Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340898
Identifier: 146340898
GI number: 146340898
Start: 4147577
End: 4149613
Strand: Reverse
Name: 146340898
Synonym: BRADO3964
Alternate gene names: NA
Gene position: 4149613-4147577 (Counterclockwise)
Preceding gene: 146340908
Following gene: 146340897
Centisome position: 55.65
GC content: 64.7
Gene sequence:
>2037_bases GTGTTCGACGAGCCGAAACGGGCTCGGGCCGCTGAAACAAGAGTCGATCACCGGTTCAGCGGTGCGTCGCGCCGATTGCG TGTGCGCAAGGCGGGAGGCGCACGCATGAAAATTCGAAAGACCGACTACGGCACGATCCTGCTCCATTGGACGCTGGTCG GCGCAACCGTCATCGCGTTCCTCACGGGGCTGCGCATGGCGACGGAAGCGCCGGGCCACGCTTGGATCGCCAACAATCTC GATTGGATGCTGCCGCGGCATCGCACCTGGACATGGCACATGCCCGCAGGCGTCGTGCTCGCGAGCGTCGCGGTCGCCTA CATGATCTACATCGCAAAGTCGGGGCTTGGCCGCCGCGTCGCCATCGACAAGATGCGCTTCAAGGGGCTGCTCGGCCGCC GACCGGCGCGGCTCGGCTCGATCAGCGTCATGCTGCATTGGGTGCTCTTCATCGCGATGGGCACGCTGATCATCACGGGC GGCCTGCTGTTCTTCGGCGTTGCCTCCGGCTACTCGACGATGATGATCCATTGGTACGCCACGTGGGTCATCCCTGTCTT CGTCGTGCTCCACGTCCTGGTTCATTTCAGCATCGGTGGAAAGATGCAGTTGTATCGCGTGTTCCGTCCCGCACCCCTGC CGCCGCCGCCGCCGAAGCTCGATCCGGTCGAACTTCTCACCATGCTCGTCGAGCAGTCCGAGAAGCTCGAGGAGGCCGAA GCCCCGCCCAAAAAGCCTGCGCCTGCCGCCGCACGTCAGGCGGTGCGTGAGCCGATGCCGGCGCCGCGGCGCATGGAGGA GCCGATGCGGGGACGTCCCGAGCCACGCATGCCGGCAGGCCGCATGCGTCCCCCGGCGCCCGCGAAGGGCAATTCCCGTC GCCGCAACCCGACGTTCCAGGCCAATCCGTTCATGGTCGCGACGGCCGCAGCCATCGTGATCGGTTCCGCGATGTTCGCG GCCGACTACTACGCCGAGGATACGGTGACGGTGTATCGGATTGCCACGTCAGATGCTCCGACCCTCGACGGTGATTCGTC CGATCGCGTCTGGCGCAACATCCAGCCGCACATGGTGACGACCAACCAGGGCGACAATTTCGACGGCACCGGCGAGTCGA AGGTGTGGATCAAGGCGGCGCATGACGGCACGTGGGTGTACTTCCTCGTCATCTGGGAGGATCCGACGCGCTCGCTGAAG CAATTGCCGCTGATCAAGAAGGCTGACGGCTGGCATCTGCTGCAGAACGGCTTCGACAAGGGCGATGAGAACGACTTCAA CGAGGACAAGTTCTCGCTGCTGTTCACCACCCTGCCGATCACCTTGGCGGCGGACCGTACGTTCCACATGAGCTCGCAGC CGATGCCGGACAAGCCGGCGACGCTGTCGGGCCGCGGCATTCACTACACGCCGGCGCCGAATCTCTACGCCGATGCATGG CTGTGGAAGGCCACGAGCGGCGGTCCGACGGGCTGGATGGACGACGATCATTTCGGGCCTCCTGCCGAACCGACGCCGGA TCAGGTGAAAGGACTGACGCCCTACAAGGGAGGGTTTGCGCCGGATCCGGGAACTGCCAACTACACGGACAACTTCGTGA TCGACAGGGAGGCCGCCAGGCTGGGCAATCGGGGCGTGAGACCGAAGCGCCTGCCGAAGGACGTCGCTGCGATGACGGCG GCGATGGGCGAGATCAATCTCGATCCGAACATCGGCGAGAGCGAGGGGGCGCGCTGGTTCATGACGGAAGCGGAATCCGT GCCCTACTCCGCGGAGGCGGATGCGCAGACGCCGATCGGCACGGTCGTGCCCGGAGTCTTGATCAGCGGCGAGTTCACCG GCGACCGCGCCGACATTCGCTGTGCGGCGCGTTGGGCGGCGGGCCACTGGACGCTCGAAATTGCCCGCAAATTGGACACG AAAAGCAAGTACGACGTACCGATCAAGAACGGTGTCTTCATGCGAGTCGCGGCGTTCGACCACACCCAGATCCGACATAC GAGGCAGATCCGGCCGATGCGACTTGAGGTGCAGTGA
Upstream 100 bases:
>100_bases GAGAGTATCCGGGGGACGAAGAGTTGTTGGACGACATCACCATCATCGGGGCGCGTGATGCAGGAATGCATTCAGAGCGG GGGGCGCAGTTCAGGGGTGC
Downstream 100 bases:
>100_bases TGGGTAAGATTTGCAAAATCCAGTACAACAGGGAAACGTTCTACGCGAATGTGGGCGATATCCTGCTCGACGGCGCCATC AACAGTGGCGTGGATCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Ankyrin Repeat Protein
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MFDEPKRARAAETRVDHRFSGASRRLRVRKAGGARMKIRKTDYGTILLHWTLVGATVIAFLTGLRMATEAPGHAWIANNL DWMLPRHRTWTWHMPAGVVLASVAVAYMIYIAKSGLGRRVAIDKMRFKGLLGRRPARLGSISVMLHWVLFIAMGTLIITG GLLFFGVASGYSTMMIHWYATWVIPVFVVLHVLVHFSIGGKMQLYRVFRPAPLPPPPPKLDPVELLTMLVEQSEKLEEAE APPKKPAPAAARQAVREPMPAPRRMEEPMRGRPEPRMPAGRMRPPAPAKGNSRRRNPTFQANPFMVATAAAIVIGSAMFA ADYYAEDTVTVYRIATSDAPTLDGDSSDRVWRNIQPHMVTTNQGDNFDGTGESKVWIKAAHDGTWVYFLVIWEDPTRSLK QLPLIKKADGWHLLQNGFDKGDENDFNEDKFSLLFTTLPITLAADRTFHMSSQPMPDKPATLSGRGIHYTPAPNLYADAW LWKATSGGPTGWMDDDHFGPPAEPTPDQVKGLTPYKGGFAPDPGTANYTDNFVIDREAARLGNRGVRPKRLPKDVAAMTA AMGEINLDPNIGESEGARWFMTEAESVPYSAEADAQTPIGTVVPGVLISGEFTGDRADIRCAARWAAGHWTLEIARKLDT KSKYDVPIKNGVFMRVAAFDHTQIRHTRQIRPMRLEVQ
Sequences:
>Translated_678_residues MFDEPKRARAAETRVDHRFSGASRRLRVRKAGGARMKIRKTDYGTILLHWTLVGATVIAFLTGLRMATEAPGHAWIANNL DWMLPRHRTWTWHMPAGVVLASVAVAYMIYIAKSGLGRRVAIDKMRFKGLLGRRPARLGSISVMLHWVLFIAMGTLIITG GLLFFGVASGYSTMMIHWYATWVIPVFVVLHVLVHFSIGGKMQLYRVFRPAPLPPPPPKLDPVELLTMLVEQSEKLEEAE APPKKPAPAAARQAVREPMPAPRRMEEPMRGRPEPRMPAGRMRPPAPAKGNSRRRNPTFQANPFMVATAAAIVIGSAMFA ADYYAEDTVTVYRIATSDAPTLDGDSSDRVWRNIQPHMVTTNQGDNFDGTGESKVWIKAAHDGTWVYFLVIWEDPTRSLK QLPLIKKADGWHLLQNGFDKGDENDFNEDKFSLLFTTLPITLAADRTFHMSSQPMPDKPATLSGRGIHYTPAPNLYADAW LWKATSGGPTGWMDDDHFGPPAEPTPDQVKGLTPYKGGFAPDPGTANYTDNFVIDREAARLGNRGVRPKRLPKDVAAMTA AMGEINLDPNIGESEGARWFMTEAESVPYSAEADAQTPIGTVVPGVLISGEFTGDRADIRCAARWAAGHWTLEIARKLDT KSKYDVPIKNGVFMRVAAFDHTQIRHTRQIRPMRLEVQ >Mature_678_residues MFDEPKRARAAETRVDHRFSGASRRLRVRKAGGARMKIRKTDYGTILLHWTLVGATVIAFLTGLRMATEAPGHAWIANNL DWMLPRHRTWTWHMPAGVVLASVAVAYMIYIAKSGLGRRVAIDKMRFKGLLGRRPARLGSISVMLHWVLFIAMGTLIITG GLLFFGVASGYSTMMIHWYATWVIPVFVVLHVLVHFSIGGKMQLYRVFRPAPLPPPPPKLDPVELLTMLVEQSEKLEEAE APPKKPAPAAARQAVREPMPAPRRMEEPMRGRPEPRMPAGRMRPPAPAKGNSRRRNPTFQANPFMVATAAAIVIGSAMFA ADYYAEDTVTVYRIATSDAPTLDGDSSDRVWRNIQPHMVTTNQGDNFDGTGESKVWIKAAHDGTWVYFLVIWEDPTRSLK QLPLIKKADGWHLLQNGFDKGDENDFNEDKFSLLFTTLPITLAADRTFHMSSQPMPDKPATLSGRGIHYTPAPNLYADAW LWKATSGGPTGWMDDDHFGPPAEPTPDQVKGLTPYKGGFAPDPGTANYTDNFVIDREAARLGNRGVRPKRLPKDVAAMTA AMGEINLDPNIGESEGARWFMTEAESVPYSAEADAQTPIGTVVPGVLISGEFTGDRADIRCAARWAAGHWTLEIARKLDT KSKYDVPIKNGVFMRVAAFDHTQIRHTRQIRPMRLEVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75357; Mature: 75357
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDEPKRARAAETRVDHRFSGASRRLRVRKAGGARMKIRKTDYGTILLHWTLVGATVIAF CCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEHHHHHHHHHHHH LTGLRMATEAPGHAWIANNLDWMLPRHRTWTWHMPAGVVLASVAVAYMIYIAKSGLGRRV HHHHHHHHCCCCCEEEECCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEE AIDKMRFKGLLGRRPARLGSISVMLHWVLFIAMGTLIITGGLLFFGVASGYSTMMIHWYA EHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH TWVIPVFVVLHVLVHFSIGGKMQLYRVFRPAPLPPPPPKLDPVELLTMLVEQSEKLEEAE HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC APPKKPAPAAARQAVREPMPAPRRMEEPMRGRPEPRMPAGRMRPPAPAKGNSRRRNPTFQ CCCCCCCCHHHHHHHHCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANPFMVATAAAIVIGSAMFAADYYAEDTVTVYRIATSDAPTLDGDSSDRVWRNIQPHMVT CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEE TNQGDNFDGTGESKVWIKAAHDGTWVYFLVIWEDPTRSLKQLPLIKKADGWHLLQNGFDK CCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHCCCEECCCCCHHHHCCCCC GDENDFNEDKFSLLFTTLPITLAADRTFHMSSQPMPDKPATLSGRGIHYTPAPNLYADAW CCCCCCCCCHHEEEEEECCEEEECCCEEECCCCCCCCCCCCCCCCCEEECCCCCCEECCE LWKATSGGPTGWMDDDHFGPPAEPTPDQVKGLTPYKGGFAPDPGTANYTDNFVIDREAAR EEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHH LGNRGVRPKRLPKDVAAMTAAMGEINLDPNIGESEGARWFMTEAESVPYSAEADAQTPIG HCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCH TVVPGVLISGEFTGDRADIRCAARWAAGHWTLEIARKLDTKSKYDVPIKNGVFMRVAAFD HHCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECC HTQIRHTRQIRPMRLEVQ CHHHHHHHCCCCEEEEEC >Mature Secondary Structure MFDEPKRARAAETRVDHRFSGASRRLRVRKAGGARMKIRKTDYGTILLHWTLVGATVIAF CCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEHHHHHHHHHHHH LTGLRMATEAPGHAWIANNLDWMLPRHRTWTWHMPAGVVLASVAVAYMIYIAKSGLGRRV HHHHHHHHCCCCCEEEECCCCEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEE AIDKMRFKGLLGRRPARLGSISVMLHWVLFIAMGTLIITGGLLFFGVASGYSTMMIHWYA EHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH TWVIPVFVVLHVLVHFSIGGKMQLYRVFRPAPLPPPPPKLDPVELLTMLVEQSEKLEEAE HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC APPKKPAPAAARQAVREPMPAPRRMEEPMRGRPEPRMPAGRMRPPAPAKGNSRRRNPTFQ CCCCCCCCHHHHHHHHCCCCCCHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANPFMVATAAAIVIGSAMFAADYYAEDTVTVYRIATSDAPTLDGDSSDRVWRNIQPHMVT CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEE TNQGDNFDGTGESKVWIKAAHDGTWVYFLVIWEDPTRSLKQLPLIKKADGWHLLQNGFDK CCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHCCCEECCCCCHHHHCCCCC GDENDFNEDKFSLLFTTLPITLAADRTFHMSSQPMPDKPATLSGRGIHYTPAPNLYADAW CCCCCCCCCHHEEEEEECCEEEECCCEEECCCCCCCCCCCCCCCCCEEECCCCCCEECCE LWKATSGGPTGWMDDDHFGPPAEPTPDQVKGLTPYKGGFAPDPGTANYTDNFVIDREAAR EEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHH LGNRGVRPKRLPKDVAAMTAAMGEINLDPNIGESEGARWFMTEAESVPYSAEADAQTPIG HCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCH TVVPGVLISGEFTGDRADIRCAARWAAGHWTLEIARKLDTKSKYDVPIKNGVFMRVAAFD HHCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECC HTQIRHTRQIRPMRLEVQ CHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA