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The map label for this gene is ygaU [C]

Identifier: 146340480

GI number: 146340480

Start: 3709263

End: 3710525

Strand: Direct

Name: ygaU [C]

Synonym: BRADO3522

Alternate gene names: 146340480

Gene position: 3709263-3710525 (Clockwise)

Preceding gene: 146340479

Following gene: 146340482

Centisome position: 49.74

GC content: 71.42

Gene sequence:

>1263_bases
TTGCCCAGGGACGGATCACCGATGACCATCGGAACCAGCGGACGATTGATCTGGGGAGGCGGCGCCGTCGCGGCGGTCGT
GGTCGCCGGGCTTGTCGTCGCTTTTGCGCAGGGTTTTGGACTCGATCTGTCGATCTTCAAGCACGGGCGGATGTCCGCGA
GCCAGAACGGCGCGACTGGAGCGGGCCCTGCAACGGCCGGTGCCTCGCCGTCGTCCGCTGCGCCGCAAGGCGTCTCGGCA
GAGGAGCAGAACAAGACAGACAAGAGCGCTGCGACGCAGGCCGCATCCGCGCTGGCCAACGCGCAGCAGCAGGCCAGTGG
GCTGGCTGCACTGCTGGCGCCGGTGACGCCGCCGGCGACCCAGAGCGAGGAGCCGTCGTTCGATGTGGTCAGCGTGGAGC
CGTCTGGCGACACCGTCGTCGCCGGCCGCGCGGCGCCGGGGGCCACCGTCGAGCTTTTGCGCAACGGCGAGCCGCATGCC
CGGGTTGTGGCCGATCGCGCAGGGCAGTTCTCCATGGTGCCGCCGCCGCTGCCGCCCGGGACGTTCGAGCTGACCTTGCG
GGCCAAGCAGCCGGACGGCCGTGAGCTGTCATCCAAGCAGAGCGTGGCCGTGGTGGTCGAGGCCGGCAAGCGGCCGGCGA
CCGTCGCGGTGATCGCGCCGGACCAGGCGACGCGCGTGCTGTCGAAGCCGGCTGCGCCGCTCGCCGTGGCGGTGGAGGCC
GTCGATTTCGAGCCGAACGGCAATCTGCGTGTCAGTGGCCGCGCCAGGCCGGGCGCGACCGTCCGGATCTATCTGAACGA
TCGCCTCGTCAGCACGGCAACCGCCGGTACCGATGGCCGCGTCGCGACCGTCATCAAGGACGCTACCTGGTCCGGCAAGG
ACCGGCTGCGGCTCGACGAGGTCGACGCCAAGACCGGCGCCGTTCAGGCGCGCGCCGAGGTGCCGTTGAACGTACCGGAG
ACGCTCACCACCGCCTCACTGCCGGCTGGCTCCGGCCAGGGACAGGGAAGCGGCGCTCCGGGTGCGCGGACCCAGCTCGC
GGCGGCTTCGCCGGCCGACCTCAAGGACATGGCCACGTCGCCGGCCCGCAACGGCGCCAGGACGATCACCGTGTCGCGCG
GCGACAGCCTGTGGCACATCAGCCGCCGCCTGCTCGGCGAGGGCACGCGCTACGCCGTCATCTACCAGGCCAACCGCGAA
CAGATCCGTCGGCCGGACCTGATCTACCCGGGCCAGGTGTTCGTGCTGCCGGGCAAGCGCTGA

Upstream 100 bases:

>100_bases
GCGTGGCCTCGGTTGAGCGAGCGATGGCGTTCCGCCCTGCATGATGCTATGAGCAAAGGGAGATTCCTGCTGACGGAGCC
GTCGTCTCCGCGCCTCGCGC

Downstream 100 bases:

>100_bases
CCGCGATCGAGGCGATCTAGGCGAGCAGCTCGCTCGCCAGCTCGCCCAGCCGCTCCACGCTGCGCTCGATGCGGGCGTCC
CAGTCGTGGCTGCAGCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MPRDGSPMTIGTSGRLIWGGGAVAAVVVAGLVVAFAQGFGLDLSIFKHGRMSASQNGATGAGPATAGASPSSAAPQGVSA
EEQNKTDKSAATQAASALANAQQQASGLAALLAPVTPPATQSEEPSFDVVSVEPSGDTVVAGRAAPGATVELLRNGEPHA
RVVADRAGQFSMVPPPLPPGTFELTLRAKQPDGRELSSKQSVAVVVEAGKRPATVAVIAPDQATRVLSKPAAPLAVAVEA
VDFEPNGNLRVSGRARPGATVRIYLNDRLVSTATAGTDGRVATVIKDATWSGKDRLRLDEVDAKTGAVQARAEVPLNVPE
TLTTASLPAGSGQGQGSGAPGARTQLAAASPADLKDMATSPARNGARTITVSRGDSLWHISRRLLGEGTRYAVIYQANRE
QIRRPDLIYPGQVFVLPGKR

Sequences:

>Translated_420_residues
MPRDGSPMTIGTSGRLIWGGGAVAAVVVAGLVVAFAQGFGLDLSIFKHGRMSASQNGATGAGPATAGASPSSAAPQGVSA
EEQNKTDKSAATQAASALANAQQQASGLAALLAPVTPPATQSEEPSFDVVSVEPSGDTVVAGRAAPGATVELLRNGEPHA
RVVADRAGQFSMVPPPLPPGTFELTLRAKQPDGRELSSKQSVAVVVEAGKRPATVAVIAPDQATRVLSKPAAPLAVAVEA
VDFEPNGNLRVSGRARPGATVRIYLNDRLVSTATAGTDGRVATVIKDATWSGKDRLRLDEVDAKTGAVQARAEVPLNVPE
TLTTASLPAGSGQGQGSGAPGARTQLAAASPADLKDMATSPARNGARTITVSRGDSLWHISRRLLGEGTRYAVIYQANRE
QIRRPDLIYPGQVFVLPGKR
>Mature_419_residues
PRDGSPMTIGTSGRLIWGGGAVAAVVVAGLVVAFAQGFGLDLSIFKHGRMSASQNGATGAGPATAGASPSSAAPQGVSAE
EQNKTDKSAATQAASALANAQQQASGLAALLAPVTPPATQSEEPSFDVVSVEPSGDTVVAGRAAPGATVELLRNGEPHAR
VVADRAGQFSMVPPPLPPGTFELTLRAKQPDGRELSSKQSVAVVVEAGKRPATVAVIAPDQATRVLSKPAAPLAVAVEAV
DFEPNGNLRVSGRARPGATVRIYLNDRLVSTATAGTDGRVATVIKDATWSGKDRLRLDEVDAKTGAVQARAEVPLNVPET
LTTASLPAGSGQGQGSGAPGARTQLAAASPADLKDMATSPARNGARTITVSRGDSLWHISRRLLGEGTRYAVIYQANREQ
IRRPDLIYPGQVFVLPGKR

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42939; Mature: 42808

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDGSPMTIGTSGRLIWGGGAVAAVVVAGLVVAFAQGFGLDLSIFKHGRMSASQNGATG
CCCCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
AGPATAGASPSSAAPQGVSAEEQNKTDKSAATQAASALANAQQQASGLAALLAPVTPPAT
CCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
QSEEPSFDVVSVEPSGDTVVAGRAAPGATVELLRNGEPHARVVADRAGQFSMVPPPLPPG
CCCCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
TFELTLRAKQPDGRELSSKQSVAVVVEAGKRPATVAVIAPDQATRVLSKPAAPLAVAVEA
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHCCCCCEEEEEEE
VDFEPNGNLRVSGRARPGATVRIYLNDRLVSTATAGTDGRVATVIKDATWSGKDRLRLDE
EEECCCCCEEEECCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEC
VDAKTGAVQARAEVPLNVPETLTTASLPAGSGQGQGSGAPGARTQLAAASPADLKDMATS
CCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCC
PARNGARTITVSRGDSLWHISRRLLGEGTRYAVIYQANREQIRRPDLIYPGQVFVLPGKR
CCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCHHHCCCCCEECCCEEEEECCCC
>Mature Secondary Structure 
PRDGSPMTIGTSGRLIWGGGAVAAVVVAGLVVAFAQGFGLDLSIFKHGRMSASQNGATG
CCCCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
AGPATAGASPSSAAPQGVSAEEQNKTDKSAATQAASALANAQQQASGLAALLAPVTPPAT
CCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
QSEEPSFDVVSVEPSGDTVVAGRAAPGATVELLRNGEPHARVVADRAGQFSMVPPPLPPG
CCCCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
TFELTLRAKQPDGRELSSKQSVAVVVEAGKRPATVAVIAPDQATRVLSKPAAPLAVAVEA
CEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHCCCCCEEEEEEE
VDFEPNGNLRVSGRARPGATVRIYLNDRLVSTATAGTDGRVATVIKDATWSGKDRLRLDE
EEECCCCCEEEECCCCCCCEEEEEECCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEC
VDAKTGAVQARAEVPLNVPETLTTASLPAGSGQGQGSGAPGARTQLAAASPADLKDMATS
CCCCCCCEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCC
PARNGARTITVSRGDSLWHISRRLLGEGTRYAVIYQANREQIRRPDLIYPGQVFVLPGKR
CCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCHHHCCCCCEECCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA