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The map label for this gene is ndoR [H]

Identifier: 146340897

GI number: 146340897

Start: 4146540

End: 4147577

Strand: Reverse

Name: ndoR [H]

Synonym: BRADO3963

Alternate gene names: 146340897

Gene position: 4147577-4146540 (Counterclockwise)

Preceding gene: 146340898

Following gene: 146340895

Centisome position: 55.62

GC content: 64.07

Gene sequence:

>1038_bases
ATGGGTAAGATTTGCAAAATCCAGTACAACAGGGAAACGTTCTACGCGAATGTGGGCGATATCCTGCTCGACGGCGCCAT
CAACAGTGGCGTGGATCTGCCCCATGACTGCCGCAGTGGTATTTGTGGCTCCTGCAAGGTGACGGTTGTCGACGGCAAGC
TGTTCGGCGGCATGGAAGGCGACATGGCACATGCCTGCCAGGCGCGCGTGGTGTCGGATCTGAAGATCATCACCGAGCCG
GTGCCGGAGACGGTGACGATGAACTGCGAGGTCGGTGATCTCGTTCGTCTGGCGCCCGACGTGGTCGGGGTCACGATCGA
GATGCCGAAGCCGCTGCGCTTCTTCCCCGGCCAGTATGCGAAGGTGCAGTATCGCGGTTTTCCGACGCGCTGCTACAGCC
CGACCTATCCGATGGTTGGCGCGCCCGACAGCCATCTTCTCTATCTCCACATCCGCATCCTCAAGGACGGCCTGGTGTCG
TCGGCGCTCGGCCGGGACATTCAGGTCGGCCACCGTGTCAAGCTGACCGCGCCGCTCGGCACCGCCTTCTTCCGGCAGAA
GCATCGCGGCCGAATCATCCTGGTCGCGAGCGGCACGGGCTTTGCGCCGATGTGGGCGATCGCGGTCGCCGCGATCACCG
AAAATCCGAAGCGCGAGATCGTCTTCATCGTCGTGTCGCGGACGCTGCAATCGTTCTACATGCACCAGGCGCTTTGCCGC
CTGGCGCGCTTCCCGAATGTGAAGATCATCCCGATCGTGTCGGAGCCGCAGAACGTCTCGCCGGCGATTCGCAGCGGCCG
TCCGACCGAGCACATGCCCGAGCTTACGCCGAACGACGTGGTCTACACCTGCGGTGCGCCGGCGATGACTGAAGCGGTGG
CGAAGATGGCGCGCTCGGCTGGCGCGAAGTGCCATTGCGATCCGTTCGTCTCGTCGGCCCAGCCGTCGGAGTCGAGCGGC
GGCGGCTTGATGGATCGGCTCGCAGGCTGGCTCGACAGCCAGCGCGGTCGTCCGGCGATGTTCCAGCCGGCAGAATGA

Upstream 100 bases:

>100_bases
TACCGATCAAGAACGGTGTCTTCATGCGAGTCGCGGCGTTCGACCACACCCAGATCCGACATACGAGGCAGATCCGGCCG
ATGCGACTTGAGGTGCAGTG

Downstream 100 bases:

>100_bases
GAACGCCGCGGCCGCGGAGCTCGCGGCCGCAACAACTTCCCGGCTAACCGGCGACGAAGGCGAGCAGGTTGCCCGTGGCC
GAGGCCGGCGGCACGACGAG

Product: putative ferredoxin--NAD(+) reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MGKICKIQYNRETFYANVGDILLDGAINSGVDLPHDCRSGICGSCKVTVVDGKLFGGMEGDMAHACQARVVSDLKIITEP
VPETVTMNCEVGDLVRLAPDVVGVTIEMPKPLRFFPGQYAKVQYRGFPTRCYSPTYPMVGAPDSHLLYLHIRILKDGLVS
SALGRDIQVGHRVKLTAPLGTAFFRQKHRGRIILVASGTGFAPMWAIAVAAITENPKREIVFIVVSRTLQSFYMHQALCR
LARFPNVKIIPIVSEPQNVSPAIRSGRPTEHMPELTPNDVVYTCGAPAMTEAVAKMARSAGAKCHCDPFVSSAQPSESSG
GGLMDRLAGWLDSQRGRPAMFQPAE

Sequences:

>Translated_345_residues
MGKICKIQYNRETFYANVGDILLDGAINSGVDLPHDCRSGICGSCKVTVVDGKLFGGMEGDMAHACQARVVSDLKIITEP
VPETVTMNCEVGDLVRLAPDVVGVTIEMPKPLRFFPGQYAKVQYRGFPTRCYSPTYPMVGAPDSHLLYLHIRILKDGLVS
SALGRDIQVGHRVKLTAPLGTAFFRQKHRGRIILVASGTGFAPMWAIAVAAITENPKREIVFIVVSRTLQSFYMHQALCR
LARFPNVKIIPIVSEPQNVSPAIRSGRPTEHMPELTPNDVVYTCGAPAMTEAVAKMARSAGAKCHCDPFVSSAQPSESSG
GGLMDRLAGWLDSQRGRPAMFQPAE
>Mature_344_residues
GKICKIQYNRETFYANVGDILLDGAINSGVDLPHDCRSGICGSCKVTVVDGKLFGGMEGDMAHACQARVVSDLKIITEPV
PETVTMNCEVGDLVRLAPDVVGVTIEMPKPLRFFPGQYAKVQYRGFPTRCYSPTYPMVGAPDSHLLYLHIRILKDGLVSS
ALGRDIQVGHRVKLTAPLGTAFFRQKHRGRIILVASGTGFAPMWAIAVAAITENPKREIVFIVVSRTLQSFYMHQALCRL
ARFPNVKIIPIVSEPQNVSPAIRSGRPTEHMPELTPNDVVYTCGAPAMTEAVAKMARSAGAKCHCDPFVSSAQPSESSGG
GLMDRLAGWLDSQRGRPAMFQPAE

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. Transfers electrons from ferredoxin (ndoA) to NADH [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367314, Length=177, Percent_Identity=28.2485875706215, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 37486; Mature: 37355

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKICKIQYNRETFYANVGDILLDGAINSGVDLPHDCRSGICGSCKVTVVDGKLFGGMEG
CCCEEEEEECCEEEEECCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEEECCCEECCCCC
DMAHACQARVVSDLKIITEPVPETVTMNCEVGDLVRLAPDVVGVTIEMPKPLRFFPGQYA
CHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCEEEEEECCCCCEECCCCCE
KVQYRGFPTRCYSPTYPMVGAPDSHLLYLHIRILKDGLVSSALGRDIQVGHRVKLTAPLG
EEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCEECCCEEEEECCCC
TAFFRQKHRGRIILVASGTGFAPMWAIAVAAITENPKREIVFIVVSRTLQSFYMHQALCR
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH
LARFPNVKIIPIVSEPQNVSPAIRSGRPTEHMPELTPNDVVYTCGAPAMTEAVAKMARSA
HHHCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHC
GAKCHCDPFVSSAQPSESSGGGLMDRLAGWLDSQRGRPAMFQPAE
CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GKICKIQYNRETFYANVGDILLDGAINSGVDLPHDCRSGICGSCKVTVVDGKLFGGMEG
CCEEEEEECCEEEEECCCCEEEECCCCCCCCCCHHHHCCCCCCEEEEEECCCEECCCCC
DMAHACQARVVSDLKIITEPVPETVTMNCEVGDLVRLAPDVVGVTIEMPKPLRFFPGQYA
CHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCEEEEEECCCCCEECCCCCE
KVQYRGFPTRCYSPTYPMVGAPDSHLLYLHIRILKDGLVSSALGRDIQVGHRVKLTAPLG
EEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCCEECCCEEEEECCCC
TAFFRQKHRGRIILVASGTGFAPMWAIAVAAITENPKREIVFIVVSRTLQSFYMHQALCR
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH
LARFPNVKIIPIVSEPQNVSPAIRSGRPTEHMPELTPNDVVYTCGAPAMTEAVAKMARSA
HHHCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHC
GAKCHCDPFVSSAQPSESSGGGLMDRLAGWLDSQRGRPAMFQPAE
CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8486285; 8787402; 2294092 [H]