Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146340937
Identifier: 146340937
GI number: 146340937
Start: 4199499
End: 4200689
Strand: Reverse
Name: 146340937
Synonym: BRADO4008
Alternate gene names: NA
Gene position: 4200689-4199499 (Counterclockwise)
Preceding gene: 146340938
Following gene: 146340931
Centisome position: 56.34
GC content: 65.16
Gene sequence:
>1191_bases TTGTCCATCCCGCAGGGGGAGGCGACCATGGCGGATCCGGCCGGCATTGCGTGGCAGCTGTCTGATTTGTGGTATTTTGG TGTTCCGTCGATCGGAGCGGCCGTCGGCGTCACCGAGGTCATCTCGCGCTACAAGGATGCTCCCTTCCTCGCCGCCCAGA CCGGCCCGGCGCGCGCCTACGTTCTCGTCAATGCGCTGGCCGCCCTGTTCGCCTACGTGCTGATCCGAAACTTCGACTTC AAATTTGGCGCCCAGGACCAGGTGATCCTGGTGCAGGCCCTGGTCGCGAGCCTCGGCTCGATGGCATTCTTCCGCAGTTC ATTGTTCTCGATGAAGGTGGGGGAGACCGATGTTTCGGTCGGGCCCGCGATCTTCTTCCAGATCCTCCTGTTCGCCACCG ATCGCGCCTGCGATCGCGAGCGAGCCAAGCCGCGGTCGGCCGAGGTCATCCGGATCATGCAGGGGGTGTCGTTCGAGCTC GCCCGGGACTCGCTGCCGAGCTTCTGCTTCGAGCTCATGCAGAACATTCCGGCCAGCGAGCAGCAGAAGTTTCGCCTAGT GATCGACGCGCTGGCCTCATCGACGCGGATGCCGGACAGCGTCAAGGTGCTCAATCTCGGGCTCATGCTGATGAACGCGG TGGGGCAGCAGGTGCTCGAAGCCGCGGTCGCCGCGCTGGGTGAAAAGATTCAAGGCCCCGCCAAGCTCGAGCTGAAGGTT TTCATCGCGCTGCAGCGGGCCGATTTCGACAAGGCCTATCCGCTGCTCGTCGACATCGCCTTCATCATGTCGCGCTACGG CTCCCCGGCCGCCCAGGAGGCTGCGAAGACTGCGGTGCTCAAGGAGATCGAGCCGCTGACCCGGCAGCCGCATCTCGACA ATGGCGCCAAGATGACCCAGCTCGGGCTGTCTCTGCAGCAGCGCGTCGGCGACGCCGTGCTGCTGGCGGCCATCGAGCAG GTCGCCGATGGCATCAAGGGCGATCCTGACCGTGAGGACCAGGCGCAAGCCGAGGACGCAGAAAGCGCGCACGCGCAGAA GGGTCAGCAGCCTCAAACCCCGCCGCCAGGGGTTGTCGTGCCCAATGTCACGCCGATCCGTCCGGATGTGGTGGCTCCCG TCACAGACACGGACGCTGCGACGGATCACGCGGCGGGAGATGTCCCCAAAGCAGGCGGCGCGTCCGACTGA
Upstream 100 bases:
>100_bases GGATCAGCTGGTGCAGGGCTCGGATGACCGCCTGTCGCTGACGCCGCTGGGGCAGAAGGCGCATTCCATCGTTGCGACCT GATCCACTCTGCCGCTAAGG
Downstream 100 bases:
>100_bases GGAGGGCGCCGCACCGGCGCGGCCGGAGAACGAAGAAGCCCCGTCGCGGCGGTCAAAAAGAAAAGCCTCCGCCCTTGCGA GCGGAGGCCTGTGCGTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSIPQGEATMADPAGIAWQLSDLWYFGVPSIGAAVGVTEVISRYKDAPFLAAQTGPARAYVLVNALAALFAYVLIRNFDF KFGAQDQVILVQALVASLGSMAFFRSSLFSMKVGETDVSVGPAIFFQILLFATDRACDRERAKPRSAEVIRIMQGVSFEL ARDSLPSFCFELMQNIPASEQQKFRLVIDALASSTRMPDSVKVLNLGLMLMNAVGQQVLEAAVAALGEKIQGPAKLELKV FIALQRADFDKAYPLLVDIAFIMSRYGSPAAQEAAKTAVLKEIEPLTRQPHLDNGAKMTQLGLSLQQRVGDAVLLAAIEQ VADGIKGDPDREDQAQAEDAESAHAQKGQQPQTPPPGVVVPNVTPIRPDVVAPVTDTDAATDHAAGDVPKAGGASD
Sequences:
>Translated_396_residues MSIPQGEATMADPAGIAWQLSDLWYFGVPSIGAAVGVTEVISRYKDAPFLAAQTGPARAYVLVNALAALFAYVLIRNFDF KFGAQDQVILVQALVASLGSMAFFRSSLFSMKVGETDVSVGPAIFFQILLFATDRACDRERAKPRSAEVIRIMQGVSFEL ARDSLPSFCFELMQNIPASEQQKFRLVIDALASSTRMPDSVKVLNLGLMLMNAVGQQVLEAAVAALGEKIQGPAKLELKV FIALQRADFDKAYPLLVDIAFIMSRYGSPAAQEAAKTAVLKEIEPLTRQPHLDNGAKMTQLGLSLQQRVGDAVLLAAIEQ VADGIKGDPDREDQAQAEDAESAHAQKGQQPQTPPPGVVVPNVTPIRPDVVAPVTDTDAATDHAAGDVPKAGGASD >Mature_395_residues SIPQGEATMADPAGIAWQLSDLWYFGVPSIGAAVGVTEVISRYKDAPFLAAQTGPARAYVLVNALAALFAYVLIRNFDFK FGAQDQVILVQALVASLGSMAFFRSSLFSMKVGETDVSVGPAIFFQILLFATDRACDRERAKPRSAEVIRIMQGVSFELA RDSLPSFCFELMQNIPASEQQKFRLVIDALASSTRMPDSVKVLNLGLMLMNAVGQQVLEAAVAALGEKIQGPAKLELKVF IALQRADFDKAYPLLVDIAFIMSRYGSPAAQEAAKTAVLKEIEPLTRQPHLDNGAKMTQLGLSLQQRVGDAVLLAAIEQV ADGIKGDPDREDQAQAEDAESAHAQKGQQPQTPPPGVVVPNVTPIRPDVVAPVTDTDAATDHAAGDVPKAGGASD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42293; Mature: 42162
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPQGEATMADPAGIAWQLSDLWYFGVPSIGAAVGVTEVISRYKDAPFLAAQTGPARAY CCCCCCCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH VLVNALAALFAYVLIRNFDFKFGAQDQVILVQALVASLGSMAFFRSSLFSMKVGETDVSV HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPAIFFQILLFATDRACDRERAKPRSAEVIRIMQGVSFELARDSLPSFCFELMQNIPASE HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH QQKFRLVIDALASSTRMPDSVKVLNLGLMLMNAVGQQVLEAAVAALGEKIQGPAKLELKV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE FIALQRADFDKAYPLLVDIAFIMSRYGSPAAQEAAKTAVLKEIEPLTRQPHLDNGAKMTQ EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LGLSLQQRVGDAVLLAAIEQVADGIKGDPDREDQAQAEDAESAHAQKGQQPQTPPPGVVV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEC PNVTPIRPDVVAPVTDTDAATDHAAGDVPKAGGASD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SIPQGEATMADPAGIAWQLSDLWYFGVPSIGAAVGVTEVISRYKDAPFLAAQTGPARAY CCCCCCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH VLVNALAALFAYVLIRNFDFKFGAQDQVILVQALVASLGSMAFFRSSLFSMKVGETDVSV HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPAIFFQILLFATDRACDRERAKPRSAEVIRIMQGVSFELARDSLPSFCFELMQNIPASE HHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH QQKFRLVIDALASSTRMPDSVKVLNLGLMLMNAVGQQVLEAAVAALGEKIQGPAKLELKV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE FIALQRADFDKAYPLLVDIAFIMSRYGSPAAQEAAKTAVLKEIEPLTRQPHLDNGAKMTQ EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LGLSLQQRVGDAVLLAAIEQVADGIKGDPDREDQAQAEDAESAHAQKGQQPQTPPPGVVV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEC PNVTPIRPDVVAPVTDTDAATDHAAGDVPKAGGASD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA