Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is yoaE [H]
Identifier: 146340729
GI number: 146340729
Start: 3953669
End: 3954394
Strand: Direct
Name: yoaE [H]
Synonym: BRADO3782
Alternate gene names: 146340729
Gene position: 3953669-3954394 (Clockwise)
Preceding gene: 146340728
Following gene: 146340730
Centisome position: 53.02
GC content: 64.46
Gene sequence:
>726_bases ATGATCGACCTTCTCACCAGTCCCGAAGCCTGGGCGGCTTTGCTGACGCTGACCGCGCTGGAAATCGTTCTCGGCATCGA CAACGTCATCTTCCTGTCGGTGATCACCGCGCGCATCCCCGAGCCGCAGTCGACGCGCGCCCGGCAGATCGGGCTGGCGC TGGCGCTGATCTTCCGCATCATGCTGCTCAGCGTGCTGGTCTGGCTGATCGGCCTCACCCAGCCGGTATTCTCGATCGGC AAGCTCGGCTTCTCCTGGCGCGACATCATCCTGATCGGCGGCGGCCTGTTCCTGATCGCCAAGGCGACGCACGAGATCCA CGCCGAGGTCGAGGCCCGGGAGGAGGAGGGGCCGCAGGCCGGCGGGCGCAGCAGCTTCTTCTGGGTGATCGCACAGATCA TCGTCATCGATCTCGTGTTTTCGCTCGACTCGATCATCACGGCGATCGGCATGGCGCAGGATCTCGAGATCATGATCGCG GCGGTGATCATCGCGGTCGTGATCATGTACGTTTCGTCCGGGCCGGTCGCGCGCTTCGTCGCCAATCATCCGACCACCAA GATGCTGGCGCTTGCCTTCCTGGTGCTGATCGGCGTCGCGCTGGTGGCCGACGGCTTCGAGTTCCACATCCCGCGCGGCT ACATCTACTTCGCAATCGCCTTCGCACTCGCGGTCGAGGCCTTCAACGTCATGGCCTCGCGCAACCGCAGGAAGCGCCGA GGCTGA
Upstream 100 bases:
>100_bases ACTTCATTGTGCACCCGGCCGTGACGGTCCTGCTGTGCGCGATCGGCCTTTACATCGTCGCGAGCGACTCCGCGATCCGC CTGTTGAGATCCTTGAAAGC
Downstream 100 bases:
>100_bases GACTGAGGCTGAGGCCGAGATGCCGCCGGGCCGAGTTGACAAGGCTCGCTTGATCGCCTTGGCTTGACGCGCCGGCCGGC CGAAAGCGCGCGCCGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIDLLTSPEAWAALLTLTALEIVLGIDNVIFLSVITARIPEPQSTRARQIGLALALIFRIMLLSVLVWLIGLTQPVFSIG KLGFSWRDIILIGGGLFLIAKATHEIHAEVEAREEEGPQAGGRSSFFWVIAQIIVIDLVFSLDSIITAIGMAQDLEIMIA AVIIAVVIMYVSSGPVARFVANHPTTKMLALAFLVLIGVALVADGFEFHIPRGYIYFAIAFALAVEAFNVMASRNRRKRR G
Sequences:
>Translated_241_residues MIDLLTSPEAWAALLTLTALEIVLGIDNVIFLSVITARIPEPQSTRARQIGLALALIFRIMLLSVLVWLIGLTQPVFSIG KLGFSWRDIILIGGGLFLIAKATHEIHAEVEAREEEGPQAGGRSSFFWVIAQIIVIDLVFSLDSIITAIGMAQDLEIMIA AVIIAVVIMYVSSGPVARFVANHPTTKMLALAFLVLIGVALVADGFEFHIPRGYIYFAIAFALAVEAFNVMASRNRRKRR G >Mature_241_residues MIDLLTSPEAWAALLTLTALEIVLGIDNVIFLSVITARIPEPQSTRARQIGLALALIFRIMLLSVLVWLIGLTQPVFSIG KLGFSWRDIILIGGGLFLIAKATHEIHAEVEAREEEGPQAGGRSSFFWVIAQIIVIDLVFSLDSIITAIGMAQDLEIMIA AVIIAVVIMYVSSGPVARFVANHPTTKMLALAFLVLIGVALVADGFEFHIPRGYIYFAIAFALAVEAFNVMASRNRRKRR G
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Escherichia coli, GI1788119, Length=234, Percent_Identity=48.2905982905983, Blast_Score=245, Evalue=2e-66, Organism=Escherichia coli, GI87082033, Length=234, Percent_Identity=45.7264957264957, Blast_Score=211, Evalue=4e-56, Organism=Escherichia coli, GI1789197, Length=234, Percent_Identity=50, Blast_Score=209, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR000644 - InterPro: IPR005496 - InterPro: IPR005170 [H]
Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 26285; Mature: 26285
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLLTSPEAWAALLTLTALEIVLGIDNVIFLSVITARIPEPQSTRARQIGLALALIFRI CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MLLSVLVWLIGLTQPVFSIGKLGFSWRDIILIGGGLFLIAKATHEIHAEVEAREEEGPQA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCHHEEEHHHHHHHHHHHHHHHCCCCC GGRSSFFWVIAQIIVIDLVFSLDSIITAIGMAQDLEIMIAAVIIAVVIMYVSSGPVARFV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ANHPTTKMLALAFLVLIGVALVADGFEFHIPRGYIYFAIAFALAVEAFNVMASRNRRKRR HCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC G C >Mature Secondary Structure MIDLLTSPEAWAALLTLTALEIVLGIDNVIFLSVITARIPEPQSTRARQIGLALALIFRI CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MLLSVLVWLIGLTQPVFSIGKLGFSWRDIILIGGGLFLIAKATHEIHAEVEAREEEGPQA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCHHEEEHHHHHHHHHHHHHHHCCCCC GGRSSFFWVIAQIIVIDLVFSLDSIITAIGMAQDLEIMIAAVIIAVVIMYVSSGPVARFV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ANHPTTKMLALAFLVLIGVALVADGFEFHIPRGYIYFAIAFALAVEAFNVMASRNRRKRR HCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]