| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hisC1 [H]
Identifier: 146340482
GI number: 146340482
Start: 3712086
End: 3713228
Strand: Direct
Name: hisC1 [H]
Synonym: BRADO3524
Alternate gene names: 146340482
Gene position: 3712086-3713228 (Clockwise)
Preceding gene: 146340480
Following gene: 146340483
Centisome position: 49.78
GC content: 66.84
Gene sequence:
>1143_bases ATGCCGCACGTGCCCAGCCGCTTCCCGCACAACGACATCATCAGCCTGACCACCCAGCCGGTCTGCTACGATCTCGCCGA GAGCATTGGTCCGGATCTCAGGCTCGGCGGGCTGCTCACAGACAGCGACGCATTGCAGGAACTCGTGCTGAGCTACGGTC CGACTGAAGGCCACGCCGAGCTGCGCGAACTGATCGCGGCCCGGCATGGGGTCGGGGCTGACGATGTCATCACCACCGTG GGCGGCATGCAGGCGCTGTTCCTGATCGCCTTCGTTCTCGGCGAGCCGGGCGCGGAGGCCGTCATTGGACGTCCTGCATT TCCCAATGCGCGCAACGTCCTCGCATCGGTGGGCTTGCGCGTCATCGACCTGATGCTGCACTTCGACGACGGCTATCGTC TCGATACCGGCCGCCTGCGATCGCTGCTGAGCGCGCGCACGCGGCTGGTCAGCCTGGCCTCACCGCAGAACCCATCCGGC GTCGCGCTGTCCGATGCGGAGCTGCGTGACGTGCTCGCGGCCATGGACGAGATCTGTCCCGAGGCGTTCCTGCTGATCGA CGAGACCTATCGCGAGGCCGTCCATGGCGACGCCGCGCCGCGGCCGAGCCTGGTGGGCCGTGATCGTCGCATCATCAGCT GTGCATCGTTCTCGAAATGTCATGGCGCGCCGGGCATCCGCACCGGATGGGTGATCACCCGCGACCCGGCGCTGCGCGCG CAGCTCGTGCTCGGCAAGTTCAACACGACGATCTCGAACTCGGTCGTCGACGAGGCGATCGCGCTGCGAATTCTGCGCGA GCTGGACACGATCATGCGCGACCGGCGCGGTCATCTCGCTGCGTGCCTGGCGCGCACCGCCGCGTTCGTAGCCGACAATG GCAAACTGATTGAATGGATCAGGCCGGAGGCCGGCGCGCTGTGTTGCGTCAGACTCAGGCGCGAGATGTTCGACGAGGCG GCCGTGGCTCGCTTCCATCGCGAGCTGAGCGTGCGTGAGACGCGCGTTGCGCCAGGATCGTGGTTCGGCGACGAGGCGCG GGTGTTCCGGCTCGGTTTTGGCGTGCTGGCGTTGCCCGAGCTCGACGAAGCGCTGCAGCGTGTGGCGCAGACGTTGACGT CGGCGTCGATGATGACGGTCTAG
Upstream 100 bases:
>100_bases ATCCAATCGCAGATCTGTACTGGTAGCAATCGCGCATTTCTGTATCTGTCAGCGCCGATCCCCAGAGCGGTAGCTTGAAC GTGTCATTTGGAGCTTCGCC
Downstream 100 bases:
>100_bases CTCCGTCATGTCGAGCGAAGCAATCCAGGGCTGCGAAAGCCACTCCGGATTGCTTCGTCGCTGCGCGCCTTGCAATGACG AGCGAGACCGAGTCCCTGAC
Product: putative aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1 [H]
Number of amino acids: Translated: 380; Mature: 379
Protein sequence:
>380_residues MPHVPSRFPHNDIISLTTQPVCYDLAESIGPDLRLGGLLTDSDALQELVLSYGPTEGHAELRELIAARHGVGADDVITTV GGMQALFLIAFVLGEPGAEAVIGRPAFPNARNVLASVGLRVIDLMLHFDDGYRLDTGRLRSLLSARTRLVSLASPQNPSG VALSDAELRDVLAAMDEICPEAFLLIDETYREAVHGDAAPRPSLVGRDRRIISCASFSKCHGAPGIRTGWVITRDPALRA QLVLGKFNTTISNSVVDEAIALRILRELDTIMRDRRGHLAACLARTAAFVADNGKLIEWIRPEAGALCCVRLRREMFDEA AVARFHRELSVRETRVAPGSWFGDEARVFRLGFGVLALPELDEALQRVAQTLTSASMMTV
Sequences:
>Translated_380_residues MPHVPSRFPHNDIISLTTQPVCYDLAESIGPDLRLGGLLTDSDALQELVLSYGPTEGHAELRELIAARHGVGADDVITTV GGMQALFLIAFVLGEPGAEAVIGRPAFPNARNVLASVGLRVIDLMLHFDDGYRLDTGRLRSLLSARTRLVSLASPQNPSG VALSDAELRDVLAAMDEICPEAFLLIDETYREAVHGDAAPRPSLVGRDRRIISCASFSKCHGAPGIRTGWVITRDPALRA QLVLGKFNTTISNSVVDEAIALRILRELDTIMRDRRGHLAACLARTAAFVADNGKLIEWIRPEAGALCCVRLRREMFDEA AVARFHRELSVRETRVAPGSWFGDEARVFRLGFGVLALPELDEALQRVAQTLTSASMMTV >Mature_379_residues PHVPSRFPHNDIISLTTQPVCYDLAESIGPDLRLGGLLTDSDALQELVLSYGPTEGHAELRELIAARHGVGADDVITTVG GMQALFLIAFVLGEPGAEAVIGRPAFPNARNVLASVGLRVIDLMLHFDDGYRLDTGRLRSLLSARTRLVSLASPQNPSGV ALSDAELRDVLAAMDEICPEAFLLIDETYREAVHGDAAPRPSLVGRDRRIISCASFSKCHGAPGIRTGWVITRDPALRAQ LVLGKFNTTISNSVVDEAIALRILRELDTIMRDRRGHLAACLARTAAFVADNGKLIEWIRPEAGALCCVRLRREMFDEAA VARFHRELSVRETRVAPGSWFGDEARVFRLGFGVLALPELDEALQRVAQTLTSASMMTV
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507369, Length=238, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1787710, Length=232, Percent_Identity=27.1551724137931, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790797, Length=347, Percent_Identity=25.9365994236311, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1786816, Length=198, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=7e-12, Organism=Drosophila melanogaster, GI18859735, Length=226, Percent_Identity=25.6637168141593, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 41334; Mature: 41203
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVPSRFPHNDIISLTTQPVCYDLAESIGPDLRLGGLLTDSDALQELVLSYGPTEGHAE CCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEECCEECCHHHHHHHHHHCCCCCCHHH LRELIAARHGVGADDVITTVGGMQALFLIAFVLGEPGAEAVIGRPAFPNARNVLASVGLR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHH VIDLMLHFDDGYRLDTGRLRSLLSARTRLVSLASPQNPSGVALSDAELRDVLAAMDEICP HHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHCC EAFLLIDETYREAVHGDAAPRPSLVGRDRRIISCASFSKCHGAPGIRTGWVITRDPALRA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCEEEECCCHHHH QLVLGKFNTTISNSVVDEAIALRILRELDTIMRDRRGHLAACLARTAAFVADNGKLIEWI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEE RPEAGALCCVRLRREMFDEAAVARFHRELSVRETRVAPGSWFGDEARVFRLGFGVLALPE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHCCCH LDEALQRVAQTLTSASMMTV HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PHVPSRFPHNDIISLTTQPVCYDLAESIGPDLRLGGLLTDSDALQELVLSYGPTEGHAE CCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCEECCEECCHHHHHHHHHHCCCCCCHHH LRELIAARHGVGADDVITTVGGMQALFLIAFVLGEPGAEAVIGRPAFPNARNVLASVGLR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHH VIDLMLHFDDGYRLDTGRLRSLLSARTRLVSLASPQNPSGVALSDAELRDVLAAMDEICP HHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHCC EAFLLIDETYREAVHGDAAPRPSLVGRDRRIISCASFSKCHGAPGIRTGWVITRDPALRA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCEEEECCCHHHH QLVLGKFNTTISNSVVDEAIALRILRELDTIMRDRRGHLAACLARTAAFVADNGKLIEWI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEE RPEAGALCCVRLRREMFDEAAVARFHRELSVRETRVAPGSWFGDEARVFRLGFGVLALPE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHCCCH LDEALQRVAQTLTSASMMTV HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]