Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is malF [C]

Identifier: 146340759

GI number: 146340759

Start: 3985360

End: 3986298

Strand: Reverse

Name: malF [C]

Synonym: BRADO3816

Alternate gene names: 146340759

Gene position: 3986298-3985360 (Counterclockwise)

Preceding gene: 146340760

Following gene: 146340758

Centisome position: 53.46

GC content: 61.02

Gene sequence:

>939_bases
ATGGTTGATGCCGCAATCGGCGAGAACGCCGCCGCACGGCCGCGCCCCATCGCCCGCCGCAAGGGCCTGCGCAATGCGCT
CAAGCGCAAGTCGACGGTGGCGTTCCTGATGACCCTGCCGCTGATCCTTCTGATCGCCGTCCTCGTGCTCTACCCCGCCT
TCTACTCGATTCATCTGGCGACGCTGAACAAGTCGATGCAGCGCTTCGTCGGCTTCGGCAACTTCACCTTCCTTTTCAAG
CGCGAGACGTTCTGGATGGTGGTGAAGCAGTCCTGCATCTTCGCGATTACAGCCGTCATCTTCAAAGCCTTGATGGGCTT
CATCGTCGCGCATTTCGTGCACAACATTCCTGCCAAGGGGCAGCGCAAATGGCGCGGCATCCTGCTCGTGCCCTGGGTCA
TTCCGCCCGCGATGAGCACGCTGGCCTGGCTGTGGCTATTCGATCCGTCGTACAGCGCGTTCAACTATACGCTCTCCTTC
TTCGGCATCGGACCGATCCCCTGGCTCGGCGAAACCGCCTGGGCGCGGTTCTCGGTCATCCTGGTCAACGTCTGGTACGG
CGCGCCGTTCTTCATGATCATGTATCTGGCGGCGCTGAAATCGGTCCCCGACCAGCTCTACGAGGCGGCCGCGATCGACG
GCGCCAATTGGTGGCAGCGGATCTGGTACGTGACCCTGCCGATGATGCGAAACATCATCGCGATCACCACGCTGTTCTCG
CTGATCGTCACCTTCGCCAATTTCGACATCGTCCGCATCCTGACATCCGGCGGCCCGCTGGATACGACGCATCTGTTTGC
GACATGGGCGTTCCAGGTCGGCATTCAGAGCAGCGATATTCCGCTCGGCGCAAGCGTGTCGCTGTTCATGGTGCCGATCC
TGGCGGTCGCCGCCATCTTCATCCTGCGTGACGTATCCAAGCGGGGAAATGAATCCTGA

Upstream 100 bases:

>100_bases
GACATGGGCGGTCCGCGGTCGCGGGCCGCCGCCGTCACGTTATTGCCATGGTCGCGCTTGTCCGCCGACCAGGGGCTGGA
AAGTCACGAGGAGCCCGCTC

Downstream 100 bases:

>100_bases
TGAGCACCCTGACCGTCGACAAGGCCGGCCCGACCCGCACCGTCAAGCACGGCTCGATGAGCCGCGACCGCGCCTGGGCG
CTGCGCTGGTCGTATTTCTT

Product: putative permease of sugar ABC transporter

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLATLNKSMQRFVGFGNFTFLFK
RETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKGQRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSF
FGIGPIPWLGETAWARFSVILVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS
LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIFILRDVSKRGNES

Sequences:

>Translated_312_residues
MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLATLNKSMQRFVGFGNFTFLFK
RETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKGQRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSF
FGIGPIPWLGETAWARFSVILVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS
LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIFILRDVSKRGNES
>Mature_312_residues
MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLATLNKSMQRFVGFGNFTFLFK
RETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKGQRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSF
FGIGPIPWLGETAWARFSVILVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS
LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIFILRDVSKRGNES

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790465, Length=250, Percent_Identity=30, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1789861, Length=299, Percent_Identity=26.4214046822742, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=25.0980392156863, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35081; Mature: 35081

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLNKSMQRFVGFGNFTFLFKRETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKG
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSFFGIGPIPWLGETAWARFSVI
CCCCCCEEEECCCCCHHHHHHHHHHEECCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHH
LVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS
EEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIF
HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ILRDVSKRGNES
HHHHHHHCCCCC
>Mature Secondary Structure
MVDAAIGENAAARPRPIARRKGLRNALKRKSTVAFLMTLPLILLIAVLVLYPAFYSIHLA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLNKSMQRFVGFGNFTFLFKRETFWMVVKQSCIFAITAVIFKALMGFIVAHFVHNIPAKG
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QRKWRGILLVPWVIPPAMSTLAWLWLFDPSYSAFNYTLSFFGIGPIPWLGETAWARFSVI
CCCCCCEEEECCCCCHHHHHHHHHHEECCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHH
LVNVWYGAPFFMIMYLAALKSVPDQLYEAAAIDGANWWQRIWYVTLPMMRNIIAITTLFS
EEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVTFANFDIVRILTSGGPLDTTHLFATWAFQVGIQSSDIPLGASVSLFMVPILAVAAIF
HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ILRDVSKRGNES
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]