Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is hyuE [H]
Identifier: 146340689
GI number: 146340689
Start: 3903274
End: 3904014
Strand: Reverse
Name: hyuE [H]
Synonym: BRADO3740
Alternate gene names: 146340689
Gene position: 3904014-3903274 (Counterclockwise)
Preceding gene: 146340696
Following gene: 146340688
Centisome position: 52.36
GC content: 66.94
Gene sequence:
>741_bases ATGGATGGACCGATGAGCCGCAGCGAGACCGTGATCAACGTCATCAACCCAAACATGACCGCGTCGATGACCGATCTGAT CGCGAAGGCGGCCCAGGCCAGCGCGAGCCCCATGACGCGCATCGTCGGCCGCACCGCGCGGTTCGGCGCCGCCTCGATCG AGGGACATTACGATGAAGCGATCGCCGCGGTCGGCATGCTCAAGGAGGTCGAGGCCGGAGATGCCGAGGGCTGCCACGCG CATGTCATCGCCTGCTTCGGGGATCCCGGCCTGCTGGCAGCGCGCGAAATGTCGGCCGTGCCGGTGCTCGGCATTGCCGA GGCGGCGATGCACGCGGCGAGCTTCGTCGCGACCCATTTCAGCGTCGTCACCACGCTGTCGCGCACCAAGGTGATTGCCG AGCATCTCGTGCGCAACTATGGCATGGAGCATCACTGCCGGAAGGTGCGCGCCGTCGATGTCGCCGTGCTCGATCTCGAC AAGCCCGAGGCGAATGTGCGCGGCACCCTGCTCGGCGAATGCCGAGCGGCACTGCGCGAGGACGGCATCGGCGCCATTGT GCTCGGCTGCGCCGGCATGGCCGATCTGGCGCATGATCTTTCGACTGAGCTCGGCATTCCCGTAATCGACGGCGTCGCCG CCGCCGTCCGCTTCGCCGAGGCGCTGGTCGGGCTCGGGCTGAAAACCTCGAAGCATGGCGACCTCGCGTTTCCGCTTCCG AAGGCGCGGACGACGATTTGA
Upstream 100 bases:
>100_bases ACCGCAAGCCCAATGCTGGTCACATCCGCGGGTTCCCGCCGCATCGCCCCCTCTCGACCCTGCCACGGGAACTCGGCTAG AACACGGCGAATCATAGCAG
Downstream 100 bases:
>100_bases ACTGCCGTAGCCCGGATGAGCGCAGCGATATCCGGGGTCTCACGAACTGCAGATGTGAACCCGGACGTCGCTGCGCTCAT CCGGGCTACAGAGATGGAGC
Product: putative hydantoin-racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MDGPMSRSETVINVINPNMTASMTDLIAKAAQASASPMTRIVGRTARFGAASIEGHYDEAIAAVGMLKEVEAGDAEGCHA HVIACFGDPGLLAAREMSAVPVLGIAEAAMHAASFVATHFSVVTTLSRTKVIAEHLVRNYGMEHHCRKVRAVDVAVLDLD KPEANVRGTLLGECRAALREDGIGAIVLGCAGMADLAHDLSTELGIPVIDGVAAAVRFAEALVGLGLKTSKHGDLAFPLP KARTTI
Sequences:
>Translated_246_residues MDGPMSRSETVINVINPNMTASMTDLIAKAAQASASPMTRIVGRTARFGAASIEGHYDEAIAAVGMLKEVEAGDAEGCHA HVIACFGDPGLLAAREMSAVPVLGIAEAAMHAASFVATHFSVVTTLSRTKVIAEHLVRNYGMEHHCRKVRAVDVAVLDLD KPEANVRGTLLGECRAALREDGIGAIVLGCAGMADLAHDLSTELGIPVIDGVAAAVRFAEALVGLGLKTSKHGDLAFPLP KARTTI >Mature_246_residues MDGPMSRSETVINVINPNMTASMTDLIAKAAQASASPMTRIVGRTARFGAASIEGHYDEAIAAVGMLKEVEAGDAEGCHA HVIACFGDPGLLAAREMSAVPVLGIAEAAMHAASFVATHFSVVTTLSRTKVIAEHLVRNYGMEHHCRKVRAVDVAVLDLD KPEANVRGTLLGECRAALREDGIGAIVLGCAGMADLAHDLSTELGIPVIDGVAAAVRFAEALVGLGLKTSKHGDLAFPLP KARTTI
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 25586; Mature: 25586
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGPMSRSETVINVINPNMTASMTDLIAKAAQASASPMTRIVGRTARFGAASIEGHYDEA CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHCCCCCCCCHHHHH IAAVGMLKEVEAGDAEGCHAHVIACFGDPGLLAAREMSAVPVLGIAEAAMHAASFVATHF HHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SVVTTLSRTKVIAEHLVRNYGMEHHCRKVRAVDVAVLDLDKPEANVRGTLLGECRAALRE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHH DGIGAIVLGCAGMADLAHDLSTELGIPVIDGVAAAVRFAEALVGLGLKTSKHGDLAFPLP CCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCC KARTTI CCCCCC >Mature Secondary Structure MDGPMSRSETVINVINPNMTASMTDLIAKAAQASASPMTRIVGRTARFGAASIEGHYDEA CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHCCCCCCCCHHHHH IAAVGMLKEVEAGDAEGCHAHVIACFGDPGLLAAREMSAVPVLGIAEAAMHAASFVATHF HHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH SVVTTLSRTKVIAEHLVRNYGMEHHCRKVRAVDVAVLDLDKPEANVRGTLLGECRAALRE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHH DGIGAIVLGCAGMADLAHDLSTELGIPVIDGVAAAVRFAEALVGLGLKTSKHGDLAFPLP CCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCC KARTTI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]