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The map label for this gene is ygaU [C]

Identifier: 146340484

GI number: 146340484

Start: 3714662

End: 3715945

Strand: Direct

Name: ygaU [C]

Synonym: BRADO3526

Alternate gene names: 146340484

Gene position: 3714662-3715945 (Clockwise)

Preceding gene: 146340483

Following gene: 146340488

Centisome position: 49.82

GC content: 68.07

Gene sequence:

>1284_bases
ATGTGGCTCGATTCGCGCGCTGTCGGCATTACCAAGGGACGGGACCGACGCATGATTTCGAACGGCAAGCCGATGATCCA
GGTCATCCTTGGTGTCGCGGGCTTCGCCGTCTCAGCCGCCGCCTTCGTCTTCGTTCTCGGTCCGATCACCAATCGCGATC
CCGCGATTTCGGGCCGCGACAAGATCGCCACGAGCGAGCCCGTGAAGATGCCTGCTGGAGTCGACAACGCCGGCCCAAGC
CTGACGGAAGCACAGCGTTCGCTCCCTTGGGAGCAGCGTGCAGGTCCCCTCACCACGATCCAGCAGCAGGCCGATGGTCT
CGCCGACGTGCTGGGCTCGCTCGCGCCGCCCTCGGCCGCAGACACCGATCTGCCGGCTTTCGACGTGGTCAATGTCGATC
CGTCGGGGGAGGCCGTCGTGGCCGGGCGCGCGGCGCCGGGTGCGCGTGTGGAGCTGCTGCGCGATGGCGAGGTGCTTGAC
CGCGTGGTCGCCGATCAGGCCGGGCAGTTCGCCATGGTGCCTTCACGGCTTCCGGCGGGGAGCTACGATCTGACGCTGCG
CTCGAAGCTCGCCGACGGCCGCGAGGTCACGTCAAAGCAAAGCGTTGCCGTGAAGGTCGAAGCCAGCCGGCCGGCGACCG
TGGCGATGGTCGCGCCGGACGAACTCACAAGGGGGCTCTCCAAGCCCGCGGCGACCCCGCAGGCGCTGGCGGTCGACGCG
GTGGATCATGAGGCGAACGGCGTTCTGCACATCAACGGCCGAGCCCGCCCTGGCGCCACCGTGAGAGTGTATCGCAACGA
CCGCCTGGTCTCCTCGACGGTCGCGGGGGCCGACGGACGCCTCAGCATCACGATCGGCGAGGGCGTCAGCCGGGCGGGCG
ATGACCGCATCAGGCTCGACGAGGTCGATGCGATATCGGGCTCCGTCCAGGCGCGCGCCGAAGTGGCGCTGAGCCTGCCC
GACGACACGCCGACGACGGCATCGGTGGCTTCAAGTGCGACCGCGACGGCCAACGTTGGCCCGACCTCTCAGCCGGCGCT
GCTCGCGGCCGCGGGGGATCCGCGCGAAGCCATCGTGCCCTCAGCCAAGACGGATCCGGACAAGATCGATCCGAAGTCAG
CGACGGTAACGGTCGTGCGTGGTGACAGCCTGTGGCACATCAGCCGGCGCATGCTCGGCGGCGGCACGCGTTACGCGGTG
ATCTACAAGGCGAACCGGGCGCAGATCCGCAGTCCCGATCTGATTTATCCGGGTCAGGTCTTCACGATTCCAGAGAAGCC
ATAG

Upstream 100 bases:

>100_bases
GTTGTGGCCGGCCTGCATCACATCCTCACTCCTGAGGACTGTCCGGAGTCCTCCGGTCTCGCCGCGAGCCCGCCGTAATG
GTGTTTGGACAGCGCCGATG

Downstream 100 bases:

>100_bases
TTGGCGCGCACTCTCGATTCGACAGAGCCACGGACGATTGTCGCTTGTCTTGTGCACGGCTAGGCCGCGGTCTCCCTCGA
CGTGCTTTCAAGAAAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MWLDSRAVGITKGRDRRMISNGKPMIQVILGVAGFAVSAAAFVFVLGPITNRDPAISGRDKIATSEPVKMPAGVDNAGPS
LTEAQRSLPWEQRAGPLTTIQQQADGLADVLGSLAPPSAADTDLPAFDVVNVDPSGEAVVAGRAAPGARVELLRDGEVLD
RVVADQAGQFAMVPSRLPAGSYDLTLRSKLADGREVTSKQSVAVKVEASRPATVAMVAPDELTRGLSKPAATPQALAVDA
VDHEANGVLHINGRARPGATVRVYRNDRLVSSTVAGADGRLSITIGEGVSRAGDDRIRLDEVDAISGSVQARAEVALSLP
DDTPTTASVASSATATANVGPTSQPALLAAAGDPREAIVPSAKTDPDKIDPKSATVTVVRGDSLWHISRRMLGGGTRYAV
IYKANRAQIRSPDLIYPGQVFTIPEKP

Sequences:

>Translated_427_residues
MWLDSRAVGITKGRDRRMISNGKPMIQVILGVAGFAVSAAAFVFVLGPITNRDPAISGRDKIATSEPVKMPAGVDNAGPS
LTEAQRSLPWEQRAGPLTTIQQQADGLADVLGSLAPPSAADTDLPAFDVVNVDPSGEAVVAGRAAPGARVELLRDGEVLD
RVVADQAGQFAMVPSRLPAGSYDLTLRSKLADGREVTSKQSVAVKVEASRPATVAMVAPDELTRGLSKPAATPQALAVDA
VDHEANGVLHINGRARPGATVRVYRNDRLVSSTVAGADGRLSITIGEGVSRAGDDRIRLDEVDAISGSVQARAEVALSLP
DDTPTTASVASSATATANVGPTSQPALLAAAGDPREAIVPSAKTDPDKIDPKSATVTVVRGDSLWHISRRMLGGGTRYAV
IYKANRAQIRSPDLIYPGQVFTIPEKP
>Mature_427_residues
MWLDSRAVGITKGRDRRMISNGKPMIQVILGVAGFAVSAAAFVFVLGPITNRDPAISGRDKIATSEPVKMPAGVDNAGPS
LTEAQRSLPWEQRAGPLTTIQQQADGLADVLGSLAPPSAADTDLPAFDVVNVDPSGEAVVAGRAAPGARVELLRDGEVLD
RVVADQAGQFAMVPSRLPAGSYDLTLRSKLADGREVTSKQSVAVKVEASRPATVAMVAPDELTRGLSKPAATPQALAVDA
VDHEANGVLHINGRARPGATVRVYRNDRLVSSTVAGADGRLSITIGEGVSRAGDDRIRLDEVDAISGSVQARAEVALSLP
DDTPTTASVASSATATANVGPTSQPALLAAAGDPREAIVPSAKTDPDKIDPKSATVTVVRGDSLWHISRRMLGGGTRYAV
IYKANRAQIRSPDLIYPGQVFTIPEKP

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44413; Mature: 44413

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLDSRAVGITKGRDRRMISNGKPMIQVILGVAGFAVSAAAFVFVLGPITNRDPAISGRD
CCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCC
KIATSEPVKMPAGVDNAGPSLTEAQRSLPWEQRAGPLTTIQQQADGLADVLGSLAPPSAA
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHHHHHHHCHHHHHHHCCCCCCCC
DTDLPAFDVVNVDPSGEAVVAGRAAPGARVELLRDGEVLDRVVADQAGQFAMVPSRLPAG
CCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCEEECCCCCCCC
SYDLTLRSKLADGREVTSKQSVAVKVEASRPATVAMVAPDELTRGLSKPAATPQALAVDA
CEEEEEHHHCCCCHHHCCCCEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCEEEEEE
VDHEANGVLHINGRARPGATVRVYRNDRLVSSTVAGADGRLSITIGEGVSRAGDDRIRLD
ECCCCCCEEEECCCCCCCCEEEEEECCEEEEHEECCCCCEEEEEECCCCCCCCCCCEEEE
EVDAISGSVQARAEVALSLPDDTPTTASVASSATATANVGPTSQPALLAAAGDPREAIVP
HHHHCCCCCEEEEEEEEECCCCCCCHHHHHCCCCEECCCCCCCCCEEEEECCCCHHHCCC
SAKTDPDKIDPKSATVTVVRGDSLWHISRRMLGGGTRYAVIYKANRAQIRSPDLIYPGQV
CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCEECCCEE
FTIPEKP
EECCCCC
>Mature Secondary Structure
MWLDSRAVGITKGRDRRMISNGKPMIQVILGVAGFAVSAAAFVFVLGPITNRDPAISGRD
CCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCC
KIATSEPVKMPAGVDNAGPSLTEAQRSLPWEQRAGPLTTIQQQADGLADVLGSLAPPSAA
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHHHHHHHCHHHHHHHCCCCCCCC
DTDLPAFDVVNVDPSGEAVVAGRAAPGARVELLRDGEVLDRVVADQAGQFAMVPSRLPAG
CCCCCCEEEEEECCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHCCCCEEECCCCCCCC
SYDLTLRSKLADGREVTSKQSVAVKVEASRPATVAMVAPDELTRGLSKPAATPQALAVDA
CEEEEEHHHCCCCHHHCCCCEEEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCEEEEEE
VDHEANGVLHINGRARPGATVRVYRNDRLVSSTVAGADGRLSITIGEGVSRAGDDRIRLD
ECCCCCCEEEECCCCCCCCEEEEEECCEEEEHEECCCCCEEEEEECCCCCCCCCCCEEEE
EVDAISGSVQARAEVALSLPDDTPTTASVASSATATANVGPTSQPALLAAAGDPREAIVP
HHHHCCCCCEEEEEEEEECCCCCCCHHHHHCCCCEECCCCCCCCCEEEEECCCCHHHCCC
SAKTDPDKIDPKSATVTVVRGDSLWHISRRMLGGGTRYAVIYKANRAQIRSPDLIYPGQV
CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCEECCCEE
FTIPEKP
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA