Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340663
Identifier: 146340663
GI number: 146340663
Start: 3875485
End: 3876891
Strand: Reverse
Name: 146340663
Synonym: BRADO3711
Alternate gene names: NA
Gene position: 3876891-3875485 (Counterclockwise)
Preceding gene: 146340664
Following gene: 146340662
Centisome position: 51.99
GC content: 68.37
Gene sequence:
>1407_bases GTGACTCCCTGGGATTTCCGTGACGCCATGTTTCTCTCGATCGCCACCACCCATCAGCCCGCCACCGATCTCGGCTTCCT GCTCAACAAGCATCCGGACCGGCTGCACGAGTTCGAGCTCACCTCGGGCAAGGCGCTGATCTTCTATCCCGAGGCCAGCG AGGCCCGCTGCGAGGCGGCGCTGGTGCTCGACGTCGATCCGATCGGGCTCGTTCGCGGCAAGGGCCAGAGCGACGGACTG CTCGATCAATATGTCAACGACCGCCCGTATGCCGCGTCTTCGTTCCTGTCGGTGGCGCTCAATAAGGCGTTCCGGACCGC GATGAACGGCGTCAGCAGCGCGCGCCAGGAACTAGCCGACAGCGCGATTCCGCTGGAGGCGGTGGTGACGCCCCTGCCCT TGCGCGGCGGTGAAACCGTGGTGCGCCAGCTGTTCGAGCCGCTCGGCTGGGACGTCTCGCTCACGCCCATTGCGGGTCCC CAAGGCGACACGACCAGCCGCTACGTCCGCCTCACCTTGCGCGGCACCAACAGGCTCAGCGCCCTGCTGAACCACCTCTA TGTGCTGATCCCGGTGATGGACGACGCGAAGCATTACTGGGTCGGCGACGAGGAGATCGACAAGCTGCTCAAGCGCGGCG AAGGCTGGCTCGATGCCCATCCGGCCAAGGAGCTGATCGTCCGCCGCTATCTTCGCCATCGCGGCGTGCTCGCGCGTGCG GCGCTGGCGCGGCTCGCACCTGAGACGCAGGACGAGGCGCTGGAGACCGAGACGCAGAGCCAGTCCGAGGAGACGCTGGA GGCGCCGATCCGGCTCAACGATTTGCGCCTCGCCGCCGTCGTCGAAGCTCTGCGCGACAGCGGCGCCCGGACGATCGCCG ATCTCGGCTGCGGCGAAGGCAAGCTGCTGCAGCTGTTGCTGCGCGAGCGCTTTGCCGAGCGCCTGATCGGCCTCGATCCC GCCGCGCGCGAGCTGGAGCGCGCGGCCAAGCGGCTCAAGCTCGGCGCGCCCGGCGGCCCGCCCGAGGGACGTGTCACACT GCTGCACGGCTCGCTCACCTATCGCGATGCGCGCTGGGCCGACGCCGATGCGGCCGCGCTGGTCGAGGTGATCGAGCATC TCGATCCCGACCGGCTACCGATGGTGGAGCGTGTCGTGTTCGGCGCGGCGAGGCCGCGCGTGGTCATCGTGACCACGCCG AATGCCGACTACAATGCGCTGTTTCCGAGCCTGCCCGCCGGCCAGTTCCGGCACCGCGACCACCGCTTCGAATGGACGCG CGCCGAATTCGCTGCGTGGGCGCAGCGCGTCTGCGAAACCTTCAATTGCCAGGTCGCCTTCTCCGGCATCGGCCATCACG ACGAGACCCTGGGCGCGCCGACACAGATGGCCGTCTTCACCCGCTGA
Upstream 100 bases:
>100_bases GATTGAACCCGAAATCTCGAGATTGTTCAAAACAGACGCAAGACAATGTCGAGATTCCGGGTTCAAGGCCTGTCGGCCTT GCCCCGGAATGACGGTGGTT
Downstream 100 bases:
>100_bases GCACCGTCATGAACATCGACATCCCCGACTTCGCGCTGGTCGTGCTGATCGGCTCGACCGGCTCCGGCAAGTCGACCTTC GCCGCCAAACACTTCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Family Protein
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTPWDFRDAMFLSIATTHQPATDLGFLLNKHPDRLHEFELTSGKALIFYPEASEARCEAALVLDVDPIGLVRGKGQSDGL LDQYVNDRPYAASSFLSVALNKAFRTAMNGVSSARQELADSAIPLEAVVTPLPLRGGETVVRQLFEPLGWDVSLTPIAGP QGDTTSRYVRLTLRGTNRLSALLNHLYVLIPVMDDAKHYWVGDEEIDKLLKRGEGWLDAHPAKELIVRRYLRHRGVLARA ALARLAPETQDEALETETQSQSEETLEAPIRLNDLRLAAVVEALRDSGARTIADLGCGEGKLLQLLLRERFAERLIGLDP AARELERAAKRLKLGAPGGPPEGRVTLLHGSLTYRDARWADADAAALVEVIEHLDPDRLPMVERVVFGAARPRVVIVTTP NADYNALFPSLPAGQFRHRDHRFEWTRAEFAAWAQRVCETFNCQVAFSGIGHHDETLGAPTQMAVFTR
Sequences:
>Translated_468_residues MTPWDFRDAMFLSIATTHQPATDLGFLLNKHPDRLHEFELTSGKALIFYPEASEARCEAALVLDVDPIGLVRGKGQSDGL LDQYVNDRPYAASSFLSVALNKAFRTAMNGVSSARQELADSAIPLEAVVTPLPLRGGETVVRQLFEPLGWDVSLTPIAGP QGDTTSRYVRLTLRGTNRLSALLNHLYVLIPVMDDAKHYWVGDEEIDKLLKRGEGWLDAHPAKELIVRRYLRHRGVLARA ALARLAPETQDEALETETQSQSEETLEAPIRLNDLRLAAVVEALRDSGARTIADLGCGEGKLLQLLLRERFAERLIGLDP AARELERAAKRLKLGAPGGPPEGRVTLLHGSLTYRDARWADADAAALVEVIEHLDPDRLPMVERVVFGAARPRVVIVTTP NADYNALFPSLPAGQFRHRDHRFEWTRAEFAAWAQRVCETFNCQVAFSGIGHHDETLGAPTQMAVFTR >Mature_467_residues TPWDFRDAMFLSIATTHQPATDLGFLLNKHPDRLHEFELTSGKALIFYPEASEARCEAALVLDVDPIGLVRGKGQSDGLL DQYVNDRPYAASSFLSVALNKAFRTAMNGVSSARQELADSAIPLEAVVTPLPLRGGETVVRQLFEPLGWDVSLTPIAGPQ GDTTSRYVRLTLRGTNRLSALLNHLYVLIPVMDDAKHYWVGDEEIDKLLKRGEGWLDAHPAKELIVRRYLRHRGVLARAA LARLAPETQDEALETETQSQSEETLEAPIRLNDLRLAAVVEALRDSGARTIADLGCGEGKLLQLLLRERFAERLIGLDPA ARELERAAKRLKLGAPGGPPEGRVTLLHGSLTYRDARWADADAAALVEVIEHLDPDRLPMVERVVFGAARPRVVIVTTPN ADYNALFPSLPAGQFRHRDHRFEWTRAEFAAWAQRVCETFNCQVAFSGIGHHDETLGAPTQMAVFTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI156564367, Length=186, Percent_Identity=37.6344086021505, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI156564365, Length=186, Percent_Identity=37.6344086021505, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI25151692, Length=148, Percent_Identity=37.1621621621622, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25151690, Length=148, Percent_Identity=37.1621621621622, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI19922074, Length=220, Percent_Identity=29.5454545454545, Blast_Score=108, Evalue=8e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51807; Mature: 51675
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPWDFRDAMFLSIATTHQPATDLGFLLNKHPDRLHEFELTSGKALIFYPEASEARCEAA CCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHEEECCCCEEEEECCCCCCCCCEE LVLDVDPIGLVRGKGQSDGLLDQYVNDRPYAASSFLSVALNKAFRTAMNGVSSARQELAD EEEECCCCCEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIPLEAVVTPLPLRGGETVVRQLFEPLGWDVSLTPIAGPQGDTTSRYVRLTLRGTNRLS CCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEECCHHHH ALLNHLYVLIPVMDDAKHYWVGDEEIDKLLKRGEGWLDAHPAKELIVRRYLRHRGVLARA HHHHHHEEEEEEECCCCEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHH ALARLAPETQDEALETETQSQSEETLEAPIRLNDLRLAAVVEALRDSGARTIADLGCGEG HHHHHCCCCHHHHHHHHHHCCCHHHHHCCCEECHHHHHHHHHHHHCCCCCEEHHCCCCCH KLLQLLLRERFAERLIGLDPAARELERAAKRLKLGAPGGPPEGRVTLLHGSLTYRDARWA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCC DADAAALVEVIEHLDPDRLPMVERVVFGAARPRVVIVTTPNADYNALFPSLPAGQFRHRD CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCC HRFEWTRAEFAAWAQRVCETFNCQVAFSGIGHHDETLGAPTQMAVFTR CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCCCCEEEECC >Mature Secondary Structure TPWDFRDAMFLSIATTHQPATDLGFLLNKHPDRLHEFELTSGKALIFYPEASEARCEAA CCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHEEECCCCEEEEECCCCCCCCCEE LVLDVDPIGLVRGKGQSDGLLDQYVNDRPYAASSFLSVALNKAFRTAMNGVSSARQELAD EEEECCCCCEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIPLEAVVTPLPLRGGETVVRQLFEPLGWDVSLTPIAGPQGDTTSRYVRLTLRGTNRLS CCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEECCHHHH ALLNHLYVLIPVMDDAKHYWVGDEEIDKLLKRGEGWLDAHPAKELIVRRYLRHRGVLARA HHHHHHEEEEEEECCCCEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHH ALARLAPETQDEALETETQSQSEETLEAPIRLNDLRLAAVVEALRDSGARTIADLGCGEG HHHHHCCCCHHHHHHHHHHCCCHHHHHCCCEECHHHHHHHHHHHHCCCCCEEHHCCCCCH KLLQLLLRERFAERLIGLDPAARELERAAKRLKLGAPGGPPEGRVTLLHGSLTYRDARWA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCC DADAAALVEVIEHLDPDRLPMVERVVFGAARPRVVIVTTPNADYNALFPSLPAGQFRHRD CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCC HRFEWTRAEFAAWAQRVCETFNCQVAFSGIGHHDETLGAPTQMAVFTR CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA