Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is malF [C]
Identifier: 146340759
GI number: 146340759
Start: 3985360
End: 3986298
Strand: Reverse
Name: malF [C]
Synonym: BRADO3816
Alternate gene names: 146340759
Gene position: 3986298-3985360 (Counterclockwise)
Preceding gene: 146340760
Following gene: 146340758
Centisome position: 53.46
GC content: 61.02
Gene sequence:
>939_bases ATGGTTGATGCCGCAATCGGCGAGAACGCCGCCGCACGGCCGCGCCCCATCGCCCGCCGCAAGGGCCTGCGCAATGCGCT CAAGCGCAAGTCGACGGTGGCGTTCCTGATGACCCTGCCGCTGATCCTTCTGATCGCCGTCCTCGTGCTCTACCCCGCCT TCTACTCGATTCATCTGGCGACGCTGAACAAGTCGATGCAGCGCTTCGTCGGCTTCGGCAACTTCACCTTCCTTTTCAAG CGCGAGACGTTCTGGATGGTGGTGAAGCAGTCCTGCATCTTCGCGATTACAGCCGTCATCTTCAAAGCCTTGATGGGCTT CATCGTCGCGCATTTCGTGCACAACATTCCTGCCAAGGGGCAGCGCAAATGGCGCGGCATCCTGCTCGTGCCCTGGGTCA TTCCGCCCGCGATGAGCACGCTGGCCTGGCTGTGGCTATTCGATCCGTCGTACAGCGCGTTCAACTATACGCTCTCCTTC TTCGGCATCGGACCGATCCCCTGGCTCGGCGAAACCGCCTGGGCGCGGTTCTCGGTCATCCTGGTCAACGTCTGGTACGG CGCGCCGTTCTTCATGATCATGTATCTGGCGGCGCTGAAATCGGTCCCCGACCAGCTCTACGAGGCGGCCGCGATCGACG GCGCCAATTGGTGGCAGCGGATCTGGTACGTGACCCTGCCGATGATGCGAAACATCATCGCGATCACCACGCTGTTCTCG CTGATCGTCACCTTCGCCAATTTCGACATCGTCCGCATCCTGACATCCGGCGGCCCGCTGGATACGACGCATCTGTTTGC GACATGGGCGTTCCAGGTCGGCATTCAGAGCAGCGATATTCCGCTCGGCGCAAGCGTGTCGCTGTTCATGGTGCCGATCC TGGCGGTCGCCGCCATCTTCATCCTGCGTGACGTATCCAAGCGGGGAAATGAATCCTGA
Upstream 100 bases:
>100_bases GACATGGGCGGTCCGCGGTCGCGGGCCGCCGCCGTCACGTTATTGCCATGGTCGCGCTTGTCCGCCGACCAGGGGCTGGA AAGTCACGAGGAGCCCGCTC
Downstream 100 bases:
>100_bases TGAGCACCCTGACCGTCGACAAGGCCGGCCCGACCCGCACCGTCAAGCACGGCTCGATGAGCCGCGACCGCGCCTGGGCG CTGCGCTGGTCGTATTTCTT
Product: putative permease of sugar ABC transporter
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLATLNKSMQRFVGFGNFTFLFK RETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKGQRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSF FGIGPIPWLGETAWARFSVILVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIFILRDVSKRGNES
Sequences:
>Translated_312_residues MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLATLNKSMQRFVGFGNFTFLFK RETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKGQRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSF FGIGPIPWLGETAWARFSVILVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIFILRDVSKRGNES >Mature_312_residues MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLATLNKSMQRFVGFGNFTFLFK RETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKGQRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSF FGIGPIPWLGETAWARFSVILVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIFILRDVSKRGNES
Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=250, Percent_Identity=30, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1789861, Length=299, Percent_Identity=26.4214046822742, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=25.0980392156863, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35081; Mature: 35081
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLNKSMQRFVGFGNFTFLFKRETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKG HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSFFGIGPIPWLGETAWARFSVI CCCCCCEEEECCCCCHHHHHHHHHHEECCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHH LVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS EEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIF HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILRDVSKRGNES HHHHHHHCCCCC >Mature Secondary Structure MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLNKSMQRFVGFGNFTFLFKRETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKG HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSFFGIGPIPWLGETAWARFSVI CCCCCCEEEECCCCCHHHHHHHHHHEECCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHH LVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS EEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIF HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH ILRDVSKRGNES HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]