Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is yjbB [H]
Identifier: 146340852
GI number: 146340852
Start: 4093990
End: 4095687
Strand: Direct
Name: yjbB [H]
Synonym: BRADO3915
Alternate gene names: 146340852
Gene position: 4093990-4095687 (Clockwise)
Preceding gene: 146340851
Following gene: 146340860
Centisome position: 54.9
GC content: 65.67
Gene sequence:
>1698_bases ATGGTTCTGCTCGATCTGATGGGCGGCGTCGCGTTGCTGCTGTGGGGCCTTCACATGGTCCACAGCGGCATTCTGCGCGC GTTTGGACCGGATCTTCGGCTGTTGCTGTCGCGCGCGCTGCGCAATCGCTTCAGCGCGCTGCTCGCCGGAGTGGGCCTCA CGGCCCTGCTCCAGAGCAGCACGGCGACCGCGCTCATCACCACATCCTTCGCCGCCGAAGGCCTCGTCGGCCTGATCCCG GCGCTCGCGATCATGCTCGGCGCCAATATCGGCACCACGCTGATCGTTCAGGTGCTGTCGTTCAACGTCGCCGCTGTCGC GCCGGTGCTGTTCGTGCTCGGGCTGGTGGCGTTCCGCAGCGGACCGCGATCTCGGATCAAGGACCTTGGGCGCGTGTGCA TCGGCCTCGGCCTGATGCTGCTGTCGCTGCATATCCTGATCGACACGCTGGCGCCCGCGGAACAGGCGCCGGCCATGCGC GTCTTCATGCAGGCCATCACAGCGGACGTGACACTGTGCGTGATCTTCGGCGCCGTCGTCACCTGGATCGTGCATTCCAG CGTCGCCAGCGTGCTGCTGGTGATGTCGCTCGCCTATGCGCATTTCATCACCGCCGATGCGGCGCTCGCGCTGGTGCTCG GAGCCAATCTCGGCAGTGCCGTGAATCCCGTGTTCGAAGGGGCGAAGCGTGACAATCCGGCGAGCTATCGTCTGCCGGTC GGCAACCTTCTCAACCGCATCATCGGCATTGCCCTGATCGTGCCCTTCCTGCATCCGCTCGCCGCGCAGCTGCAGCTGTG GCAGCCGGATCTGTCGAAGCTGACGGCCCAGTTCCACATGGCCTTCAATCTCGGCACAGCGGCGGCGTTCATCGGCCTGC TCGGCGGGATGGAGAAGATTCTCGTACGGCTGTTTCCGGACCGCCCGGCCGAGGTCGATCCGGCAAAGCCGCGCTATCTC GATGAAGCCGCGCTGGAGACTCCGTCGCTCGCCCTCGCCGATGCCGCGCGCGAAGCGCTGCGCATGGGCGACCTGGTCGA GACCATGCTGCGCAACGTGATGACGGCGATGATGACCAACGATCGCGGTCTGGTCGATCAGGTCTCGCGCACCGACAACA TCGTCGACCGGCTCGACGAGGCGATCAAGCTCTACATCACCAAGCTCACCCGCGGCAGCCTCGACGAGCGCGAGGGCAAG CGCGCGATGGAAATCATCTCCTTCGCGATCAACCTCGAGCATATCGGCGACATCATCGACAAGAACCTGAGCGAGCTCGC CACCAAGAAGATCAAGCGGCGCTTCCAGTTCTCGATCGAAGGCGCCGACGAGCTGCAGTCGTTCCACCGCCAGATCATGG AATCGCTGCGCATTGCCTTCGGTATCTTCATGTCGGGCGACGCGCAGCGGGCGCATCGCCTGCTCGACCAGAAGGCCGAG CTCCGCAATGCCGAGCTCGCCGCCACCGAGCGGCACCTGGAGCGCCTGCGCGAAGGCCGTTCCGAGACGCTGGAAACCAC GTCGCTGCATCTCGACGTGCTGCGCGATCTCCGGCGCATCCACTCGCACATCTGCTCGGTCGCTTATCCGGTGCTTGATG CGGCGGGTGAAGTGGCGACGCGCCGGAGTGACGTGGCGGACGGCGTGGCACCCATCAGCCCCCTGTCCCCATCGCAAGCC CAGCCGCTGCCGCGCTGA
Upstream 100 bases:
>100_bases AACGCCCGGCGATCAGGCAGCCGGGGCCGACAAAATAGCGTTGATCCCCGGCGGATTGGGCGTAGCCTTCGCGGCAGGGC TACGGACACGAACGGGAATC
Downstream 100 bases:
>100_bases GCGCCTTGCGGGCTGCGAATTAGTTCGCTCCGTCATGGCCGGGCTTGTCCTGGCATCCACGTTGTCCGGCATGCTCGGCT CGACGTGGATGCCCGGGACA
Product: putative Na+/phosphate transporter membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSSTATALITTSFAAEGLVGLIP ALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRSGPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMR VFMQAITADVTLCVIFGAVVTWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKILVRLFPDRPAEVDPAKPRYL DEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTNDRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGK RAMEIISFAINLEHIGDIIDKNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVATRRSDVADGVAPISPLSPSQA QPLPR
Sequences:
>Translated_565_residues MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSSTATALITTSFAAEGLVGLIP ALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRSGPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMR VFMQAITADVTLCVIFGAVVTWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKILVRLFPDRPAEVDPAKPRYL DEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTNDRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGK RAMEIISFAINLEHIGDIIDKNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVATRRSDVADGVAPISPLSPSQA QPLPR >Mature_565_residues MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSSTATALITTSFAAEGLVGLIP ALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRSGPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMR VFMQAITADVTLCVIFGAVVTWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKILVRLFPDRPAEVDPAKPRYL DEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTNDRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGK RAMEIISFAINLEHIGDIIDKNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVATRRSDVADGVAPISPLSPSQA QPLPR
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=537, Percent_Identity=38.1750465549348, Blast_Score=340, Evalue=1e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 61247; Mature: 61247
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TATALITTSFAAEGLVGLIPALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC GPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMRVFMQAITADVTLCVIFGAVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHH TWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCH GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRLFPDRPAEVDPAKPRYLDEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTN HHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGKRAMEIISFAINLEHIGDIID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVAT HCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRSDVADGVAPISPLSPSQAQPLPR HHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TATALITTSFAAEGLVGLIPALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC GPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMRVFMQAITADVTLCVIFGAVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHH TWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCH GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRLFPDRPAEVDPAKPRYLDEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTN HHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGKRAMEIISFAINLEHIGDIID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVAT HCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRSDVADGVAPISPLSPSQAQPLPR HHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]