Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340760
Identifier: 146340760
GI number: 146340760
Start: 3986412
End: 3987776
Strand: Reverse
Name: 146340760
Synonym: BRADO3817
Alternate gene names: NA
Gene position: 3987776-3986412 (Counterclockwise)
Preceding gene: 146340765
Following gene: 146340759
Centisome position: 53.48
GC content: 63.44
Gene sequence:
>1365_bases TTGGCTCACCAGGGAGGGAACGCCATGTCACGGAGGAAGCTGAACCGCCGCCAATTCGTTGCCGCGACCGCTGCCACCTC GGCGGTCATGATCGCCGCGCCCTATGTGCGCGGTGCCTACGCCGCCGGCACCTTGACAATCGGACTGTGGGATCACTGGG TTCCCGGCGCCAACCAGGCTTCGACCGATCTCGTCAAGGAATGGGGAGCGAAGGAAAAGGTCGAGGTCACAATCGATTAC ATCACCAGCAACAACAAGAAGCTGGAACTGACGGTTGCGGCCGAGGCCCAGGCCAAATCGGGCCACGATATCCTGCAGAT GCCGACCTGGTGGCCGCACGCCTATGCGGATCAGCTCGAGCCTGTCAACGATGTGATGGAGCCGCTGATCAAGCAGAACG GCGACGTCAACGGCACAGTCAAGTATCTCGGCCAGGTCGGCGGCAAGTGGCTGGCCGTTCCGGCGACTCCGGGCAGTCAG ATCAAGGGGCCCTGCTCCCGGATCGATCTCATGAAGAAACTAGCCGGGATCGACGTACAGGAGATGTATCCGGCCGGCAG CCCGCCGAAAGCCGACAACTGGACCATGGAGACCTTCCTGAAGGCGGCGGAGGCCTGCCAGAAGGGCGGTTTCCCGTTCG GCATCGGGCTCGGCGAGACCACCGACAGCGTCGACACCGCGGGCGCCATCTTCCAGTCATTCGGTGCCGAGCTCGTGAAT GCCAAGGGCGACATTACGGTCAAGACCGACGCTGTCCGCCAGGCGCTCGAGTTCTACAAGAAGCTCATTGCCGTGCTGCC GCCCGACGCACCGTCCTGGGACGACGCGTCCAACAACAAATGGCTGATCTCCGGCAAGGGTGCGCTGATCATGAATCCGC CGAGCGCCTGGGCCGTCGCCAAGCGCGACGCCCCGCAGATCGCCGAGCAATGCTGGACCCACGGCTTCCCGGCCGGCCCG AAAGGACGCTTCGCGCCGTTCCTGCCGTACTTCTGGGGCGTCTGGAACTTCGGCAAGAACAAGCAGGCGGCCAAGAGTCT GCTCACTCATTTGTCGCAGCCGTCCTCGATCGAGAAGTTCGTCGCGGTCAGCGGCGGCTATGACCTGCCAGCCTACGCCA ACATGACGACCTTGAAGACCTGGGCCGAGCAAGGCCCGCCAACGGGTACGCTCTACCACTATCCAAACCCGTATAATCAT CAGACCCTCTCGATCGCAGCCTCGCCGGCACCGCCGAAGATCGCGCAGCAGATCTACTTCCAGGCGACGCTGACCAAGCT GGCGCTGCGCTTTGCGCAGGGCGAGAAGATGGACACCGCTCTCGCCTGGGCCGAGAGCGAGTGCGAAGGCTTCATGCGCA GCTGA
Upstream 100 bases:
>100_bases ACAGCCGCTCGCAATTCTGCTCTGATTACACCCAAGCGAAATCCATGCGCGCATGATGCGACGCAATAACTAACAAACAG GATTCGCCATCAACCAATGC
Downstream 100 bases:
>100_bases GGCGCATCTTTCTGACATGGGCGGTCCGCGGTCGCGGGCCGCCGCCGTCACGTTATTGCCATGGTCGCGCTTGTCCGCCG ACCAGGGGCTGGAAAGTCAC
Product: ABC transporter substrate-binding protein, periplasmic component
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein; Sugar ABC Transporter
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MAHQGGNAMSRRKLNRRQFVAATAATSAVMIAAPYVRGAYAAGTLTIGLWDHWVPGANQASTDLVKEWGAKEKVEVTIDY ITSNNKKLELTVAAEAQAKSGHDILQMPTWWPHAYADQLEPVNDVMEPLIKQNGDVNGTVKYLGQVGGKWLAVPATPGSQ IKGPCSRIDLMKKLAGIDVQEMYPAGSPPKADNWTMETFLKAAEACQKGGFPFGIGLGETTDSVDTAGAIFQSFGAELVN AKGDITVKTDAVRQALEFYKKLIAVLPPDAPSWDDASNNKWLISGKGALIMNPPSAWAVAKRDAPQIAEQCWTHGFPAGP KGRFAPFLPYFWGVWNFGKNKQAAKSLLTHLSQPSSIEKFVAVSGGYDLPAYANMTTLKTWAEQGPPTGTLYHYPNPYNH QTLSIAASPAPPKIAQQIYFQATLTKLALRFAQGEKMDTALAWAESECEGFMRS
Sequences:
>Translated_454_residues MAHQGGNAMSRRKLNRRQFVAATAATSAVMIAAPYVRGAYAAGTLTIGLWDHWVPGANQASTDLVKEWGAKEKVEVTIDY ITSNNKKLELTVAAEAQAKSGHDILQMPTWWPHAYADQLEPVNDVMEPLIKQNGDVNGTVKYLGQVGGKWLAVPATPGSQ IKGPCSRIDLMKKLAGIDVQEMYPAGSPPKADNWTMETFLKAAEACQKGGFPFGIGLGETTDSVDTAGAIFQSFGAELVN AKGDITVKTDAVRQALEFYKKLIAVLPPDAPSWDDASNNKWLISGKGALIMNPPSAWAVAKRDAPQIAEQCWTHGFPAGP KGRFAPFLPYFWGVWNFGKNKQAAKSLLTHLSQPSSIEKFVAVSGGYDLPAYANMTTLKTWAEQGPPTGTLYHYPNPYNH QTLSIAASPAPPKIAQQIYFQATLTKLALRFAQGEKMDTALAWAESECEGFMRS >Mature_453_residues AHQGGNAMSRRKLNRRQFVAATAATSAVMIAAPYVRGAYAAGTLTIGLWDHWVPGANQASTDLVKEWGAKEKVEVTIDYI TSNNKKLELTVAAEAQAKSGHDILQMPTWWPHAYADQLEPVNDVMEPLIKQNGDVNGTVKYLGQVGGKWLAVPATPGSQI KGPCSRIDLMKKLAGIDVQEMYPAGSPPKADNWTMETFLKAAEACQKGGFPFGIGLGETTDSVDTAGAIFQSFGAELVNA KGDITVKTDAVRQALEFYKKLIAVLPPDAPSWDDASNNKWLISGKGALIMNPPSAWAVAKRDAPQIAEQCWTHGFPAGPK GRFAPFLPYFWGVWNFGKNKQAAKSLLTHLSQPSSIEKFVAVSGGYDLPAYANMTTLKTWAEQGPPTGTLYHYPNPYNHQ TLSIAASPAPPKIAQQIYFQATLTKLALRFAQGEKMDTALAWAESECEGFMRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49233; Mature: 49102
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHQGGNAMSRRKLNRRQFVAATAATSAVMIAAPYVRGAYAAGTLTIGLWDHWVPGANQA CCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCHHCCCEECCEEEEECHHCCCCCCCCH STDLVKEWGAKEKVEVTIDYITSNNKKLELTVAAEAQAKSGHDILQMPTWWPHAYADQLE HHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEECCCCCCCHHHHHCC PVNDVMEPLIKQNGDVNGTVKYLGQVGGKWLAVPATPGSQIKGPCSRIDLMKKLAGIDVQ CHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHH EMYPAGSPPKADNWTMETFLKAAEACQKGGFPFGIGLGETTDSVDTAGAIFQSFGAELVN HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHCHHHHC AKGDITVKTDAVRQALEFYKKLIAVLPPDAPSWDDASNNKWLISGKGALIMNPPSAWAVA CCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCEEE KRDAPQIAEQCWTHGFPAGPKGRFAPFLPYFWGVWNFGKNKQAAKSLLTHLSQPSSIEKF CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH VAVSGGYDLPAYANMTTLKTWAEQGPPTGTLYHYPNPYNHQTLSIAASPAPPKIAQQIYF EEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHH QATLTKLALRFAQGEKMDTALAWAESECEGFMRS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHQGGNAMSRRKLNRRQFVAATAATSAVMIAAPYVRGAYAAGTLTIGLWDHWVPGANQA CCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCHHCCCEECCEEEEECHHCCCCCCCCH STDLVKEWGAKEKVEVTIDYITSNNKKLELTVAAEAQAKSGHDILQMPTWWPHAYADQLE HHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCEEECCCCCCCHHHHHCC PVNDVMEPLIKQNGDVNGTVKYLGQVGGKWLAVPATPGSQIKGPCSRIDLMKKLAGIDVQ CHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCHH EMYPAGSPPKADNWTMETFLKAAEACQKGGFPFGIGLGETTDSVDTAGAIFQSFGAELVN HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHCHHHHC AKGDITVKTDAVRQALEFYKKLIAVLPPDAPSWDDASNNKWLISGKGALIMNPPSAWAVA CCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCEEE KRDAPQIAEQCWTHGFPAGPKGRFAPFLPYFWGVWNFGKNKQAAKSLLTHLSQPSSIEKF CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHH VAVSGGYDLPAYANMTTLKTWAEQGPPTGTLYHYPNPYNHQTLSIAASPAPPKIAQQIYF EEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHH QATLTKLALRFAQGEKMDTALAWAESECEGFMRS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA