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The map label for this gene is mdcF [H]

Identifier: 146340726

GI number: 146340726

Start: 3950644

End: 3951597

Strand: Direct

Name: mdcF [H]

Synonym: BRADO3779

Alternate gene names: 146340726

Gene position: 3950644-3951597 (Clockwise)

Preceding gene: 146340724

Following gene: 146340728

Centisome position: 52.98

GC content: 66.46

Gene sequence:

>954_bases
ATGTTCGACATTCTCAATCTCGCCCTGCCGTATTTCGGCGTCGTTTTCATAGGGTTCGCCTGCGGTAAATGGAAGGGGCT
GCCGGAGTCCGGACTGTCCTGGATGAACTTCTTCCTGCTCTACGTGTCGCTGCCTGCCTTGATGTTCAACCTCATCGCAC
GCACGCCATTCGCGGAACTGAGCAACCCTCCCTTCCTGGTTGCAACGACGCTTGCGACCATGCTCACCTTCACGCTGGCG
CTGGTGCTGGGCAAGCTGATCGGCCGGCTGTCGCTGCGCGAGGCGACGATGGCCGGGCTCGCCGGCGGCTACGGCAATAT
CGGCTATATGGGGCCGGGGCTGGCGCTCGCCGTGCTCGGGCCGAAGGCCGCCGCGCCCACAGCGCTGATCTTCTGCTGCG
ACAGCATCTTCCTGTTCTCGATCGTGCCGCTGCTGGTGGAGCTCACCGAACGCGACCATGCCTCGTTGGGGCATGCCGTG
CGCACCGTGCTGCAGCAGATCCTGCGGAACCCGCTGATCATGGCGACCGCGGCGGGCATCCTCGCGGCGGCATTGCAGCT
GCATCCGCCGACCGTGATCGATCGCACCCTGCAGTTCCTGCAGAACGCCGCGGCGCCGACGGCGCTGTTCGCGCTGGGCG
TGACGGTGGCGCTTCGCCCGTTCGAGCGGCTGCCTTGGGAGGTGCCGGTGCTCACGGTCGTGAAGCTCGTGATTCACCCG
CTGGTATCGTTGGCCCTGATGCTGCTGTTCGGGCCGTTCGCGCAGCCCTGGGCCGCGACCGCGGTGCTGATGGCGGCGCT
GCCGCCCGCGCTCAACGTGTTCGTGATCGCGCGCCAGCACGACAGCTGGATCGAGCCGGCGTCATCGGCAGTGCTGATCG
GCACCTTCGCTTCCGTCCTGACACTCACGACGGCGATGTGGCTGATCCAGAGCGGCCGGCTGGCGTTCCCGTAG

Upstream 100 bases:

>100_bases
ATTGAGGCCGATGCTAGTGCCCGGGCGGCGGATTTAATCTGGACACCGCCTGATTCGCGCCCCGCATTCCAAGGCCCCCG
ACGGGCCTCCGCAAAGACCC

Downstream 100 bases:

>100_bases
TCCGCTCTCAGCCGGCCTTGCGGGACGTGCGCCAGGACGGCGCCAGACCCTCACGCATCGCCAGCCGCCGCAGCGGCCCG
ATGCCGCCGATCAGATGCAT

Product: putative malonate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MFDILNLALPYFGVVFIGFACGKWKGLPESGLSWMNFFLLYVSLPALMFNLIARTPFAELSNPPFLVATTLATMLTFTLA
LVLGKLIGRLSLREATMAGLAGGYGNIGYMGPGLALAVLGPKAAAPTALIFCCDSIFLFSIVPLLVELTERDHASLGHAV
RTVLQQILRNPLIMATAAGILAAALQLHPPTVIDRTLQFLQNAAAPTALFALGVTVALRPFERLPWEVPVLTVVKLVIHP
LVSLALMLLFGPFAQPWAATAVLMAALPPALNVFVIARQHDSWIEPASSAVLIGTFASVLTLTTAMWLIQSGRLAFP

Sequences:

>Translated_317_residues
MFDILNLALPYFGVVFIGFACGKWKGLPESGLSWMNFFLLYVSLPALMFNLIARTPFAELSNPPFLVATTLATMLTFTLA
LVLGKLIGRLSLREATMAGLAGGYGNIGYMGPGLALAVLGPKAAAPTALIFCCDSIFLFSIVPLLVELTERDHASLGHAV
RTVLQQILRNPLIMATAAGILAAALQLHPPTVIDRTLQFLQNAAAPTALFALGVTVALRPFERLPWEVPVLTVVKLVIHP
LVSLALMLLFGPFAQPWAATAVLMAALPPALNVFVIARQHDSWIEPASSAVLIGTFASVLTLTTAMWLIQSGRLAFP
>Mature_317_residues
MFDILNLALPYFGVVFIGFACGKWKGLPESGLSWMNFFLLYVSLPALMFNLIARTPFAELSNPPFLVATTLATMLTFTLA
LVLGKLIGRLSLREATMAGLAGGYGNIGYMGPGLALAVLGPKAAAPTALIFCCDSIFLFSIVPLLVELTERDHASLGHAV
RTVLQQILRNPLIMATAAGILAAALQLHPPTVIDRTLQFLQNAAAPTALFALGVTVALRPFERLPWEVPVLTVVKLVIHP
LVSLALMLLFGPFAQPWAATAVLMAALPPALNVFVIARQHDSWIEPASSAVLIGTFASVLTLTTAMWLIQSGRLAFP

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33914; Mature: 33914

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDILNLALPYFGVVFIGFACGKWKGLPESGLSWMNFFLLYVSLPALMFNLIARTPFAEL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
SNPPFLVATTLATMLTFTLALVLGKLIGRLSLREATMAGLAGGYGNIGYMGPGLALAVLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
PKAAAPTALIFCCDSIFLFSIVPLLVELTERDHASLGHAVRTVLQQILRNPLIMATAAGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LAAALQLHPPTVIDRTLQFLQNAAAPTALFALGVTVALRPFERLPWEVPVLTVVKLVIHP
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LVSLALMLLFGPFAQPWAATAVLMAALPPALNVFVIARQHDSWIEPASSAVLIGTFASVL
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHH
TLTTAMWLIQSGRLAFP
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFDILNLALPYFGVVFIGFACGKWKGLPESGLSWMNFFLLYVSLPALMFNLIARTPFAEL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC
SNPPFLVATTLATMLTFTLALVLGKLIGRLSLREATMAGLAGGYGNIGYMGPGLALAVLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
PKAAAPTALIFCCDSIFLFSIVPLLVELTERDHASLGHAVRTVLQQILRNPLIMATAAGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LAAALQLHPPTVIDRTLQFLQNAAAPTALFALGVTVALRPFERLPWEVPVLTVVKLVIHP
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LVSLALMLLFGPFAQPWAATAVLMAALPPALNVFVIARQHDSWIEPASSAVLIGTFASVL
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHH
TLTTAMWLIQSGRLAFP
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10858449; 11481430 [H]