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The map label for this gene is ycjP [H]

Identifier: 146340758

GI number: 146340758

Start: 3984449

End: 3985360

Strand: Reverse

Name: ycjP [H]

Synonym: BRADO3815

Alternate gene names: 146340758

Gene position: 3985360-3984449 (Counterclockwise)

Preceding gene: 146340759

Following gene: 146340757

Centisome position: 53.45

GC content: 61.84

Gene sequence:

>912_bases
ATGAGCACCCTGACCGTCGACAAGGCCGGCCCGACCCGCACCGTCAAGCACGGCTCGATGAGCCGCGACCGCGCCTGGGC
GCTGCGCTGGTCGTATTTCTTCCTGGTGCTGTTCGCGATCTTCTCGCTGGTGCCGCCGTTCTATATGCTGATCACGTCGC
TGAAGAGCAGCGCCGAGATTTCGGCCGCGACCAATCCGTGGTGGGTGTTCCATCCCACGCTGTCCAACTATGTCGAGCTG
CTCAGCTCGAACCAGTTCCTGCGCTTCTTCTGGAACTCGGCCATGGTGTCGGTCATCGTCGTCATCGTCACGATGCTGAT
CAGCATTCCTGCAGCCTTCGCGCTGGCACGCATGAAGTTCTGGGGATCGGCGACGCTGGCCACCGGCGTGTTCCTGACCT
ATCTCATTCCCGACAGCCTGCTGTTCATTCCGCTGTTCAAGATGCTCGCGGTGGTCCAGGACCTGACCGGGATCACTTTG
CTCAACAGATGGTACGTGCTGCTGTTCATCTATCCGACGCTGACGGTGCCGTTCTGCACCTGGATCATGATCGGCTATTT
CGCCTCGATTCCGAAGGAACTCGACGAGGCCGCGATCATCGACGGCGCCTCCTGGCTGCAGACGTTGACGCGGATCTTCA
TCCCCGTCGCCCTGCCCGGTCTGATCGCGGCAACCATCTTCGCCTTCACGGTGTCCTGGGCGCAGTTTCTCTATCCGCTG
GTGCTGACGACGTCCGTCGACCAGCTGGTGCTGCCGGTCGGCATCACCACCACCCTGATCAAGGGGGACGTCTTCAATTG
GGGGCAGATCATGACCGGCGCGCTGCTCGGCGCGGCGCCGCCGCTGATCATCTACGCATTCCTGATGGACTATTACATCG
CCGGTCTCACCGCCGGCGCGACCAAGGGCTGA

Upstream 100 bases:

>100_bases
TTCCGCTCGGCGCAAGCGTGTCGCTGTTCATGGTGCCGATCCTGGCGGTCGCCGCCATCTTCATCCTGCGTGACGTATCC
AAGCGGGGAAATGAATCCTG

Downstream 100 bases:

>100_bases
TGACGGGGGTTGATCCGATATGGCTGAAGTGAGCTTGCGCAAGGTCGTGAAACGCTACGACGACGTCGAGGCCGTCCGCG
GCATCGATCTCGACATCGCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSTLTVDKAGPTRTVKHGSMSRDRAWALRWSYFFLVLFAIFSLVPPFYMLITSLKSSAEISAATNPWWVFHPTLSNYVEL
LSSNQFLRFFWNSAMVSVIVVIVTMLISIPAAFALARMKFWGSATLATGVFLTYLIPDSLLFIPLFKMLAVVQDLTGITL
LNRWYVLLFIYPTLTVPFCTWIMIGYFASIPKELDEAAIIDGASWLQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL
VLTTSVDQLVLPVGITTTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGATKG

Sequences:

>Translated_303_residues
MSTLTVDKAGPTRTVKHGSMSRDRAWALRWSYFFLVLFAIFSLVPPFYMLITSLKSSAEISAATNPWWVFHPTLSNYVEL
LSSNQFLRFFWNSAMVSVIVVIVTMLISIPAAFALARMKFWGSATLATGVFLTYLIPDSLLFIPLFKMLAVVQDLTGITL
LNRWYVLLFIYPTLTVPFCTWIMIGYFASIPKELDEAAIIDGASWLQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL
VLTTSVDQLVLPVGITTTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGATKG
>Mature_302_residues
STLTVDKAGPTRTVKHGSMSRDRAWALRWSYFFLVLFAIFSLVPPFYMLITSLKSSAEISAATNPWWVFHPTLSNYVELL
SSNQFLRFFWNSAMVSVIVVIVTMLISIPAAFALARMKFWGSATLATGVFLTYLIPDSLLFIPLFKMLAVVQDLTGITLL
NRWYVLLFIYPTLTVPFCTWIMIGYFASIPKELDEAAIIDGASWLQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPLV
LTTSVDQLVLPVGITTTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGATKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=33.0960854092527, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=29.0322580645161, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789860, Length=219, Percent_Identity=26.9406392694064, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33618; Mature: 33487

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure 
STLTVDKAGPTRTVKHGSMSRDRAWALRWSYFFLVLFAIFSLVPPFYMLITSLKSSAEI
CCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]