Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is qor [H]
Identifier: 146340730
GI number: 146340730
Start: 3954624
End: 3955571
Strand: Direct
Name: qor [H]
Synonym: BRADO3783
Alternate gene names: 146340730
Gene position: 3954624-3955571 (Clockwise)
Preceding gene: 146340729
Following gene: 146340733
Centisome position: 53.04
GC content: 66.14
Gene sequence:
>948_bases GTGGGTGGGCCGGAGGCGCTCGTCTACGAGCCGGTCGATCTGGCCGCCCCCGGGCCGGGCGAGGTCCGCATCCGCCAGCA TGCGATCGGCCTGAACTTCATCGACGTGTATTATCGCACCGGCCTGTACAAGGCGCCTGGTCTTCCATTCGTGGCCGGCA ACGAGGCGGCGGGCGAGGTGATCGCGGTCGGCCCCGGCGTGACGCACTTCCATCCCAGCGACCGCGTCGCCTACTACGAA AATCTGGGCGGCTACGCCACCGAGCGCAACATCGGCTGGCAGCGCCTGGTCAAGCTGCCCGACCACATCACCTATGAACA GGGCGCCGTGCTGATGCTCAAGGGGTTGACCGTGTGGTACCTGCTGCACAAGACCTTCAAGGTCGAACCGCATCATCGTG TACTGATCCACGCCGCCGCCGGCGGCATCGGCCTCTTGGCCTGCCAATGGGCGCGCGCGCTCGGCGCGCATGTGATCGGC ACCGTCGGCTCCAAGGCCAAGGCCGATCTCGCGCTCGCCAATGGCTGCGATCACGTCATCCTCTACAATGAAGAGGATTT CGTCGCGCGGGTGAAGCAGATCAGCCGCGGGGAAGGATGCGACGTGGTCTATGACGGCGTCGGCAAGTCGACCTTCCCGG GATCGCTGTCCTGCCTCAAGCCGCGCGGCCTGTTCGTCAGCTTCGGCAACGCCTCGGGTCCGGTACCACCATTCTCGATC GCCGAGTTGAACAGCCACGGCTCGCTGTTCGCGACCCGGCCGAAGCTCAACGACTATGTCGGCAAGCGCTCGGAACTGCT GGAAGGCGCGGACACGCTGTTCTCCGCGGTGATCAGCGGCAAGCTACACGTGCCGATCAATCACGCCTACGCGCTGAAGG ACGCCGCGCGCGCCCATGCCGATCTCGAGAGCCGCGCCACCACGGGCGCGTCGATCCTGAAGCCGTGA
Upstream 100 bases:
>100_bases AGGTAATTATCAAAGCTTCTTGCGCCGGATTCTCAGATGCGGCCGGGAGGGAGTCCGAAGGGGAGATCGCGGGATGGCCA AGGCGGTGCGCGTGCACAAG
Downstream 100 bases:
>100_bases TGCGCGAGGCCGTGGCTCAAGCCTCGTCGCGGAGGGCGGCCTCGTCGCCGGCCGCCCGGCTCCAGAACACCTGATCCGTC TGGGCCGCCATGGCCGGCTC
Product: quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGGPEALVYEPVDLAAPGPGEVRIRQHAIGLNFIDVYYRTGLYKAPGLPFVAGNEAAGEVIAVGPGVTHFHPSDRVAYYE NLGGYATERNIGWQRLVKLPDHITYEQGAVLMLKGLTVWYLLHKTFKVEPHHRVLIHAAAGGIGLLACQWARALGAHVIG TVGSKAKADLALANGCDHVILYNEEDFVARVKQISRGEGCDVVYDGVGKSTFPGSLSCLKPRGLFVSFGNASGPVPPFSI AELNSHGSLFATRPKLNDYVGKRSELLEGADTLFSAVISGKLHVPINHAYALKDAARAHADLESRATTGASILKP
Sequences:
>Translated_315_residues MGGPEALVYEPVDLAAPGPGEVRIRQHAIGLNFIDVYYRTGLYKAPGLPFVAGNEAAGEVIAVGPGVTHFHPSDRVAYYE NLGGYATERNIGWQRLVKLPDHITYEQGAVLMLKGLTVWYLLHKTFKVEPHHRVLIHAAAGGIGLLACQWARALGAHVIG TVGSKAKADLALANGCDHVILYNEEDFVARVKQISRGEGCDVVYDGVGKSTFPGSLSCLKPRGLFVSFGNASGPVPPFSI AELNSHGSLFATRPKLNDYVGKRSELLEGADTLFSAVISGKLHVPINHAYALKDAARAHADLESRATTGASILKP >Mature_314_residues GGPEALVYEPVDLAAPGPGEVRIRQHAIGLNFIDVYYRTGLYKAPGLPFVAGNEAAGEVIAVGPGVTHFHPSDRVAYYEN LGGYATERNIGWQRLVKLPDHITYEQGAVLMLKGLTVWYLLHKTFKVEPHHRVLIHAAAGGIGLLACQWARALGAHVIGT VGSKAKADLALANGCDHVILYNEEDFVARVKQISRGEGCDVVYDGVGKSTFPGSLSCLKPRGLFVSFGNASGPVPPFSIA ELNSHGSLFATRPKLNDYVGKRSELLEGADTLFSAVISGKLHVPINHAYALKDAARAHADLESRATTGASILKP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI18379349, Length=318, Percent_Identity=29.874213836478, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI194239674, Length=318, Percent_Identity=29.2452830188679, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI13236495, Length=318, Percent_Identity=29.2452830188679, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI194239676, Length=202, Percent_Identity=35.6435643564356, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI22538446, Length=325, Percent_Identity=30.1538461538462, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI22538444, Length=325, Percent_Identity=30.1538461538462, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI24308257, Length=220, Percent_Identity=30, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI28557745, Length=225, Percent_Identity=31.1111111111111, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI67078404, Length=263, Percent_Identity=27.7566539923954, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI67078406, Length=233, Percent_Identity=27.4678111587983, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI47519420, Length=215, Percent_Identity=28.3720930232558, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI197927207, Length=187, Percent_Identity=26.2032085561497, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1790485, Length=317, Percent_Identity=50.788643533123, Blast_Score=303, Evalue=1e-83, Organism=Caenorhabditis elegans, GI17507255, Length=304, Percent_Identity=25.3289473684211, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17556000, Length=254, Percent_Identity=27.5590551181102, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=318, Percent_Identity=36.7924528301887, Blast_Score=193, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6319621, Length=341, Percent_Identity=22.5806451612903, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 33668; Mature: 33537
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGPEALVYEPVDLAAPGPGEVRIRQHAIGLNFIDVYYRTGLYKAPGLPFVAGNEAAGEV CCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHEEEHHHCCCCCCCCCCEEECCCCCCCE IAVGPGVTHFHPSDRVAYYENLGGYATERNIGWQRLVKLPDHITYEQGAVLMLKGLTVWY EEECCCCCEECCCCCEEEECCCCCEEECCCCCHHHHHHCCCCCEECCCCEEEEHHHHHHH LLHKTFKVEPHHRVLIHAAAGGIGLLACQWARALGAHVIGTVGSKAKADLALANGCDHVI HHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCEEE LYNEEDFVARVKQISRGEGCDVVYDGVGKSTFPGSLSCLKPRGLFVSFGNASGPVPPFSI EECCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCEE AELNSHGSLFATRPKLNDYVGKRSELLEGADTLFSAVISGKLHVPINHAYALKDAARAHA EEECCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH DLESRATTGASILKP HHHHHCCCCCHHCCC >Mature Secondary Structure GGPEALVYEPVDLAAPGPGEVRIRQHAIGLNFIDVYYRTGLYKAPGLPFVAGNEAAGEV CCCCEEEECCCCCCCCCCCCEEEEEEECCCHHEEEHHHCCCCCCCCCCEEECCCCCCCE IAVGPGVTHFHPSDRVAYYENLGGYATERNIGWQRLVKLPDHITYEQGAVLMLKGLTVWY EEECCCCCEECCCCCEEEECCCCCEEECCCCCHHHHHHCCCCCEECCCCEEEEHHHHHHH LLHKTFKVEPHHRVLIHAAAGGIGLLACQWARALGAHVIGTVGSKAKADLALANGCDHVI HHHHHEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCEEE LYNEEDFVARVKQISRGEGCDVVYDGVGKSTFPGSLSCLKPRGLFVSFGNASGPVPPFSI EECCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCEE AELNSHGSLFATRPKLNDYVGKRSELLEGADTLFSAVISGKLHVPINHAYALKDAARAHA EEECCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH DLESRATTGASILKP HHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]