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The map label for this gene is allR [C]

Identifier: 146340799

GI number: 146340799

Start: 4032456

End: 4033190

Strand: Reverse

Name: allR [C]

Synonym: BRADO3858

Alternate gene names: 146340799

Gene position: 4033190-4032456 (Counterclockwise)

Preceding gene: 146340800

Following gene: 146340798

Centisome position: 54.09

GC content: 66.94

Gene sequence:

>735_bases
GTGGCGAAGACATCGAAAACCCCCAGCAAGACCGCGAAGGCCAAGACCGCGAAGGCCGAGACGACGTCGGGCCTGAAAGG
CGTCTCTGCCGTCGATCGGGCGCTGAGCGTGTTGACGGCCTTTCAACGCGGCGACGGCGAGGTCAGCCTCGCAGAGCTGA
CCAGGCGCACCGGACTGATCAAGACCACGGTCATGCGCATGGCGCTGTCGTTGGAAAGCTTCGGATTGATCCGGCGGGTC
GACGACGGCGGCTACCGGCTCGACGCCGAGGTGATGCGGCTTGCCGCCTGCTACCAGCATGCCTTCGGTCTCGCCGATCA
CGTGACACCCGTGCTGGAGAAGCTGGCGCGGGCGACCGGCGAAACGGCATCGTTCTATACGCGCCGGGGCGATCAGCGCC
TGTGCCTGTTCCGGGTCGAGAGCGCGAACCAGATTCGCATGCATGTCCAGCCTGGCGATCTCCGCCCGATGGACAAGTCG
GCCATTGCCCAGGTGCTTCGACATTTCGATCGCGGCCGCGCCACGGCGGAGATCGACACGCCGATTTTCACCAGCGGCGT
CACCGATCCGCATTCTGCGGCTGTTGCGACGCCGGTATTCGGGCCTGGCGGCGCGTTGCTCGGCGCTCTCGCCCTGTCCG
GTCCGGTCACCCGGTTGACCCCGGCGCGCGCCGAGGAGATCCGGCCGCTGCTGAAGACCGCCGGCATCGATTTGACCACG
GCATGTGGCGGGTAG

Upstream 100 bases:

>100_bases
TGGGCTGAGCCCCGGTTCGCGCCGCGTGAACTTCCTGTCGCGTATGTGTATACCCTCTCGAAACGGCCGCCCGATGGCGG
TCGGCTTCGGGAATCAGGAC

Downstream 100 bases:

>100_bases
GACCCCCGCGGCCCAGGCGCAATGGGCTGCAAAGGTTCCCGAATACCGCGTCATCGAAGGTGCCACAGATGAGAAATATT
GCAGACAAATCCGCGACGCG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; IclR Family Regulatory Protein; Transcriptional Regulator IclR; Regulatory Proteins IclR; IclR-Type Transcriptional Regulator; IclR Transcriptional Regulator; Regulatory Protein Containing IclR Domain; IclR Family Transcriptional Regulator Family; Transcriptional Regulatory Protein; Regulatory Protein IclR; Transcriptional Regulator Family Protein

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAKTSKTPSKTAKAKTAKAETTSGLKGVSAVDRALSVLTAFQRGDGEVSLAELTRRTGLIKTTVMRMALSLESFGLIRRV
DDGGYRLDAEVMRLAACYQHAFGLADHVTPVLEKLARATGETASFYTRRGDQRLCLFRVESANQIRMHVQPGDLRPMDKS
AIAQVLRHFDRGRATAEIDTPIFTSGVTDPHSAAVATPVFGPGGALLGALALSGPVTRLTPARAEEIRPLLKTAGIDLTT
ACGG

Sequences:

>Translated_244_residues
MAKTSKTPSKTAKAKTAKAETTSGLKGVSAVDRALSVLTAFQRGDGEVSLAELTRRTGLIKTTVMRMALSLESFGLIRRV
DDGGYRLDAEVMRLAACYQHAFGLADHVTPVLEKLARATGETASFYTRRGDQRLCLFRVESANQIRMHVQPGDLRPMDKS
AIAQVLRHFDRGRATAEIDTPIFTSGVTDPHSAAVATPVFGPGGALLGALALSGPVTRLTPARAEEIRPLLKTAGIDLTT
ACGG
>Mature_243_residues
AKTSKTPSKTAKAKTAKAETTSGLKGVSAVDRALSVLTAFQRGDGEVSLAELTRRTGLIKTTVMRMALSLESFGLIRRVD
DGGYRLDAEVMRLAACYQHAFGLADHVTPVLEKLARATGETASFYTRRGDQRLCLFRVESANQIRMHVQPGDLRPMDKSA
IAQVLRHFDRGRATAEIDTPIFTSGVTDPHSAAVATPVFGPGGALLGALALSGPVTRLTPARAEEIRPLLKTAGIDLTTA
CGG

Specific function: Negative Regulator Of Allantoin And Glyoxylate Utilization Operons. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25962; Mature: 25831

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTSKTPSKTAKAKTAKAETTSGLKGVSAVDRALSVLTAFQRGDGEVSLAELTRRTGLI
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KTTVMRMALSLESFGLIRRVDDGGYRLDAEVMRLAACYQHAFGLADHVTPVLEKLARATG
HHHHHHHHHHHHHHHHHEEECCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
ETASFYTRRGDQRLCLFRVESANQIRMHVQPGDLRPMDKSAIAQVLRHFDRGRATAEIDT
CHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
PIFTSGVTDPHSAAVATPVFGPGGALLGALALSGPVTRLTPARAEEIRPLLKTAGIDLTT
CEEECCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCCEEC
ACGG
CCCC
>Mature Secondary Structure 
AKTSKTPSKTAKAKTAKAETTSGLKGVSAVDRALSVLTAFQRGDGEVSLAELTRRTGLI
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
KTTVMRMALSLESFGLIRRVDDGGYRLDAEVMRLAACYQHAFGLADHVTPVLEKLARATG
HHHHHHHHHHHHHHHHHEEECCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
ETASFYTRRGDQRLCLFRVESANQIRMHVQPGDLRPMDKSAIAQVLRHFDRGRATAEIDT
CHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEECC
PIFTSGVTDPHSAAVATPVFGPGGALLGALALSGPVTRLTPARAEEIRPLLKTAGIDLTT
CEEECCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCCEEC
ACGG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA