Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340967
Identifier: 146340967
GI number: 146340967
Start: 4226557
End: 4227477
Strand: Direct
Name: 146340967
Synonym: BRADO4038
Alternate gene names: NA
Gene position: 4226557-4227477 (Clockwise)
Preceding gene: 146340960
Following gene: 146340970
Centisome position: 56.68
GC content: 67.21
Gene sequence:
>921_bases GTGCACAAGCCGCCGAAGGTCGCGGCAAAACGTCCCGCCAGAGTCCCGGCCGACGATGCCCCCGAGCGGATCGCCCGCGC GCTGGAGGCGATCGCGGCGCATCTTGCCGCAACTTCGCCGCGCACCACGCCCGCTCTCGATCTGAACGCGGCCGATGCGT TCGTCTGGCATCCGGACGGCCGGCTGTCGACGGTGCCGCGCGTCAGCCGCGTCGAGATCGATCTGCTCAAGGGCATCGAC CGGATGCGCGACATCCTGATCGAGAACACCGAGCGGTTCGCCAACGGCCTTCCCGCCAACAATGCGCTGCTGTGGGGCGC GCGCGGCATGGGCAAGTCGTCGCTGGTGAAGGCGGCGCACGCGACGATCAATCTCGCGCGCAAGCCGGCCGACCGGCTCA AGCTGATCGAGATCCACCGCGAGGATATCGAGAGCCTGCCGGCGCTGATGGACATCCTGCGCGCCGCTCCCTTCCACTTC ATCGTGTTCTGCGACGACCTGTCCTTCGATGGCAATGACGCGTCCTACAAATCGCTCAAGGCCGTGCTCGAAGGCGGCAT AGAGGGCCGGCCCGAGAACGTCATTCTCTACGCCACCTCGAACCGCCGCCATCTGCTCGCCCGCGACATGATCGAGAACG AGCGCTCCACCGCGATCAATCCGGGCGAAGCCGTCGAGGAGAAGGTGTCGCTGTCGGACCGCTTCGGCCTGTGGCTCGGC TTCCACCGCTGCAGCCAGGACGAATATCTCGCGATGGTCCGCGGCTATTGCAGCCATTTCGGCATTGCTGCCGACGACGA CGAATTGGAGCGCGACGCGCTGGAATGGGCCACGACGCGCGGCTCGCGCTCCGGCCGTGTCGCTTGGCAGTTCACGCAGG ACCTGGCCGGCCGCCTCGGCGTGCGGCTGAGCGCGAAGTAA
Upstream 100 bases:
>100_bases TTCAGGAACTTGCAGCATGTCGAAAAAACCAGCCAAAGCCCCCGCCCGCACCTCCGTCAAAACCGTGTTCAGACCGATCG CCAAAGGTCCCACAACCGCG
Downstream 100 bases:
>100_bases GGCACTCGGCCGTCATCCCGACAATGGCGGCCAAAATCACATCGAATACGACGCAAGCAGCCTCTGCACAAAAAGCGTCA TGCCCCGCGCAGGCGGGGCA
Product: putative ATPase family protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; Intermediate Filament Protein; AAA+ Superfamily ATPase; AAA ATPase Superfamily
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MHKPPKVAAKRPARVPADDAPERIARALEAIAAHLAATSPRTTPALDLNAADAFVWHPDGRLSTVPRVSRVEIDLLKGID RMRDILIENTERFANGLPANNALLWGARGMGKSSLVKAAHATINLARKPADRLKLIEIHREDIESLPALMDILRAAPFHF IVFCDDLSFDGNDASYKSLKAVLEGGIEGRPENVILYATSNRRHLLARDMIENERSTAINPGEAVEEKVSLSDRFGLWLG FHRCSQDEYLAMVRGYCSHFGIAADDDELERDALEWATTRGSRSGRVAWQFTQDLAGRLGVRLSAK
Sequences:
>Translated_306_residues MHKPPKVAAKRPARVPADDAPERIARALEAIAAHLAATSPRTTPALDLNAADAFVWHPDGRLSTVPRVSRVEIDLLKGID RMRDILIENTERFANGLPANNALLWGARGMGKSSLVKAAHATINLARKPADRLKLIEIHREDIESLPALMDILRAAPFHF IVFCDDLSFDGNDASYKSLKAVLEGGIEGRPENVILYATSNRRHLLARDMIENERSTAINPGEAVEEKVSLSDRFGLWLG FHRCSQDEYLAMVRGYCSHFGIAADDDELERDALEWATTRGSRSGRVAWQFTQDLAGRLGVRLSAK >Mature_306_residues MHKPPKVAAKRPARVPADDAPERIARALEAIAAHLAATSPRTTPALDLNAADAFVWHPDGRLSTVPRVSRVEIDLLKGID RMRDILIENTERFANGLPANNALLWGARGMGKSSLVKAAHATINLARKPADRLKLIEIHREDIESLPALMDILRAAPFHF IVFCDDLSFDGNDASYKSLKAVLEGGIEGRPENVILYATSNRRHLLARDMIENERSTAINPGEAVEEKVSLSDRFGLWLG FHRCSQDEYLAMVRGYCSHFGIAADDDELERDALEWATTRGSRSGRVAWQFTQDLAGRLGVRLSAK
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33848; Mature: 33848
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKPPKVAAKRPARVPADDAPERIARALEAIAAHLAATSPRTTPALDLNAADAFVWHPDG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCC RLSTVPRVSRVEIDLLKGIDRMRDILIENTERFANGLPANNALLWGARGMGKSSLVKAAH CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHH ATINLARKPADRLKLIEIHREDIESLPALMDILRAAPFHFIVFCDDLSFDGNDASYKSLK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHH AVLEGGIEGRPENVILYATSNRRHLLARDMIENERSTAINPGEAVEEKVSLSDRFGLWLG HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH FHRCSQDEYLAMVRGYCSHFGIAADDDELERDALEWATTRGSRSGRVAWQFTQDLAGRLG HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHC VRLSAK CEEECC >Mature Secondary Structure MHKPPKVAAKRPARVPADDAPERIARALEAIAAHLAATSPRTTPALDLNAADAFVWHPDG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCC RLSTVPRVSRVEIDLLKGIDRMRDILIENTERFANGLPANNALLWGARGMGKSSLVKAAH CCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEECCCCCCHHHHHHHHH ATINLARKPADRLKLIEIHREDIESLPALMDILRAAPFHFIVFCDDLSFDGNDASYKSLK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHH AVLEGGIEGRPENVILYATSNRRHLLARDMIENERSTAINPGEAVEEKVSLSDRFGLWLG HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH FHRCSQDEYLAMVRGYCSHFGIAADDDELERDALEWATTRGSRSGRVAWQFTQDLAGRLG HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHC VRLSAK CEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA