Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is metG [H]
Identifier: 146340771
GI number: 146340771
Start: 3999416
End: 4001533
Strand: Direct
Name: metG [H]
Synonym: BRADO3829
Alternate gene names: 146340771
Gene position: 3999416-4001533 (Clockwise)
Preceding gene: 146340770
Following gene: 146340772
Centisome position: 53.64
GC content: 66.57
Gene sequence:
>2118_bases GTGGCCAAGGCCAGCAAGACAACCGTGAAGAAGGGCAAGCCGGCGACCAAGGGCGCCGCGACGAAGGCTGCCGCCAAGAA GGCTTCGAAGTCGCCCGCGAAGGCCAAAGCCGGCGCGACCAAGGCGAAGGCCGCGGCGGACAAGGACAAGAAGGCCAAGG CCGCCAAAGCCAATGCCGCCAAAGCCAAGGCCACGAAGGGCAAAGCGTCGTCCGCGCCGGCCAAGGGCAAGTCACCAAAG GCTGCCAAGAAGGCCGCGAAGTCGGCGACCAAGCCCGCTGTACCGGCCAAGAAGACTGCGGCCAAAGCCGCCGCCACGAA GCCCGCGCCATCGAAGAAGCCAGCCGAGACGAAGCCGGCGCCTGCTCCGAAGCTAGTTGCGCCAGCGGTCGCCGAAAGCC CGAAGCCGCCGCCGCGCGCCGCAAAGCCAAAGACCCCGCGCAAGCGGAAGGTCGAGGCTGCCGCGGCTCCGGAGATCGAG ATCGCCGAGATCGAAGTGGCTGAAGTCGAGATCGTCGAGATCGAGGCGACCGATACCGCGGAGGACGCGACGCCCGTCGC GGCCGCGACTGAAAACGCCAACACCTTCTACGTCACGACCGCGATCGCCTATCCCAATGGCAGCCCGCATATCGGCCACG CCTATGAGGCCATCGCGACCGATGCCATCGCGCGCTTCGCGCGGCTCGACGGCAAGGACGTGTTCTTCCTGACCGGCACC GACGAGCACGGCCTGAAGATGGTGCAGACCGCGCAGAACGAGGGCCTGACACCGTCGGAGCTCGCGGCCCGCAATGCCGG CCGCTTCCGCGAGATGGACGAGCGGCTGAACGTCTCGTTCGACCGCTTCATCCGCACCACCGAGCCCGCCCACCACAAAT CGGTGCAGGCGATCTGGACGCGCATGCTCGAGAACGGCGATATCTACGCCGACACCTATTCGGGCTGGTACTCGGTGCGC GACGAAGCGTACTACGCCGAGGAGGAGACGGTCGTCGGCGAGGACAATGTCCGCCGCGGGCCGCAGGGCACGCCGGTCGA GTGGGTCGAGGAGAAGAGCTACTTCTTCCGCCTGTCGGCCTATCAGGACAAGCTGCTCGCGCTGTACGAGAACCAGCCCG ATTTCATCGGGCCGGATGCGCGGCGCAACGAGATCACGAGCTTCGTCCGGGGCGGCCTGAAGGACCTCTCGATCTCGCGC ACGACGTTCGACTGGGGTGTCCGCGTGCCGCATGACGACGAGCACGTGATGTATGTCTGGGTCGACGCGCTGACCAACTA CATCACCGGCGTCGGCTTCCCCGATGAGAATGATGCGAACTGGAAGTTCTGGCCGGCCGACGTGCACGTCATCGGCAAGG ACATCATCCGATTCCACGCGGTGTACTGGCCGGCGTTCCTGATGTCGGCCGGCGTGCCGGTGCCGAAGCGGGTCTATGCC CACGGCTTCCTGTTCAACAGGGGCGAGAAGATGTCGAAGTCGGTCGGCAATGTGGTCGATCCGTTCAACCTCGCCGATCA GTACGGCGTGGACCAGCTGCGCTATTTCTTCCTGCGCGAGGTGCCGTTCGGCCAGGACGGCAACTACAATCACGAGGCGA TCGTCGCGCGCATCAACGCCGATCTCGCCAACGACCTCGGCAATCTCGCGCAGCGCTCGCTGTCGATGATCACCAAGCAG TTCGGCGGCGTGCTGCCGGAGCCCGGCGAGTTTTCGGCCAACGATCAAGCGATCCTGGCCGAGGCCGATGCGATGATCGG CGCGGCGCGCAAGGCGATGGCGACCCAGCAGATCCACCAATGGCTCAATGCCGTGTGGTCGGTGGTGGCCGAGGCCAACC GCTACTTTGCGGGCGAGGCGCCGTGGGCGCTGGCCAAGACCGATCCGAAGCGCCAGCACACCGTGCTCTATGTCACCGCC GAGGTGATCCGGCAGGTCGCGATCCTGACTCAGCCGGTGATGCCCGCCGCGTCGGCGAAGCTGCTCGACAGCCTGGGAAT CCCGGAGGACGAGCGGAGCTTCGCGCGGCTCGGCGGCGAGGTGCGGATCGCACCGGGCACGCAGCTGCCAGCGCCGCAGG CGGTGTTCCCGCGCTACATCGAGCCGAGCGCGGCGTGA
Upstream 100 bases:
>100_bases GTTCGGGATGCTCGCCGAAGCCACGCGGTAACGCGCCGACCATCATCCCGGGATCATCAGGATCAATCCGTCCACCGACG GCGTCAAAGAGGAATTTGCC
Downstream 100 bases:
>100_bases TGCTGGTCGACTCTCATTGCCATCTGGATTTTCCGGATTTTGCCGAGGATCTGGATGGCATCGTCACGCGCGCCGCCGCT GCCGGCGTCGGCCGCCTGGT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MAKASKTTVKKGKPATKGAATKAAAKKASKSPAKAKAGATKAKAAADKDKKAKAAKANAAKAKATKGKASSAPAKGKSPK AAKKAAKSATKPAVPAKKTAAKAAATKPAPSKKPAETKPAPAPKLVAPAVAESPKPPPRAAKPKTPRKRKVEAAAAPEIE IAEIEVAEVEIVEIEATDTAEDATPVAAATENANTFYVTTAIAYPNGSPHIGHAYEAIATDAIARFARLDGKDVFFLTGT DEHGLKMVQTAQNEGLTPSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWTRMLENGDIYADTYSGWYSVR DEAYYAEEETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDKLLALYENQPDFIGPDARRNEITSFVRGGLKDLSISR TTFDWGVRVPHDDEHVMYVWVDALTNYITGVGFPDENDANWKFWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYA HGFLFNRGEKMSKSVGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSLSMITKQ FGGVLPEPGEFSANDQAILAEADAMIGAARKAMATQQIHQWLNAVWSVVAEANRYFAGEAPWALAKTDPKRQHTVLYVTA EVIRQVAILTQPVMPAASAKLLDSLGIPEDERSFARLGGEVRIAPGTQLPAPQAVFPRYIEPSAA
Sequences:
>Translated_705_residues MAKASKTTVKKGKPATKGAATKAAAKKASKSPAKAKAGATKAKAAADKDKKAKAAKANAAKAKATKGKASSAPAKGKSPK AAKKAAKSATKPAVPAKKTAAKAAATKPAPSKKPAETKPAPAPKLVAPAVAESPKPPPRAAKPKTPRKRKVEAAAAPEIE IAEIEVAEVEIVEIEATDTAEDATPVAAATENANTFYVTTAIAYPNGSPHIGHAYEAIATDAIARFARLDGKDVFFLTGT DEHGLKMVQTAQNEGLTPSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWTRMLENGDIYADTYSGWYSVR DEAYYAEEETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDKLLALYENQPDFIGPDARRNEITSFVRGGLKDLSISR TTFDWGVRVPHDDEHVMYVWVDALTNYITGVGFPDENDANWKFWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYA HGFLFNRGEKMSKSVGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSLSMITKQ FGGVLPEPGEFSANDQAILAEADAMIGAARKAMATQQIHQWLNAVWSVVAEANRYFAGEAPWALAKTDPKRQHTVLYVTA EVIRQVAILTQPVMPAASAKLLDSLGIPEDERSFARLGGEVRIAPGTQLPAPQAVFPRYIEPSAA >Mature_704_residues AKASKTTVKKGKPATKGAATKAAAKKASKSPAKAKAGATKAKAAADKDKKAKAAKANAAKAKATKGKASSAPAKGKSPKA AKKAAKSATKPAVPAKKTAAKAAATKPAPSKKPAETKPAPAPKLVAPAVAESPKPPPRAAKPKTPRKRKVEAAAAPEIEI AEIEVAEVEIVEIEATDTAEDATPVAAATENANTFYVTTAIAYPNGSPHIGHAYEAIATDAIARFARLDGKDVFFLTGTD EHGLKMVQTAQNEGLTPSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWTRMLENGDIYADTYSGWYSVRD EAYYAEEETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSAYQDKLLALYENQPDFIGPDARRNEITSFVRGGLKDLSISRT TFDWGVRVPHDDEHVMYVWVDALTNYITGVGFPDENDANWKFWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYAH GFLFNRGEKMSKSVGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINADLANDLGNLAQRSLSMITKQF GGVLPEPGEFSANDQAILAEADAMIGAARKAMATQQIHQWLNAVWSVVAEANRYFAGEAPWALAKTDPKRQHTVLYVTAE VIRQVAILTQPVMPAASAKLLDSLGIPEDERSFARLGGEVRIAPGTQLPAPQAVFPRYIEPSAA
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=511, Percent_Identity=37.3776908023483, Blast_Score=334, Evalue=2e-91, Organism=Homo sapiens, GI14043022, Length=603, Percent_Identity=26.3681592039801, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI7661872, Length=200, Percent_Identity=27, Blast_Score=75, Evalue=3e-13, Organism=Escherichia coli, GI1788432, Length=510, Percent_Identity=26.8627450980392, Blast_Score=183, Evalue=3e-47, Organism=Escherichia coli, GI1786861, Length=178, Percent_Identity=26.9662921348315, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI212645096, Length=517, Percent_Identity=36.3636363636364, Blast_Score=327, Evalue=1e-89, Organism=Caenorhabditis elegans, GI71992781, Length=411, Percent_Identity=34.7931873479319, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17540794, Length=523, Percent_Identity=27.5334608030593, Blast_Score=171, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6321610, Length=535, Percent_Identity=32.8971962616822, Blast_Score=306, Evalue=5e-84, Organism=Saccharomyces cerevisiae, GI6321704, Length=536, Percent_Identity=24.4402985074627, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323414, Length=178, Percent_Identity=25.8426966292135, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21358483, Length=523, Percent_Identity=35.5640535372849, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI24655311, Length=517, Percent_Identity=25.531914893617, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI21355409, Length=179, Percent_Identity=29.608938547486, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 76417; Mature: 76286
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKASKTTVKKGKPATKGAATKAAAKKASKSPAKAKAGATKAKAAADKDKKAKAAKANAA CCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHCCCHHHHHHHHCCHH KAKATKGKASSAPAKGKSPKAAKKAAKSATKPAVPAKKTAAKAAATKPAPSKKPAETKPA HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC PAPKLVAPAVAESPKPPPRAAKPKTPRKRKVEAAAAPEIEIAEIEVAEVEIVEIEATDTA CCCCHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCC EDATPVAAATENANTFYVTTAIAYPNGSPHIGHAYEAIATDAIARFARLDGKDVFFLTGT CCCCCCEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC DEHGLKMVQTAQNEGLTPSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWT CCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH RMLENGDIYADTYSGWYSVRDEAYYAEEETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSA HHHHCCCEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEHH YQDKLLALYENQPDFIGPDARRNEITSFVRGGLKDLSISRTTFDWGVRVPHDDEHVMYVW HHHHHHHEECCCCCCCCCCCHHHHHHHHHHCCHHHCEEEEEEEECCCCCCCCCCCEEEEE VDALTNYITGVGFPDENDANWKFWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYA HHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH HGFLFNRGEKMSKSVGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINA HHHEECCCHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC DLANDLGNLAQRSLSMITKQFGGVLPEPGEFSANDQAILAEADAMIGAARKAMATQQIHQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH WLNAVWSVVAEANRYFAGEAPWALAKTDPKRQHTVLYVTAEVIRQVAILTQPVMPAASAK HHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHH LLDSLGIPEDERSFARLGGEVRIAPGTQLPAPQAVFPRYIEPSAA HHHHCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure AKASKTTVKKGKPATKGAATKAAAKKASKSPAKAKAGATKAKAAADKDKKAKAAKANAA CCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHCCCHHHHHHHHCCHH KAKATKGKASSAPAKGKSPKAAKKAAKSATKPAVPAKKTAAKAAATKPAPSKKPAETKPA HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC PAPKLVAPAVAESPKPPPRAAKPKTPRKRKVEAAAAPEIEIAEIEVAEVEIVEIEATDTA CCCCHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCCCC EDATPVAAATENANTFYVTTAIAYPNGSPHIGHAYEAIATDAIARFARLDGKDVFFLTGT CCCCCCEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC DEHGLKMVQTAQNEGLTPSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWT CCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH RMLENGDIYADTYSGWYSVRDEAYYAEEETVVGEDNVRRGPQGTPVEWVEEKSYFFRLSA HHHHCCCEEEECCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEHH YQDKLLALYENQPDFIGPDARRNEITSFVRGGLKDLSISRTTFDWGVRVPHDDEHVMYVW HHHHHHHEECCCCCCCCCCCHHHHHHHHHHCCHHHCEEEEEEEECCCCCCCCCCCEEEEE VDALTNYITGVGFPDENDANWKFWPADVHVIGKDIIRFHAVYWPAFLMSAGVPVPKRVYA HHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH HGFLFNRGEKMSKSVGNVVDPFNLADQYGVDQLRYFFLREVPFGQDGNYNHEAIVARINA HHHEECCCHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC DLANDLGNLAQRSLSMITKQFGGVLPEPGEFSANDQAILAEADAMIGAARKAMATQQIHQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH WLNAVWSVVAEANRYFAGEAPWALAKTDPKRQHTVLYVTAEVIRQVAILTQPVMPAASAK HHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHH LLDSLGIPEDERSFARLGGEVRIAPGTQLPAPQAVFPRYIEPSAA HHHHCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]