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The map label for this gene is 146340664

Identifier: 146340664

GI number: 146340664

Start: 3877155

End: 3878591

Strand: Reverse

Name: 146340664

Synonym: BRADO3712

Alternate gene names: NA

Gene position: 3878591-3877155 (Counterclockwise)

Preceding gene: 146340668

Following gene: 146340663

Centisome position: 52.02

GC content: 68.68

Gene sequence:

>1437_bases
GTGTGGATCTCATCACGCGTGATCTCCCGCGAGGTGACGCGCGTCGGCCGTGTGCCGGCCATCCATCCAACATCAACCCA
AACAGAGGAGGCCATCATGGTCAGGCTCAACAAGGTCCTGCGCGCCTTCACCCATGAGGGTGCGCCATCCCGACAGCTCG
CGCCGCTCGAGGCGCTGCAGCGTACGCTGATGAGCTGCCTGCTCTGGGAGGACCAGTTCTACGAGGACGGGGTCGCGATC
GCCGATCGGATCAAGGTTCTCGTAGCTGCGGTCGAGCCGCGCGAGGCGGCTCGGCTCGCCGTGAGTGCGCGCGAGGAGAT
GAAGCTGCGGCATGCGCCGCTGCTCGTTGCTCGCGAAATGGCGCGGCTGCCGCAGCACCGCGCGCTGGTGGCCGAGACCC
TGGCGCGCATCATCCAGCGGCCGGACGAGATGACCGAGCTGCTCGCAATCTACTGGGCCGACGCGCTCGGTCCGCAGCAG
CAGCGCAAGCGGCAGCCGGTCTCGGCGCAGGTCAAGAAGGGGCTGGCGAAGGCGTTCGCAAAGTTCGACGCCTATCAGCT
CGCGAAGTATGACCGCGAGGGGCCGGTGCGGCTGCGCGACGTCCTGTTCCTGGTTCACGCCAGGCCCAAGGACGACGCTC
AGGAAGCGGTGTGGAAGCAGCTCGTCGACGGCGAGCTGCCCTCGCCCGACACCTGGGAGGTCGCGCTGTCGGCGGGTGCG
GACAAGCGTGCGAGCTTCGAGCGGCTGCTTGCCGAGCGGCGGCTTGGAGCGCTTGCGCTGCTGCGCAACCTGCGGCTGAT
GCTGCAGGCCGGAGTGCCGCGCGACATGATCGCGGAAGCGATCGTGTCGATGCGAACGGACCGGATCCTGCCGTATCGGT
TCATCACGGCGGCGCGGCATGCGCCTGATGTCGAGCCCGAGCTCGAGCAGGCGATGCTGCGGTCGATCAAGGGCCATGCG
CGGCTCAAGGGCCGCACGCGGCTCCTGATCGACGTCTCCGGCTCGATGTTCGCGGCGCTGTCTGCGAAGTCTGAGATGAC
GCGCGCGGATGCGGCGTGCGGACTGGCGGTCCTCGCCCGCGAGGTCTGCGACGAGGTGGAGATCTTCACGTTCAGCGACG
CTGTCGTGAAGGTGCCGCCGCGGCGTGGCTTCGCGCTGCGCGATACGATCCTCCGGTCGCAGCCGCATTCCGGGACCTAT
CTCGGCCGGGCGGTCAAGGAGGTCGACCGCAAGGGAGACCGCCTGATCGTCTTCACCGACGAGCAGAGCCACGATGCGGT
GCCGGCGCCGAGGGCGCGCGGGACCATGGTGAACGTGGCGTCGTACCAGCACGGGGTCGGTTACGGGCCCTGGACGCGGG
TCGACGGCTTCTCCGAGTCCGTGATCGCCTGGATCGCGGCGCAGGAGCAGTCGCTGCGCAGCGCCACGCTGCACTGA

Upstream 100 bases:

>100_bases
TTCGAGTCCCACCCGGCGTTCCGTGCGCCGGTAGCTCAGCGGCAGAGCGCTATCCGCTCCACGCGAGTGGAGCGGACCTC
AGCATTCGCTCGTTCCCGGC

Downstream 100 bases:

>100_bases
CGACAAATGACCCGGACGCGTCACAGACGCGCCCGGGTCTCATTGCACAAGGGCTAGGACTCGCTGGTTCAGCATTCTTG
TTCACGAGGAGCTGAGCTGC

Product: putative ribonucleoprotein-like protein

Products: NA

Alternate protein names: TROVE Domain Protein; Ribonucleoprotein-Like; Trove Domain-Containing Protein; Ribonucleoprotein-Like Protein; Ribonucleoprotein-Related Protein

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MWISSRVISREVTRVGRVPAIHPTSTQTEEAIMVRLNKVLRAFTHEGAPSRQLAPLEALQRTLMSCLLWEDQFYEDGVAI
ADRIKVLVAAVEPREAARLAVSAREEMKLRHAPLLVAREMARLPQHRALVAETLARIIQRPDEMTELLAIYWADALGPQQ
QRKRQPVSAQVKKGLAKAFAKFDAYQLAKYDREGPVRLRDVLFLVHARPKDDAQEAVWKQLVDGELPSPDTWEVALSAGA
DKRASFERLLAERRLGALALLRNLRLMLQAGVPRDMIAEAIVSMRTDRILPYRFITAARHAPDVEPELEQAMLRSIKGHA
RLKGRTRLLIDVSGSMFAALSAKSEMTRADAACGLAVLAREVCDEVEIFTFSDAVVKVPPRRGFALRDTILRSQPHSGTY
LGRAVKEVDRKGDRLIVFTDEQSHDAVPAPRARGTMVNVASYQHGVGYGPWTRVDGFSESVIAWIAAQEQSLRSATLH

Sequences:

>Translated_478_residues
MWISSRVISREVTRVGRVPAIHPTSTQTEEAIMVRLNKVLRAFTHEGAPSRQLAPLEALQRTLMSCLLWEDQFYEDGVAI
ADRIKVLVAAVEPREAARLAVSAREEMKLRHAPLLVAREMARLPQHRALVAETLARIIQRPDEMTELLAIYWADALGPQQ
QRKRQPVSAQVKKGLAKAFAKFDAYQLAKYDREGPVRLRDVLFLVHARPKDDAQEAVWKQLVDGELPSPDTWEVALSAGA
DKRASFERLLAERRLGALALLRNLRLMLQAGVPRDMIAEAIVSMRTDRILPYRFITAARHAPDVEPELEQAMLRSIKGHA
RLKGRTRLLIDVSGSMFAALSAKSEMTRADAACGLAVLAREVCDEVEIFTFSDAVVKVPPRRGFALRDTILRSQPHSGTY
LGRAVKEVDRKGDRLIVFTDEQSHDAVPAPRARGTMVNVASYQHGVGYGPWTRVDGFSESVIAWIAAQEQSLRSATLH
>Mature_478_residues
MWISSRVISREVTRVGRVPAIHPTSTQTEEAIMVRLNKVLRAFTHEGAPSRQLAPLEALQRTLMSCLLWEDQFYEDGVAI
ADRIKVLVAAVEPREAARLAVSAREEMKLRHAPLLVAREMARLPQHRALVAETLARIIQRPDEMTELLAIYWADALGPQQ
QRKRQPVSAQVKKGLAKAFAKFDAYQLAKYDREGPVRLRDVLFLVHARPKDDAQEAVWKQLVDGELPSPDTWEVALSAGA
DKRASFERLLAERRLGALALLRNLRLMLQAGVPRDMIAEAIVSMRTDRILPYRFITAARHAPDVEPELEQAMLRSIKGHA
RLKGRTRLLIDVSGSMFAALSAKSEMTRADAACGLAVLAREVCDEVEIFTFSDAVVKVPPRRGFALRDTILRSQPHSGTY
LGRAVKEVDRKGDRLIVFTDEQSHDAVPAPRARGTMVNVASYQHGVGYGPWTRVDGFSESVIAWIAAQEQSLRSATLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53399; Mature: 53399

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50988 TROVE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWISSRVISREVTRVGRVPAIHPTSTQTEEAIMVRLNKVLRAFTHEGAPSRQLAPLEALQ
CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
RTLMSCLLWEDQFYEDGVAIADRIKVLVAAVEPREAARLAVSAREEMKLRHAPLLVAREM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
ARLPQHRALVAETLARIIQRPDEMTELLAIYWADALGPQQQRKRQPVSAQVKKGLAKAFA
HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHH
KFDAYQLAKYDREGPVRLRDVLFLVHARPKDDAQEAVWKQLVDGELPSPDTWEVALSAGA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCC
DKRASFERLLAERRLGALALLRNLRLMLQAGVPRDMIAEAIVSMRTDRILPYRFITAARH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHC
APDVEPELEQAMLRSIKGHARLKGRTRLLIDVSGSMFAALSAKSEMTRADAACGLAVLAR
CCCCCHHHHHHHHHHHCCCCEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
EVCDEVEIFTFSDAVVKVPPRRGFALRDTILRSQPHSGTYLGRAVKEVDRKGDRLIVFTD
HHHCCCEEEEECCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEC
EQSHDAVPAPRARGTMVNVASYQHGVGYGPWTRVDGFSESVIAWIAAQEQSLRSATLH
CCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWISSRVISREVTRVGRVPAIHPTSTQTEEAIMVRLNKVLRAFTHEGAPSRQLAPLEALQ
CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
RTLMSCLLWEDQFYEDGVAIADRIKVLVAAVEPREAARLAVSAREEMKLRHAPLLVAREM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
ARLPQHRALVAETLARIIQRPDEMTELLAIYWADALGPQQQRKRQPVSAQVKKGLAKAFA
HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHH
KFDAYQLAKYDREGPVRLRDVLFLVHARPKDDAQEAVWKQLVDGELPSPDTWEVALSAGA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCC
DKRASFERLLAERRLGALALLRNLRLMLQAGVPRDMIAEAIVSMRTDRILPYRFITAARH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHC
APDVEPELEQAMLRSIKGHARLKGRTRLLIDVSGSMFAALSAKSEMTRADAACGLAVLAR
CCCCCHHHHHHHHHHHCCCCEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
EVCDEVEIFTFSDAVVKVPPRRGFALRDTILRSQPHSGTYLGRAVKEVDRKGDRLIVFTD
HHHCCCEEEEECCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEC
EQSHDAVPAPRARGTMVNVASYQHGVGYGPWTRVDGFSESVIAWIAAQEQSLRSATLH
CCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA