAVD
RLAEATTPSAEMREGSRRAGRALLGVWVKLAGPLSTSYRARVSADPRLGHLAVVQAITGRDAGLSLDAAELVSGWTLIAG
LVSAAVRLGLIGHIDSQQSLARARALLAELLDETPDDGALPSSFTPFIDIAVSRGPLRHVRMFTT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 23769; Mature: 23769

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRGEALALLQLGDSAFPAGGFAFSWGIEGLAADGLLSDRSDLDGVVADHLAQRWASMD
CCCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RILLRRAWQASDSSAIAAVDRLAEATTPSAEMREGSRRAGRALLGVWVKLAGPLSTSYRA
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
RVSADPRLGHLAVVQAITGRDAGLSLDAAELVSGWTLIAGLVSAAVRLGLIGHIDSQQSL
EECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ARARALLAELLDETPDDGALPSSFTPFIDIAVSRGPLRHVRMFTT
HHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCCHHHEEEECC
>Mature Secondary Structure
MFDRGEALALLQLGDSAFPAGGFAFSWGIEGLAADGLLSDRSDLDGVVADHLAQRWASMD
CCCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
RILLRRAWQASDSSAIAAVDRLAEATTPSAEMREGSRRAGRALLGVWVKLAGPLSTSYRA
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
RVSADPRLGHLAVVQAITGRDAGLSLDAAELVSGWTLIAGLVSAAVRLGLIGHIDSQQSL
EECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ARARALLAELLDETPDDGALPSSFTPFIDIAVSRGPLRHVRMFTT
HHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]