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The map label for this gene is ttuB [H]

Identifier: 146340806

GI number: 146340806

Start: 4039345

End: 4040664

Strand: Reverse

Name: ttuB [H]

Synonym: BRADO3865

Alternate gene names: 146340806

Gene position: 4040664-4039345 (Counterclockwise)

Preceding gene: 146340807

Following gene: 146340805

Centisome position: 54.19

GC content: 66.97

Gene sequence:

>1320_bases
ATGGAGAGCGAGGCTGCGCGCGCGGCGCCCGCATTCGACATCACGCCGACGATGCGCAAGGTGATGCGACGCATCATCCC
GTTCATCTTCGTCTGCTACGTCGTCAGCTATCTCGACCGCATCAATGTCGGCTTCGCCGGCCTCCAGATGAACCGCGATC
TCGGCCTCACGCCCTCGCAGTTCGGCTGGGGCGCCGGGCTGTTCTTCCTCGGCTATTTTCTCTGCGAGATCCCCAGCAAC
CTGATGATGCAGCGCGTCGGCGCGCGACTGTGGATCGCGCGCATCATGATCACCTGGGGCCTGTTGTCGACGCTCACCTG
CCTCGTGACCGGGCCGGCAAGCTTCTCGGTGATGCGCCTGCTGCTCGGCATGGCGGAAGCCGGCTTCACGCCGGGTGTGT
ATCTCTACTTCACCTGCTGGTTTCCCGGCGTCTGGCGCGGCCGCGCGACCGCCGCCTTCCTGGTCGGCATTCCCGTCGCC
AACATGATCGGCTCGCCGATCTCGGGCGCGCTGCTCACGATGGACGGCTTTGCCGGCCTCGCCGGATGGCAATGGCTGCT
GATCATCGAGGGGCTGCCGGCTGTCCTGCTCGGCATCGCCTGCTTGTTCGTGCTGTCGGATCGCCCTAGCGAGGCGAAAT
GGCTCGACGCGGACGAGCGACGTGCGCTCGATGCGCAATTGACGGCAGAGCAGGCGACCTTGGCCGCCCGCCACGGCAAC
ACGCTGCGCGATGCGTTCGCCAATCCAAAGGTGTTCGTGCTGGCGCTGGTGAATTTCTGCGGCATCTGCGGCTCGCTTGG
CGTCGGCCTATGGCTGCCGCAGATCGTGCGCGGCTTCGGTGTCAGCTATGTCGCGGTCGGCTTCATCTCTGCGGCGCCGT
ACGCGCTCGGCGCGATCTGCATGCTGCTGTGGGCACGCCTCGCCAACCGCGCCCGGCACCGCCTCTGGTTCGTCTGCGGC
GCGCTGGCGACCGCAGGCGTGGCGCTGTCGGTCAGCGCGAGCTTCGCGGCGCCGCTGCCGGCCATGCTGGCGCTGACGGT
GACCGTCATCGGCATCCTGTCGTTCCAGGCGACCTATTGGGCGATCCCGTCCGGCTTTCTGACCGGGCGTGCGGCTGCGG
CCGGTCTCGCCCTGATCGTGTCGATCGGCAATCTCGGCGGCTTCGTCGGTCCCTACATGATCGGCTATCTCCGCGAGACG
ACGAAGAGCTTCTCGACGCCGCTCTATGTCCTGTCCGCGATCCTGCTCATCGGCACCGTCGTGATGGCCGTGCTCGGCGA
CCCCGCCCGCGACACGGTCAAAACGAAGGAGGCCGCATGA

Upstream 100 bases:

>100_bases
TTAGAAAAATGCAACACCGTTGCATTTTCAATTTTCGCCTCCTATGGTGCCCTCAAGCTCGGCCGTCACACGGCCCAACA
AGATGCCACGGAGGAACGGA

Downstream 100 bases:

>100_bases
TCACCCGTCGCAACCTGCTGGCCGCCGGCGCCGCCGCTCTGATCGGCACGAGACCCGCAGCCGCCGACAGCGTGCCGAAC
TCGGCCGGCTCGGAGCCGCC

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MESEAARAAPAFDITPTMRKVMRRIIPFIFVCYVVSYLDRINVGFAGLQMNRDLGLTPSQFGWGAGLFFLGYFLCEIPSN
LMMQRVGARLWIARIMITWGLLSTLTCLVTGPASFSVMRLLLGMAEAGFTPGVYLYFTCWFPGVWRGRATAAFLVGIPVA
NMIGSPISGALLTMDGFAGLAGWQWLLIIEGLPAVLLGIACLFVLSDRPSEAKWLDADERRALDAQLTAEQATLAARHGN
TLRDAFANPKVFVLALVNFCGICGSLGVGLWLPQIVRGFGVSYVAVGFISAAPYALGAICMLLWARLANRARHRLWFVCG
ALATAGVALSVSASFAAPLPAMLALTVTVIGILSFQATYWAIPSGFLTGRAAAAGLALIVSIGNLGGFVGPYMIGYLRET
TKSFSTPLYVLSAILLIGTVVMAVLGDPARDTVKTKEAA

Sequences:

>Translated_439_residues
MESEAARAAPAFDITPTMRKVMRRIIPFIFVCYVVSYLDRINVGFAGLQMNRDLGLTPSQFGWGAGLFFLGYFLCEIPSN
LMMQRVGARLWIARIMITWGLLSTLTCLVTGPASFSVMRLLLGMAEAGFTPGVYLYFTCWFPGVWRGRATAAFLVGIPVA
NMIGSPISGALLTMDGFAGLAGWQWLLIIEGLPAVLLGIACLFVLSDRPSEAKWLDADERRALDAQLTAEQATLAARHGN
TLRDAFANPKVFVLALVNFCGICGSLGVGLWLPQIVRGFGVSYVAVGFISAAPYALGAICMLLWARLANRARHRLWFVCG
ALATAGVALSVSASFAAPLPAMLALTVTVIGILSFQATYWAIPSGFLTGRAAAAGLALIVSIGNLGGFVGPYMIGYLRET
TKSFSTPLYVLSAILLIGTVVMAVLGDPARDTVKTKEAA
>Mature_439_residues
MESEAARAAPAFDITPTMRKVMRRIIPFIFVCYVVSYLDRINVGFAGLQMNRDLGLTPSQFGWGAGLFFLGYFLCEIPSN
LMMQRVGARLWIARIMITWGLLSTLTCLVTGPASFSVMRLLLGMAEAGFTPGVYLYFTCWFPGVWRGRATAAFLVGIPVA
NMIGSPISGALLTMDGFAGLAGWQWLLIIEGLPAVLLGIACLFVLSDRPSEAKWLDADERRALDAQLTAEQATLAARHGN
TLRDAFANPKVFVLALVNFCGICGSLGVGLWLPQIVRGFGVSYVAVGFISAAPYALGAICMLLWARLANRARHRLWFVCG
ALATAGVALSVSASFAAPLPAMLALTVTVIGILSFQATYWAIPSGFLTGRAAAAGLALIVSIGNLGGFVGPYMIGYLRET
TKSFSTPLYVLSAILLIGTVVMAVLGDPARDTVKTKEAA

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=411, Percent_Identity=34.0632603406326, Blast_Score=223, Evalue=3e-59,
Organism=Escherichia coli, GI2367379, Length=480, Percent_Identity=23.125, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789152, Length=438, Percent_Identity=23.5159817351598, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082320, Length=445, Percent_Identity=24.0449438202247, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789515, Length=441, Percent_Identity=23.3560090702948, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322025, Length=213, Percent_Identity=25.3521126760563, Blast_Score=89, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6322612, Length=240, Percent_Identity=25.8333333333333, Blast_Score=77, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6324410, Length=158, Percent_Identity=27.8481012658228, Blast_Score=77, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6319876, Length=256, Percent_Identity=24.21875, Blast_Score=74, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6321698, Length=324, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319250, Length=300, Percent_Identity=22, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46903; Mature: 46903

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESEAARAAPAFDITPTMRKVMRRIIPFIFVCYVVSYLDRINVGFAGLQMNRDLGLTPSQ
CCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
FGWGAGLFFLGYFLCEIPSNLMMQRVGARLWIARIMITWGLLSTLTCLVTGPASFSVMRL
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLGMAEAGFTPGVYLYFTCWFPGVWRGRATAAFLVGIPVANMIGSPISGALLTMDGFAGL
HHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCH
AGWQWLLIIEGLPAVLLGIACLFVLSDRPSEAKWLDADERRALDAQLTAEQATLAARHGN
HHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
TLRDAFANPKVFVLALVNFCGICGSLGVGLWLPQIVRGFGVSYVAVGFISAAPYALGAIC
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHH
MLLWARLANRARHRLWFVCGALATAGVALSVSASFAAPLPAMLALTVTVIGILSFQATYW
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIPSGFLTGRAAAAGLALIVSIGNLGGFVGPYMIGYLRETTKSFSTPLYVLSAILLIGTV
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VMAVLGDPARDTVKTKEAA
HHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MESEAARAAPAFDITPTMRKVMRRIIPFIFVCYVVSYLDRINVGFAGLQMNRDLGLTPSQ
CCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
FGWGAGLFFLGYFLCEIPSNLMMQRVGARLWIARIMITWGLLSTLTCLVTGPASFSVMRL
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLGMAEAGFTPGVYLYFTCWFPGVWRGRATAAFLVGIPVANMIGSPISGALLTMDGFAGL
HHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCH
AGWQWLLIIEGLPAVLLGIACLFVLSDRPSEAKWLDADERRALDAQLTAEQATLAARHGN
HHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
TLRDAFANPKVFVLALVNFCGICGSLGVGLWLPQIVRGFGVSYVAVGFISAAPYALGAIC
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHH
MLLWARLANRARHRLWFVCGALATAGVALSVSASFAAPLPAMLALTVTVIGILSFQATYW
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIPSGFLTGRAAAAGLALIVSIGNLGGFVGPYMIGYLRETTKSFSTPLYVLSAILLIGTV
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VMAVLGDPARDTVKTKEAA
HHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]